GCF_003470435.1_ASM347043v1_genomic - 4 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_QRIH01000012 (original name was: NZ_QRIH01000012.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	RRE-containing	28,954	49,220

NZ_QRIH01000015 (original name was: NZ_QRIH01000015.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	ranthipeptide	52,027	65,166

NZ_QRIH01000049 (original name was: NZ_QRIH01000049.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 44.1	cyclic-lactone-autoinducer	1	14,715

NZ_QRIH01000005 (original name was: NZ_QRIH01000005.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 45.1	RRE-containing	45,210	65,491

Region	Type	From	To	Similarity
Region 4.1	RRE-containing	28,954	49,220
Region 7.1	ranthipeptide	52,027	65,166
Region 44.1	cyclic-lactone-autoinducer	1	14,715
Region 45.1	RRE-containing	45,210	65,491

No secondary metabolite regions were found in these records:: NZ_QRIH01000001 (original name was: NZ_QRIH01000001.1); NZ_QRIH01000010 (original name was: NZ_QRIH01000010.1); NZ_QRIH01000011 (original name was: NZ_QRIH01000011.1); NZ_QRIH01000013 (original name was: NZ_QRIH01000013.1); NZ_QRIH01000014 (original name was: NZ_QRIH01000014.1); NZ_QRIH01000016 (original name was: NZ_QRIH01000016.1); NZ_QRIH01000017 (original name was: NZ_QRIH01000017.1); NZ_QRIH01000018 (original name was: NZ_QRIH01000018.1); NZ_QRIH01000019 (original name was: NZ_QRIH01000019.1); NZ_QRIH01000002 (original name was: NZ_QRIH01000002.1); NZ_QRIH01000020 (original name was: NZ_QRIH01000020.1); NZ_QRIH01000021 (original name was: NZ_QRIH01000021.1); NZ_QRIH01000022 (original name was: NZ_QRIH01000022.1); NZ_QRIH01000023 (original name was: NZ_QRIH01000023.1); NZ_QRIH01000024 (original name was: NZ_QRIH01000024.1); NZ_QRIH01000025 (original name was: NZ_QRIH01000025.1); NZ_QRIH01000026 (original name was: NZ_QRIH01000026.1); NZ_QRIH01000027 (original name was: NZ_QRIH01000027.1); NZ_QRIH01000028 (original name was: NZ_QRIH01000028.1); NZ_QRIH01000029 (original name was: NZ_QRIH01000029.1); NZ_QRIH01000003 (original name was: NZ_QRIH01000003.1); NZ_QRIH01000030 (original name was: NZ_QRIH01000030.1); NZ_QRIH01000031 (original name was: NZ_QRIH01000031.1); NZ_QRIH01000032 (original name was: NZ_QRIH01000032.1); NZ_QRIH01000033 (original name was: NZ_QRIH01000033.1); NZ_QRIH01000034 (original name was: NZ_QRIH01000034.1); NZ_QRIH01000035 (original name was: NZ_QRIH01000035.1); NZ_QRIH01000036 (original name was: NZ_QRIH01000036.1); NZ_QRIH01000037 (original name was: NZ_QRIH01000037.1); NZ_QRIH01000038 (original name was: NZ_QRIH01000038.1); NZ_QRIH01000039 (original name was: NZ_QRIH01000039.1); NZ_QRIH01000004 (original name was: NZ_QRIH01000004.1); NZ_QRIH01000040 (original name was: NZ_QRIH01000040.1); NZ_QRIH01000041 (original name was: NZ_QRIH01000041.1); NZ_QRIH01000042 (original name was: NZ_QRIH01000042.1); NZ_QRIH01000043 (original name was: NZ_QRIH01000043.1); NZ_QRIH01000044 (original name was: NZ_QRIH01000044.1); NZ_QRIH01000045 (original name was: NZ_QRIH01000045.1); NZ_QRIH01000046 (original name was: NZ_QRIH01000046.1); NZ_QRIH01000047 (original name was: NZ_QRIH01000047.1); NZ_QRIH01000048 (original name was: NZ_QRIH01000048.1); NZ_QRIH01000050 (original name was: NZ_QRIH01000050.1); NZ_QRIH01000051 (original name was: NZ_QRIH01000051.1); NZ_QRIH01000052 (original name was: NZ_QRIH01000052.1); NZ_QRIH01000053 (original name was: NZ_QRIH01000053.1); NZ_QRIH01000054 (original name was: NZ_QRIH01000054.1); NZ_QRIH01000055 (original name was: NZ_QRIH01000055.1); NZ_QRIH01000056 (original name was: NZ_QRIH01000056.1); NZ_QRIH01000057 (original name was: NZ_QRIH01000057.1); NZ_QRIH01000058 (original name was: NZ_QRIH01000058.1); NZ_QRIH01000059 (original name was: NZ_QRIH01000059.1); NZ_QRIH01000006 (original name was: NZ_QRIH01000006.1); NZ_QRIH01000060 (original name was: NZ_QRIH01000060.1); NZ_QRIH01000061 (original name was: NZ_QRIH01000061.1); NZ_QRIH01000062 (original name was: NZ_QRIH01000062.1); NZ_QRIH01000063 (original name was: NZ_QRIH01000063.1); NZ_QRIH01000064 (original name was: NZ_QRIH01000064.1); NZ_QRIH01000065 (original name was: NZ_QRIH01000065.1); NZ_QRIH01000066 (original name was: NZ_QRIH01000066.1); NZ_QRIH01000067 (original name was: NZ_QRIH01000067.1); NZ_QRIH01000068 (original name was: NZ_QRIH01000068.1); NZ_QRIH01000069 (original name was: NZ_QRIH01000069.1); NZ_QRIH01000007 (original name was: NZ_QRIH01000007.1); NZ_QRIH01000070 (original name was: NZ_QRIH01000070.1); NZ_QRIH01000071 (original name was: NZ_QRIH01000071.1); NZ_QRIH01000072 (original name was: NZ_QRIH01000072.1); NZ_QRIH01000008 (original name was: NZ_QRIH01000008.1); NZ_QRIH01000009 (original name was: NZ_QRIH01000009.1)

Compact view

c00004_NZ_QRIH.. - Region 1 - RRE-containing

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Location: 28,954 - 49,220 nt. (total: 20,267 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002009.1	0.15	Polyketide	kanglemycin A, kanglemycin V1, kanglemycin V2	Amycolatopsis vancoresmycina
BGC0001441.1	0.13	Other	belactosin A, belactosin C	Streptomyces sp.
BGC0001440.1	0.12	Other	cystargolide A, cystargolide B	Kitasatospora cystarginea
BGC0001562.1	0.10	NRP	curacomycin	Streptomyces curacoi
BGC0000122.1	0.08	Polyketide	phenylnannolone A, phenylnannolone B, phenylnannolone C	Nannocystis pusilla
BGC0001371.1	0.08	NRP	echinocandin B	Aspergillus nidulans NRRL 8112
BGC0000253.1	0.07	Polyketide	oviedomycin	Streptomyces antibioticus
BGC0001569.1	0.07	NRP	dechlorocuracomycin	Streptomyces noursei ATCC 11455
BGC0001095.1	0.06	NRP	fengycin	Bacillus velezensis FZB42
BGC0001035.1	0.06	Other (Aminocoumarin), Polyketide, NRP	pneumocandin B0, pneumocandin A0	Glarea lozoyensis ATCC 20868

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002009.1	0.45	Polyketide	kanglemycin A, kanglemycin V1, kanglemycin V2	Amycolatopsis vancoresmycina
BGC0001441.1	0.41	Other	belactosin A, belactosin C	Streptomyces sp.
BGC0001440.1	0.39	Other	cystargolide A, cystargolide B	Kitasatospora cystarginea
BGC0001562.1	0.37	NRP	curacomycin	Streptomyces curacoi
BGC0000122.1	0.32	Polyketide	phenylnannolone A, phenylnannolone B, phenylnannolone C	Nannocystis pusilla
BGC0001371.1	0.32	NRP	echinocandin B	Aspergillus nidulans NRRL 8112
BGC0000253.1	0.29	Polyketide	oviedomycin	Streptomyces antibioticus
BGC0001569.1	0.28	NRP	dechlorocuracomycin	Streptomyces noursei ATCC 11455
BGC0001095.1	0.27	NRP	fengycin	Bacillus velezensis FZB42
BGC0001035.1	0.27	Other (Aminocoumarin), Polyketide, NRP	pneumocandin B0, pneumocandin A0	Glarea lozoyensis ATCC 20868

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00007_NZ_QRIH.. - Region 1 - ranthipeptide

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Location: 52,027 - 65,166 nt. (total: 13,140 nt) Show pHMM detection rules used

Region on contig edge.

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001540.1	0.14	Other	CC-1065	Streptomyces zelensis
BGC0001607.1	0.14	Other	gilvusmycin	Streptomyces sp. NRRL B-1347
BGC0000466.1	0.14	NRP	yatakemycin	Streptomyces sp. TP-A2060
BGC0000807.1	0.10	Saccharide	phosphonoglycans	Stackebrandtia nassauensis DSM 44728
BGC0000604.1	0.08	RiPP	GE2270A	Nonomuraea sp. WU8817
BGC0001155.1	0.08	RiPP	GE2270	Planobispora rosea
BGC0001591.1	0.07	Other	fatty acid enol ester	uncultured bacterium CSLC2
BGC0001688.1	0.07	Other	N-tetradecanoyl tyrosine	uncultured bacterium CSLC2
BGC0001048.1	0.04	NRP, Polyketide, Saccharide	tallysomycin A	Streptoalloteichus hindustanus
BGC0000963.1	0.04	NRP, Polyketide, Saccharide	bleomycin	Streptomyces verticillus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001540.1	0.44	Other	CC-1065	Streptomyces zelensis
BGC0001607.1	0.44	Other	gilvusmycin	Streptomyces sp. NRRL B-1347
BGC0000466.1	0.43	NRP	yatakemycin	Streptomyces sp. TP-A2060
BGC0000807.1	0.35	Saccharide	phosphonoglycans	Stackebrandtia nassauensis DSM 44728
BGC0000604.1	0.31	RiPP	GE2270A	Nonomuraea sp. WU8817
BGC0001155.1	0.30	RiPP	GE2270	Planobispora rosea
BGC0001591.1	0.28	Other	fatty acid enol ester	uncultured bacterium CSLC2
BGC0001688.1	0.28	Other	N-tetradecanoyl tyrosine	uncultured bacterium CSLC2
BGC0001048.1	0.18	NRP, Polyketide, Saccharide	tallysomycin A	Streptoalloteichus hindustanus
BGC0000963.1	0.17	NRP, Polyketide, Saccharide	bleomycin	Streptomyces verticillus

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00044_NZ_QRIH.. - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 14,715 nt. (total: 14,715 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000488.1	0.17	RiPP	circularin A	Clostridium beijerinckii
BGC0000616.1	0.16	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0001229.1	0.16	RiPP	SBI-06990 A1, SBI-06989 A2	Streptomyces bingchenggensis BCW-1
BGC0001222.1	0.16	RiPP	acidocin B	Lactobacillus acidophilus
BGC0000491.1	0.16	RiPP	gassericin A	Lactobacillus gasseri
BGC0000522.1	0.16	RiPP	lacticin Z	Lactococcus lactis
BGC0000558.1	0.16	RiPP	sublancin 168	Bacillus subtilis subsp. subtilis str. 168
BGC0001863.1	0.16	RiPP, Terpene	bacillicn CER074	Bacillus mycoides
BGC0000620.1	0.16	RiPP	lacticin Q	Lactococcus lactis
BGC0001551.1	0.16	RiPP	citrulassin E	Streptomyces glaucescens

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000488.1	0.49	RiPP	circularin A	Clostridium beijerinckii
BGC0000616.1	0.47	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0001229.1	0.47	RiPP	SBI-06990 A1, SBI-06989 A2	Streptomyces bingchenggensis BCW-1
BGC0001222.1	0.46	RiPP	acidocin B	Lactobacillus acidophilus
BGC0000491.1	0.46	RiPP	gassericin A	Lactobacillus gasseri
BGC0000522.1	0.46	RiPP	lacticin Z	Lactococcus lactis
BGC0000558.1	0.46	RiPP	sublancin 168	Bacillus subtilis subsp. subtilis str. 168
BGC0001863.1	0.46	RiPP, Terpene	bacillicn CER074	Bacillus mycoides
BGC0000620.1	0.46	RiPP	lacticin Q	Lactococcus lactis
BGC0001551.1	0.46	RiPP	citrulassin E	Streptomyces glaucescens

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

c00045_NZ_QRIH.. - Region 1 - RRE-containing

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Location: 45,210 - 65,491 nt. (total: 20,282 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001634.1	0.16	RiPP	keywimysin	Streptomyces sp. NRRL F-5702
BGC0001176.1	0.16	RiPP	streptomonomicin	Streptomonospora alba
BGC0000575.1	0.16	RiPP	lariatin	Rhodococcus jostii
BGC0000548.1	0.15	RiPP	salivaricin A	Streptococcus salivarius
BGC0001222.1	0.15	RiPP	acidocin B	Lactobacillus acidophilus
BGC0001743.1	0.15	RiPP	plantaricyclin	Lactobacillus plantarum
BGC0000491.1	0.15	RiPP	gassericin A	Lactobacillus gasseri
BGC0001120.1	0.15	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000916.1	0.15	Other	molybdenum cofactor	Staphylococcus carnosus
BGC0000703.1	0.15	Saccharide	kanamycin	Streptomyces kanamyceticus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001634.1	0.47	RiPP	keywimysin	Streptomyces sp. NRRL F-5702
BGC0001176.1	0.46	RiPP	streptomonomicin	Streptomonospora alba
BGC0000575.1	0.46	RiPP	lariatin	Rhodococcus jostii
BGC0000548.1	0.46	RiPP	salivaricin A	Streptococcus salivarius
BGC0001222.1	0.46	RiPP	acidocin B	Lactobacillus acidophilus
BGC0001743.1	0.46	RiPP	plantaricyclin	Lactobacillus plantarum
BGC0000491.1	0.46	RiPP	gassericin A	Lactobacillus gasseri
BGC0001120.1	0.46	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000916.1	0.45	Other	molybdenum cofactor	Staphylococcus carnosus
BGC0000703.1	0.44	Saccharide	kanamycin	Streptomyces kanamyceticus

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names