GCF_004342485.1_ASM434248v1_genomic - 9 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_SMBU01000001 (original name was: NZ_SMBU01000001.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	indole	1	19,661
Region 1.2	RiPP-like	281,236	292,063

NZ_SMBU01000010 (original name was: NZ_SMBU01000010.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	terpene	2,672	24,341

NZ_SMBU01000011 (original name was: NZ_SMBU01000011.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	hserlactone	61,477	82,223

NZ_SMBU01000015 (original name was: NZ_SMBU01000015.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 15.1	redox-cofactor	90,375	112,483

NZ_SMBU01000019 (original name was: NZ_SMBU01000019.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 19.1	RiPP-like	21,382	32,236

NZ_SMBU01000027 (original name was: NZ_SMBU01000027.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 27.1	acyl_amino_acids	37,038	73,039

NZ_SMBU01000040 (original name was: NZ_SMBU01000040.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 40.1	acyl_amino_acids	1	36,885

NZ_SMBU01000060 (original name was: NZ_SMBU01000060.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 60.1	lassopeptide	2,212	19,557	rubrivinodin	RiPP:Lassopeptide	40%

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	indole	1	19,661
Region 1.2	RiPP-like	281,236	292,063
Region 10.1	terpene	2,672	24,341
Region 11.1	hserlactone	61,477	82,223
Region 15.1	redox-cofactor	90,375	112,483
Region 19.1	RiPP-like	21,382	32,236
Region 27.1	acyl_amino_acids	37,038	73,039
Region 40.1	acyl_amino_acids	1	36,885
Region 60.1	lassopeptide	2,212	19,557	rubrivinodin	RiPP:Lassopeptide	40%

No secondary metabolite regions were found in these records:: NZ_SMBU01000002 (original name was: NZ_SMBU01000002.1); NZ_SMBU01000003 (original name was: NZ_SMBU01000003.1); NZ_SMBU01000004 (original name was: NZ_SMBU01000004.1); NZ_SMBU01000005 (original name was: NZ_SMBU01000005.1); NZ_SMBU01000006 (original name was: NZ_SMBU01000006.1); NZ_SMBU01000007 (original name was: NZ_SMBU01000007.1); NZ_SMBU01000008 (original name was: NZ_SMBU01000008.1); NZ_SMBU01000009 (original name was: NZ_SMBU01000009.1); NZ_SMBU01000012 (original name was: NZ_SMBU01000012.1); NZ_SMBU01000013 (original name was: NZ_SMBU01000013.1); NZ_SMBU01000014 (original name was: NZ_SMBU01000014.1); NZ_SMBU01000016 (original name was: NZ_SMBU01000016.1); NZ_SMBU01000017 (original name was: NZ_SMBU01000017.1); NZ_SMBU01000018 (original name was: NZ_SMBU01000018.1); NZ_SMBU01000020 (original name was: NZ_SMBU01000020.1); NZ_SMBU01000021 (original name was: NZ_SMBU01000021.1); NZ_SMBU01000022 (original name was: NZ_SMBU01000022.1); NZ_SMBU01000023 (original name was: NZ_SMBU01000023.1); NZ_SMBU01000024 (original name was: NZ_SMBU01000024.1); NZ_SMBU01000025 (original name was: NZ_SMBU01000025.1); NZ_SMBU01000026 (original name was: NZ_SMBU01000026.1); NZ_SMBU01000028 (original name was: NZ_SMBU01000028.1); NZ_SMBU01000029 (original name was: NZ_SMBU01000029.1); NZ_SMBU01000030 (original name was: NZ_SMBU01000030.1); NZ_SMBU01000031 (original name was: NZ_SMBU01000031.1); NZ_SMBU01000032 (original name was: NZ_SMBU01000032.1); NZ_SMBU01000033 (original name was: NZ_SMBU01000033.1); NZ_SMBU01000034 (original name was: NZ_SMBU01000034.1); NZ_SMBU01000035 (original name was: NZ_SMBU01000035.1); NZ_SMBU01000036 (original name was: NZ_SMBU01000036.1); NZ_SMBU01000037 (original name was: NZ_SMBU01000037.1); NZ_SMBU01000038 (original name was: NZ_SMBU01000038.1); NZ_SMBU01000039 (original name was: NZ_SMBU01000039.1); NZ_SMBU01000041 (original name was: NZ_SMBU01000041.1); NZ_SMBU01000042 (original name was: NZ_SMBU01000042.1); NZ_SMBU01000043 (original name was: NZ_SMBU01000043.1); NZ_SMBU01000044 (original name was: NZ_SMBU01000044.1); NZ_SMBU01000045 (original name was: NZ_SMBU01000045.1); NZ_SMBU01000046 (original name was: NZ_SMBU01000046.1); NZ_SMBU01000047 (original name was: NZ_SMBU01000047.1); NZ_SMBU01000048 (original name was: NZ_SMBU01000048.1); NZ_SMBU01000049 (original name was: NZ_SMBU01000049.1); NZ_SMBU01000050 (original name was: NZ_SMBU01000050.1); NZ_SMBU01000051 (original name was: NZ_SMBU01000051.1); NZ_SMBU01000052 (original name was: NZ_SMBU01000052.1); NZ_SMBU01000053 (original name was: NZ_SMBU01000053.1); NZ_SMBU01000054 (original name was: NZ_SMBU01000054.1); NZ_SMBU01000055 (original name was: NZ_SMBU01000055.1); NZ_SMBU01000056 (original name was: NZ_SMBU01000056.1); NZ_SMBU01000057 (original name was: NZ_SMBU01000057.1); NZ_SMBU01000058 (original name was: NZ_SMBU01000058.1); NZ_SMBU01000059 (original name was: NZ_SMBU01000059.1); NZ_SMBU01000061 (original name was: NZ_SMBU01000061.1); NZ_SMBU01000062 (original name was: NZ_SMBU01000062.1); NZ_SMBU01000063 (original name was: NZ_SMBU01000063.1); NZ_SMBU01000064 (original name was: NZ_SMBU01000064.1); NZ_SMBU01000065 (original name was: NZ_SMBU01000065.1); NZ_SMBU01000066 (original name was: NZ_SMBU01000066.1); NZ_SMBU01000067 (original name was: NZ_SMBU01000067.1); NZ_SMBU01000068 (original name was: NZ_SMBU01000068.1); NZ_SMBU01000069 (original name was: NZ_SMBU01000069.1); NZ_SMBU01000070 (original name was: NZ_SMBU01000070.1); NZ_SMBU01000071 (original name was: NZ_SMBU01000071.1); NZ_SMBU01000072 (original name was: NZ_SMBU01000072.1); NZ_SMBU01000073 (original name was: NZ_SMBU01000073.1); NZ_SMBU01000074 (original name was: NZ_SMBU01000074.1); NZ_SMBU01000075 (original name was: NZ_SMBU01000075.1); NZ_SMBU01000076 (original name was: NZ_SMBU01000076.1); NZ_SMBU01000077 (original name was: NZ_SMBU01000077.1); NZ_SMBU01000078 (original name was: NZ_SMBU01000078.1); NZ_SMBU01000079 (original name was: NZ_SMBU01000079.1); NZ_SMBU01000080 (original name was: NZ_SMBU01000080.1); NZ_SMBU01000081 (original name was: NZ_SMBU01000081.1); NZ_SMBU01000082 (original name was: NZ_SMBU01000082.1); NZ_SMBU01000083 (original name was: NZ_SMBU01000083.1); NZ_SMBU01000084 (original name was: NZ_SMBU01000084.1); NZ_SMBU01000085 (original name was: NZ_SMBU01000085.1); NZ_SMBU01000086 (original name was: NZ_SMBU01000086.1); NZ_SMBU01000087 (original name was: NZ_SMBU01000087.1); NZ_SMBU01000088 (original name was: NZ_SMBU01000088.1); NZ_SMBU01000089 (original name was: NZ_SMBU01000089.1); NZ_SMBU01000090 (original name was: NZ_SMBU01000090.1); NZ_SMBU01000091 (original name was: NZ_SMBU01000091.1); NZ_SMBU01000092 (original name was: NZ_SMBU01000092.1); NZ_SMBU01000093 (original name was: NZ_SMBU01000093.1); NZ_SMBU01000094 (original name was: NZ_SMBU01000094.1); NZ_SMBU01000095 (original name was: NZ_SMBU01000095.1); NZ_SMBU01000096 (original name was: NZ_SMBU01000096.1); NZ_SMBU01000097 (original name was: NZ_SMBU01000097.1); NZ_SMBU01000098 (original name was: NZ_SMBU01000098.1); NZ_SMBU01000099 (original name was: NZ_SMBU01000099.1); NZ_SMBU01000100 (original name was: NZ_SMBU01000100.1); NZ_SMBU01000101 (original name was: NZ_SMBU01000101.1); NZ_SMBU01000102 (original name was: NZ_SMBU01000102.1); NZ_SMBU01000103 (original name was: NZ_SMBU01000103.1); NZ_SMBU01000104 (original name was: NZ_SMBU01000104.1); NZ_SMBU01000105 (original name was: NZ_SMBU01000105.1); NZ_SMBU01000106 (original name was: NZ_SMBU01000106.1); NZ_SMBU01000107 (original name was: NZ_SMBU01000107.1); NZ_SMBU01000108 (original name was: NZ_SMBU01000108.1)

Compact view

c00001_NZ_SMBU.. - Region 1 - indole

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Location: 1 - 19,661 nt. (total: 19,661 nt) Show pHMM detection rules used

Region on contig edge.

indole: (indsynth or dmat or indole_PTase)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000923.1	0.14	Other	paerucumarin	Pseudomonas aeruginosa PAO1
BGC0001224.1	0.14	Other	reductasporine	uncultured bacterium
BGC0000595.1	0.14	RiPP	SCO-2138	Streptomyces coelicolor A3(2)
BGC0000596.1	0.14	RiPP	SLI-2138	Streptomyces lividans TK24
BGC0000703.1	0.14	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0000043.1	0.11	Polyketide	curacin A	Moorea producens 19L
BGC0002026.1	0.06	NRP	thaxteramide A1, thaxteramide A2, thaxteramide B1, thaxteramide B2	Jahnella sp. MSr9139
BGC0002007.1	0.06	Terpene	atolypene A, atolypene B	Amycolatopsis tolypomycina
BGC0000709.1	0.05	Saccharide	neomycin	Streptomyces fradiae ATCC 10745 = DSM 40063
BGC0000997.1	0.05	NRP, Polyketide	glidobactin	[Polyangium] brachysporum

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000923.1	0.44	Other	paerucumarin	Pseudomonas aeruginosa PAO1
BGC0001224.1	0.44	Other	reductasporine	uncultured bacterium
BGC0000595.1	0.43	RiPP	SCO-2138	Streptomyces coelicolor A3(2)
BGC0000596.1	0.43	RiPP	SLI-2138	Streptomyces lividans TK24
BGC0000703.1	0.43	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0000043.1	0.37	Polyketide	curacin A	Moorea producens 19L
BGC0002026.1	0.27	NRP	thaxteramide A1, thaxteramide A2, thaxteramide B1, thaxteramide B2	Jahnella sp. MSr9139
BGC0002007.1	0.26	Terpene	atolypene A, atolypene B	Amycolatopsis tolypomycina
BGC0000709.1	0.22	Saccharide	neomycin	Streptomyces fradiae ATCC 10745 = DSM 40063
BGC0000997.1	0.21	NRP, Polyketide	glidobactin	[Polyangium] brachysporum

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00001_NZ_SMBU.. - Region 2 - RiPP-like

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Location: 281,236 - 292,063 nt. (total: 10,828 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001476.1	0.11	Other (Nucleoside)	pseudouridimycin	Streptomyces sp.
BGC0001636.1	0.09	NRP	KK-1	Curvularia clavata
BGC0001739.1	0.08	Other	phosphonoacetic Acid	Streptomyces sp. NRRL F-525
BGC0000937.1	0.08	Other	fosfazinomycin A	Streptomyces sp. WM6372
BGC0000407.1	0.06	NRP	plipastatin	Bacillus subtilis subsp. subtilis
BGC0001103.1	0.06	NRP, Polyketide	mycosubtilin	Bacillus subtilis subsp. spizizenii ATCC 6633
BGC0000261.1	0.05	Polyketide	R1128	Streptomyces sp. R1128
BGC0001800.1	0.05	NRP, Polyketide	theonellamide	Candidatus Entotheonella serta
BGC0001964.1	0.05	Polyketide	alkylpyrone-407, alkylpyrone-393	Cystobacterineae bacterium
BGC0001497.1	0.05	Polyketide	actinonin	Streptomyces sp.

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001476.1	0.38	Other (Nucleoside)	pseudouridimycin	Streptomyces sp.
BGC0001636.1	0.34	NRP	KK-1	Curvularia clavata
BGC0001739.1	0.31	Other	phosphonoacetic Acid	Streptomyces sp. NRRL F-525
BGC0000937.1	0.30	Other	fosfazinomycin A	Streptomyces sp. WM6372
BGC0000407.1	0.26	NRP	plipastatin	Bacillus subtilis subsp. subtilis
BGC0001103.1	0.26	NRP, Polyketide	mycosubtilin	Bacillus subtilis subsp. spizizenii ATCC 6633
BGC0000261.1	0.23	Polyketide	R1128	Streptomyces sp. R1128
BGC0001800.1	0.23	NRP, Polyketide	theonellamide	Candidatus Entotheonella serta
BGC0001964.1	0.23	Polyketide	alkylpyrone-407, alkylpyrone-393	Cystobacterineae bacterium
BGC0001497.1	0.22	Polyketide	actinonin	Streptomyces sp.

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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c00010_NZ_SMBU.. - Region 1 - terpene

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Location: 2,672 - 24,341 nt. (total: 21,670 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.33	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000648.1	0.29	Terpene	carotenoid	Myxococcus xanthus
BGC0000634.1	0.24	Terpene	carotenoid	Brevundimonas sp. SD212
BGC0001859.1	0.24	Other (Phosphonate)	fosfomycin	Pseudomonas syringae
BGC0000656.1	0.24	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000643.1	0.24	Terpene	carotenoid	Brevundimonas vesicularis
BGC0000630.1	0.23	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000640.1	0.23	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000904.1	0.21	Other	FR-900098	Streptomyces rubellomurinus
BGC0000646.1	0.21	Terpene	β-carotein	uncultured bacterium

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.66	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000648.1	0.63	Terpene	carotenoid	Myxococcus xanthus
BGC0000634.1	0.57	Terpene	carotenoid	Brevundimonas sp. SD212
BGC0001859.1	0.57	Other (Phosphonate)	fosfomycin	Pseudomonas syringae
BGC0000656.1	0.57	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000643.1	0.57	Terpene	carotenoid	Brevundimonas vesicularis
BGC0000630.1	0.57	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000640.1	0.56	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000904.1	0.54	Other	FR-900098	Streptomyces rubellomurinus
BGC0000646.1	0.53	Terpene	β-carotein	uncultured bacterium

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00011_NZ_SMBU.. - Region 1 - hserlactone

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Location: 61,477 - 82,223 nt. (total: 20,747 nt) Show pHMM detection rules used

hserlactone: Autoind_synth

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000503.1	0.17	RiPP	cinnamycin	Streptomyces cinnamoneus
BGC0001586.1	0.16	Saccharide	EPS273	Pseudomonas stutzeri
BGC0000528.1	0.16	RiPP	michiganin A	Clavibacter michiganensis subsp. michiganensis NCPPB 382
BGC0000923.1	0.14	Other	paerucumarin	Pseudomonas aeruginosa PAO1
BGC0000932.1	0.09	Other	tropodithietic acid	Phaeobacter inhibens DSM 17395
BGC0001362.1	0.09	Other	tropodithietic acid	Phaeobacter inhibens DSM 17395
BGC0001669.1	0.09	RiPP	microvionin	Microbacterium arborescens
BGC0000495.1	0.09	RiPP	actagardine	Actinoplanes garbadinensis
BGC0000340.1	0.08	NRP	echoside A, echoside B, echoside C, echoside D, echoside E	Streptomyces sp. LZ35
BGC0001281.1	0.08	Polyketide	ustilagic acid	Ustilago maydis 521

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000503.1	0.48	RiPP	cinnamycin	Streptomyces cinnamoneus
BGC0001586.1	0.47	Saccharide	EPS273	Pseudomonas stutzeri
BGC0000528.1	0.47	RiPP	michiganin A	Clavibacter michiganensis subsp. michiganensis NCPPB 382
BGC0000923.1	0.43	Other	paerucumarin	Pseudomonas aeruginosa PAO1
BGC0000932.1	0.34	Other	tropodithietic acid	Phaeobacter inhibens DSM 17395
BGC0001362.1	0.34	Other	tropodithietic acid	Phaeobacter inhibens DSM 17395
BGC0001669.1	0.33	RiPP	microvionin	Microbacterium arborescens
BGC0000495.1	0.33	RiPP	actagardine	Actinoplanes garbadinensis
BGC0000340.1	0.30	NRP	echoside A, echoside B, echoside C, echoside D, echoside E	Streptomyces sp. LZ35
BGC0001281.1	0.30	Polyketide	ustilagic acid	Ustilago maydis 521

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00015_NZ_SMBU.. - Region 1 - redox-cofactor

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Location: 90,375 - 112,483 nt. (total: 22,109 nt) Show pHMM detection rules used

redox-cofactor: (cds(PF04055 and (TIGR04085 or SPASM)) and (TIGR02111 or TIGR03966) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000917.1	0.18	Other	molybdenum cofactor	Rhodobacter capsulatus
BGC0000925.1	0.16	Other	quinolobactin	Pseudomonas fluorescens
BGC0000503.1	0.16	RiPP	cinnamycin	Streptomyces cinnamoneus
BGC0000841.1	0.16	Other (Non-NRP beta-lactam)	alanylclavam, 2-hydroxymethylclavam, 2-formyloxymethylclavam, clavam-2-carboxylate, clavulanic acid	Streptomyces clavuligerus ATCC 27064
BGC0000842.1	0.16	Other (Non-NRP beta-lactam)	carbapenem MM4550	Streptomyces argenteolus
BGC0000573.1	0.15	RiPP	caulonodin I, caulonodin II	Caulobacter sp. K31
BGC0000576.1	0.15	RiPP	rubrivinodin	Rubrivivax gelatinosus IL144
BGC0001786.1	0.15	RiPP	subterisin	Novosphingobium subterraneum
BGC0000883.1	0.15	Other	arginomycin	Streptomyces arginensis
BGC0001586.1	0.15	Saccharide	EPS273	Pseudomonas stutzeri

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000917.1	0.49	Other	molybdenum cofactor	Rhodobacter capsulatus
BGC0000925.1	0.47	Other	quinolobactin	Pseudomonas fluorescens
BGC0000503.1	0.47	RiPP	cinnamycin	Streptomyces cinnamoneus
BGC0000841.1	0.46	Other (Non-NRP beta-lactam)	alanylclavam, 2-hydroxymethylclavam, 2-formyloxymethylclavam, clavam-2-carboxylate, clavulanic acid	Streptomyces clavuligerus ATCC 27064
BGC0000842.1	0.46	Other (Non-NRP beta-lactam)	carbapenem MM4550	Streptomyces argenteolus
BGC0000573.1	0.46	RiPP	caulonodin I, caulonodin II	Caulobacter sp. K31
BGC0000576.1	0.46	RiPP	rubrivinodin	Rubrivivax gelatinosus IL144
BGC0001786.1	0.45	RiPP	subterisin	Novosphingobium subterraneum
BGC0000883.1	0.45	Other	arginomycin	Streptomyces arginensis
BGC0001586.1	0.45	Saccharide	EPS273	Pseudomonas stutzeri

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00019_NZ_SMBU.. - Region 1 - RiPP-like

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Location: 21,382 - 32,236 nt. (total: 10,855 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001654.1	0.14	Saccharide	lipooligosaccharide	Bacteroides thetaiotaomicron VPI-5482
BGC0001184.1	0.07	Other	bacilysin	Bacillus velezensis FZB42
BGC0001285.1	0.06	Other (Fatty acid)	pseudopyronine A, pseudopyronine B	Pseudomonas putida
BGC0000254.1	0.04	Polyketide	oxytetracycline	Streptomyces rimosus
BGC0001964.1	0.04	Polyketide	alkylpyrone-407, alkylpyrone-393	Cystobacterineae bacterium
BGC0000982.1	0.04	NRP, Polyketide	cystothiazole A	Cystobacter fuscus
BGC0000434.1	0.04	NRP	SW-163C, UK-63598, SW-163E, SW-163F, SW-163G	Streptomyces sp. SNA15896
BGC0000240.1	0.04	Polyketide, Saccharide	lomaiviticin A, lomaiviticin C, lomaiviticin D, lomaiviticin E	Salinispora pacifica

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001654.1	0.43	Saccharide	lipooligosaccharide	Bacteroides thetaiotaomicron VPI-5482
BGC0001184.1	0.29	Other	bacilysin	Bacillus velezensis FZB42
BGC0001285.1	0.25	Other (Fatty acid)	pseudopyronine A, pseudopyronine B	Pseudomonas putida
BGC0000254.1	0.20	Polyketide	oxytetracycline	Streptomyces rimosus
BGC0001964.1	0.19	Polyketide	alkylpyrone-407, alkylpyrone-393	Cystobacterineae bacterium
BGC0000982.1	0.19	NRP, Polyketide	cystothiazole A	Cystobacter fuscus
BGC0000434.1	0.19	NRP	SW-163C, UK-63598, SW-163E, SW-163F, SW-163G	Streptomyces sp. SNA15896
BGC0000240.1	0.18	Polyketide, Saccharide	lomaiviticin A, lomaiviticin C, lomaiviticin D, lomaiviticin E	Salinispora pacifica

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00027_NZ_SMBU.. - Region 1 - acyl_amino_acids

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Location: 37,038 - 73,039 nt. (total: 36,002 nt) Show pHMM detection rules used

Region on contig edge.

acyl_amino_acids: NasY

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000924.1	0.21	Other	pyrrolnitrin	Pseudomonas chlororaphis
BGC0000782.1	0.19	Saccharide	O-antigen	Burkholderia pseudomallei 1026b
BGC0000785.1	0.19	Saccharide	O-antigen	Burkholderia mallei
BGC0001336.1	0.16	Alkaloid	erdasporine A, erdasporine B, erdasporine C	uncultured bacterium
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001779.1	0.16	RiPP	siamycin	Streptomyces nodosus
BGC0001364.1	0.16	RiPP	cinnamycin B	Actinomadura atramentaria DSM 43919
BGC0001591.1	0.16	Other	fatty acid enol ester	uncultured bacterium CSLC2
BGC0001688.1	0.16	Other	N-tetradecanoyl tyrosine	uncultured bacterium CSLC2
BGC0000550.1	0.16	RiPP	salivaricin G32	Streptococcus salivarius

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000924.1	0.54	Other	pyrrolnitrin	Pseudomonas chlororaphis
BGC0000782.1	0.51	Saccharide	O-antigen	Burkholderia pseudomallei 1026b
BGC0000785.1	0.50	Saccharide	O-antigen	Burkholderia mallei
BGC0001336.1	0.47	Alkaloid	erdasporine A, erdasporine B, erdasporine C	uncultured bacterium
BGC0000554.1	0.47	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001779.1	0.47	RiPP	siamycin	Streptomyces nodosus
BGC0001364.1	0.47	RiPP	cinnamycin B	Actinomadura atramentaria DSM 43919
BGC0001591.1	0.47	Other	fatty acid enol ester	uncultured bacterium CSLC2
BGC0001688.1	0.47	Other	N-tetradecanoyl tyrosine	uncultured bacterium CSLC2
BGC0000550.1	0.46	RiPP	salivaricin G32	Streptococcus salivarius

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00040_NZ_SMBU.. - Region 1 - acyl_amino_acids

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Location: 1 - 36,885 nt. (total: 36,885 nt) Show pHMM detection rules used

Region on contig edge.

acyl_amino_acids: NasY

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001191.1	0.25	Other	A-102395	Amycolatopsis sp. SANK 60206
BGC0002007.1	0.19	Terpene	atolypene A, atolypene B	Amycolatopsis tolypomycina
BGC0000780.1	0.18	Saccharide	O&K-antigen	Vibrio parahaemolyticus
BGC0000761.1	0.17	Saccharide	exopolysaccharide	Methylobacillus sp. 12S
BGC0000466.1	0.17	NRP	yatakemycin	Streptomyces sp. TP-A2060
BGC0000729.1	0.17	Saccharide	capsular polysaccharide	Klebsiella pneumoniae
BGC0001120.1	0.17	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000728.1	0.17	Saccharide	capsular polysaccharide	Klebsiella pneumoniae subsp. ozaenae
BGC0001894.1	0.17	Saccharide	heteropolysaccharide (HePS)	Lactobacillus plantarum
BGC0000842.1	0.17	Other (Non-NRP beta-lactam)	carbapenem MM4550	Streptomyces argenteolus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001191.1	0.59	Other	A-102395	Amycolatopsis sp. SANK 60206
BGC0002007.1	0.51	Terpene	atolypene A, atolypene B	Amycolatopsis tolypomycina
BGC0000780.1	0.50	Saccharide	O&K-antigen	Vibrio parahaemolyticus
BGC0000761.1	0.48	Saccharide	exopolysaccharide	Methylobacillus sp. 12S
BGC0000466.1	0.48	NRP	yatakemycin	Streptomyces sp. TP-A2060
BGC0000729.1	0.48	Saccharide	capsular polysaccharide	Klebsiella pneumoniae
BGC0001120.1	0.48	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000728.1	0.48	Saccharide	capsular polysaccharide	Klebsiella pneumoniae subsp. ozaenae
BGC0001894.1	0.48	Saccharide	heteropolysaccharide (HePS)	Lactobacillus plantarum
BGC0000842.1	0.47	Other (Non-NRP beta-lactam)	carbapenem MM4550	Streptomyces argenteolus

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00060_NZ_SMBU.. - Region 1 - lassopeptide

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Location: 2,212 - 19,557 nt. (total: 17,346 nt) Show pHMM detection rules used

Region on contig edge.

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Lasso peptides

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000576.1	0.39	RiPP	rubrivinodin	Rubrivivax gelatinosus IL144
BGC0000580.1	0.32	RiPP	xanthomonin I, xanthomonin II	Xanthomonas gardneri ATCC 19865
BGC0000571.1	0.32	RiPP	burhizin	Paraburkholderia rhizoxinica HKI 454
BGC0000577.1	0.28	RiPP	sphingonodin II	Sphingobium japonicum UT26S
BGC0001494.1	0.27	RiPP	acinetodin	Acinetobacter gyllenbergii CIP 110306
BGC0000572.1	0.26	RiPP	capistruin	Burkholderia thailandensis E444
BGC0000581.1	0.22	RiPP	microcin J25	Escherichia coli
BGC0000573.1	0.21	RiPP	caulonodin I, caulonodin II	Caulobacter sp. K31
BGC0001889.1	0.21	RiPP	fusilassin	Thermobifida fusca YX
BGC0001496.1	0.21	RiPP	actinokineosin	Actinokineospora spheciospongiae

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000576.1	0.71	RiPP	rubrivinodin	Rubrivivax gelatinosus IL144
BGC0000580.1	0.65	RiPP	xanthomonin I, xanthomonin II	Xanthomonas gardneri ATCC 19865
BGC0000571.1	0.65	RiPP	burhizin	Paraburkholderia rhizoxinica HKI 454
BGC0000577.1	0.61	RiPP	sphingonodin II	Sphingobium japonicum UT26S
BGC0001494.1	0.60	RiPP	acinetodin	Acinetobacter gyllenbergii CIP 110306
BGC0000572.1	0.59	RiPP	capistruin	Burkholderia thailandensis E444
BGC0000581.1	0.55	RiPP	microcin J25	Escherichia coli
BGC0000573.1	0.54	RiPP	caulonodin I, caulonodin II	Caulobacter sp. K31
BGC0001889.1	0.54	RiPP	fusilassin	Thermobifida fusca YX
BGC0001496.1	0.54	RiPP	actinokineosin	Actinokineospora spheciospongiae

Similar known gene clusters

Lasso peptide predictions

Lassopeptide(s) for ctg60_13 - Putative Class II

ctg60_13 leader / core peptide / cleaved tail: VDQDPELQLEIVELGDANQATK - GSPQGVATELNEAVTYKP

Lassopeptide(s) for ctg60_14 - Putative Class II

ctg60_14 leader / core peptide / cleaved tail: MNDALELELVDLGDAKEQTK - GYISGVPSELNEAAPYKQQP

Legend:

Red: Putative macrolactam
Purple: Putative cleaved off residues

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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Lasso peptides

Core peptide predictions

ctg60_13 - Class II: Cleavage pHMM score: 8.80; RODEO score: 23; Monoisotopic mass: 1841.9 Da; Molecular weight: 1843.0 Da; Number of bridges: 0
ctg60_14 - Class II: Cleavage pHMM score: 14.00; RODEO score: 23; Monoisotopic mass: 2129.0 Da; Molecular weight: 2130.3 Da; Number of bridges: 0