LOCUS       NC_021505.1             9333 bp    DNA     linear   UNK 01-JAN-1980
DEFINITION  NC_021505.1 Pseudomonas putida NBRC 14164, complete sequence.
ACCESSION   NC_021505
VERSION     NC_021505.1
KEYWORDS    .
SOURCE      
  ORGANISM  
            .
COMMENT     ##antiSMASH-Data-START##
            Version      :: 6.1.1
            Run date     :: 2024-03-14 13:05:49
            NOTE: This is a single cluster extracted from a larger record!
            Orig. start  :: 3459784
            Orig. end    :: 3469117
            ##antiSMASH-Data-END##
FEATURES             Location/Qualifiers
     CDS             1..930
                     /gene_functions="biosynthetic-additional (smcogs)
                     SMCOG1025:diguanylate cyclase (Score: 121.3; E-value:
                     1.1e-36)"
                     /gene_kind="biosynthetic-additional"
                     /locus_tag="ctg1_3053"
                     /transl_table=11
                     /translation="MRLNPLFKQHALTLVGLVLAANAGLLVYLAAGTLKAWAEINWMDV
                     AGEGGTCLILCGWLVMLLRGRPAGRVTRLLSLGLCFIAFSMWMDTLDEFIRLPDDAVWD
                     NWLETAPMPLGMLLLTLGMYHLQQEQHAITAQMRKREQLFREHRLFDKLTPLSGARYLR
                     QHLQQAIAQAAREQQALSLIVVDLDDFNQINQRYGQEEGDLVLQVVAQLLLLNLRQHDI
                     LCRLAGDRFVAALPNTGERQAQAMAEALRQSIAHLAHHTGRHGERLHLTATVASVMALD
                     EDEDHLLKRLNYALAQAKSRQTHQVQRA"
     protocluster    1..9333
                     /aStool="rule-based-clusters"
                     /category="RiPP"
                     /contig_edge="False"
                     /core_location="[3463455:3464289](+)"
                     /cutoff="20000"
                     /detection_rule="(strepbact or Antimicrobial14 or
                     Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or
                     Bacteriocin_IIi or Lactococcin or Antimicrobial17 or
                     Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin
                     or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or
                     TIGR03795 or TIGR03975 or DUF692 or TIGR01193)"
                     /neighbourhood="5000"
                     /product="RiPP-like"
                     /protocluster_number="1"
                     /tool="antismash"
     proto_core      3672..4505
                     /aStool="rule-based-clusters"
                     /tool="antismash"
                     /cutoff="20000"
                     /detection_rule="(strepbact or Antimicrobial14 or
                     Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or
                     Bacteriocin_IIi or Lactococcin or Antimicrobial17 or
                     Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin
                     or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or
                     TIGR03795 or TIGR03975 or DUF692 or TIGR01193)"
                     /neighbourhood="5000"
                     /product="RiPP-like"
                     /protocluster_number="1"
     cand_cluster    1..9333
                     /candidate_cluster_number="1"
                     /contig_edge="False"
                     /detection_rules="(strepbact or Antimicrobial14 or
                     Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or
                     Bacteriocin_IIi or Lactococcin or Antimicrobial17 or
                     Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin
                     or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or
                     TIGR03795 or TIGR03975 or DUF692 or TIGR01193)"
                     /kind="single"
                     /product="RiPP-like"
                     /protoclusters="1"
                     /tool="antismash"
     region          1..9333
                     /candidate_cluster_numbers="1"
                     /contig_edge="False"
                     /product="RiPP-like"
                     /region_number="5"
                     /rules="(strepbact or Antimicrobial14 or Bacteriocin_IId or
                     BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or
                     Lactococcin or Antimicrobial17 or Lactococcin_972 or
                     Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or
                     TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or
                     TIGR03975 or DUF692 or TIGR01193)"
                     /tool="antismash"
     aSDomain        445..918
                     /aSDomain="TIGR00254"
                     /aSTool="tigrfam"
                     /description="GGDEF: diguanylate cyclase (GGDEF) domain"
                     /detection="hmmscan"
                     /domain_id="TIGRFam_ctg1_3053_0061"
                     /evalue="4.30E-29"
                     /identifier="TIGR00254"
                     /label="ctg1_3053"
                     /locus_tag="ctg1_3053"
                     /protein_end="306"
                     /protein_start="148"
                     /score="99.3"
                     /tool="antismash"
                     /translation="LFDKLTPLSGARYLRQHLQQAIAQAAREQQALSLIVVDLDDFNQI
                     NQRYGQEEGDLVLQVVAQLLLLNLRQHDILCRLAGDRFVAALPNTGERQAQAMAEALRQ
                     SIAHLAHHTGRHGERLHLTATVASVMALDEDEDHLLKRLNYALAQAKSRQTHQV"
     PFAM_domain     448..909
                     /aSDomain="GGDEF"
                     /aSTool="clusterhmmer"
                     /database="34.0"
                     /db_xref="PF00990.23"
                     /description="Diguanylate cyclase, GGDEF domain"
                     /detection="hmmscan"
                     /domain_id="clusterhmmer_ctg1_3053_0204"
                     /evalue="3.60E-34"
                     /label="ctg1_3053"
                     /locus_tag="ctg1_3053"
                     /protein_end="303"
                     /protein_start="149"
                     /score="117.9"
                     /tool="antismash"
                     /translation="FDKLTPLSGARYLRQHLQQAIAQAAREQQALSLIVVDLDDFNQIN
                     QRYGQEEGDLVLQVVAQLLLLNLRQHDILCRLAGDRFVAALPNTGERQAQAMAEALRQS
                     IAHLAHHTGRHGERLHLTATVASVMALDEDEDHLLKRLNYALAQAKSRQT"
     CDS             927..1946
                     /locus_tag="ctg1_3054"
                     /transl_table=11
                     /translation="MNGYDGDSRFITAHHLPAALIDLARSRQIDTHHLLRGCGLFYDDV
                     VSGQALVSPQQFLRLIGNAQRLLDADDTSFLYGQRLWPGHHGAASLLLEQADHLLQALE
                     RIEQYRALLSPLLSPVLRLDEHYLHLYWRESCAIDEQRRFLLEASMTAVVALARRQQQE
                     HLPWRFRFRHAEPAYVEQYWVHLGDSLAFDCPSTVMSLPREYLLRAWPGAGSTAQHVAR
                     QACDAQLAAWGWRASFLDLVYEHLLGLIRQPLNLERVAAAFATSPASFKRRLVRHGSNF
                     QEQLDQVRCDQALYLYQVKGYSNDAVAQYLGFSDSTNFRRSFKRWTGRVPSELEALWG"
     PFAM_domain     1014..1550
                     /aSDomain="Arabinose_bd"
                     /aSTool="clusterhmmer"
                     /database="34.0"
                     /db_xref="PF12625.9"
                     /description="Arabinose-binding domain of AraC
                     transcription regulator, N-term"
                     /detection="hmmscan"
                     /domain_id="clusterhmmer_ctg1_3054_0205"
                     /evalue="2.80E-22"
                     /label="ctg1_3054"
                     /locus_tag="ctg1_3054"
                     /protein_end="208"
                     /protein_start="29"
                     /score="79.8"
                     /tool="antismash"
                     /translation="DTHHLLRGCGLFYDDVVSGQALVSPQQFLRLIGNAQRLLDADDTS
                     FLYGQRLWPGHHGAASLLLEQADHLLQALERIEQYRALLSPLLSPVLRLDEHYLHLYWR
                     ESCAIDEQRRFLLEASMTAVVALARRQQQEHLPWRFRFRHAEPAYVEQYWVHLGDSLAF
                     DCPSTVMSLPREYLLR"
     PFAM_domain     1701..1928
                     /aSDomain="HTH_18"
                     /aSTool="clusterhmmer"
                     /database="34.0"
                     /db_xref="PF12833.9"
                     /description="Helix-turn-helix domain"
                     /detection="hmmscan"
                     /domain_id="clusterhmmer_ctg1_3054_0206"
                     /evalue="1.30E-12"
                     /label="ctg1_3054"
                     /locus_tag="ctg1_3054"
                     /protein_end="334"
                     /protein_start="258"
                     /score="47.9"
                     /tool="antismash"
                     /translation="VAAAFATSPASFKRRLVRHGSNFQEQLDQVRCDQALYLYQVKGYS
                     NDAVAQYLGFSDSTNFRRSFKRWTGRVPSEL"
     CDS             complement(1970..2611)
                     /locus_tag="ctg1_3055"
                     /transl_table=11
                     /translation="MKTDDLIALLAAGEGPVDRHALGRRMLLALVAGGLVAVLLTVAIF
                     GVRGDLAQVAHTPLFWAKLALPGSLALLALWLTQRLARPGVKGGLLWGLLGLPLLLVWL
                     GAAISLLGAPVDARADLLLGRTWRTCPLNITLLSVPTFIAVFWALRGLAPTRLRQSGAA
                     GGMLAGATATLAYCLHCPEMAVPFWGLWYVLGLLVPTVVGAALGPRLLRW"
     PFAM_domain     complement(1973..2584)
                     /aSDomain="NrsF"
                     /aSTool="clusterhmmer"
                     /database="34.0"
                     /db_xref="PF06532.13"
                     /description="Negative regulator of sigma F"
                     /detection="hmmscan"
                     /domain_id="clusterhmmer_ctg1_3055_0207"
                     /evalue="1.20E-73"
                     /label="ctg1_3055"
                     /locus_tag="ctg1_3055"
                     /protein_end="213"
                     /protein_start="9"
                     /score="247.3"
                     /tool="antismash"
                     /translation="LAAGEGPVDRHALGRRMLLALVAGGLVAVLLTVAIFGVRGDLAQV
                     AHTPLFWAKLALPGSLALLALWLTQRLARPGVKGGLLWGLLGLPLLLVWLGAAISLLGA
                     PVDARADLLLGRTWRTCPLNITLLSVPTFIAVFWALRGLAPTRLRQSGAAGGMLAGATA
                     TLAYCLHCPEMAVPFWGLWYVLGLLVPTVVGAALGPRLLRW"
     CDS             complement(2598..3137)
                     /gene_functions="regulatory (smcogs) SMCOG1032:RNA
                     polymerase, sigma-24 subunit, ECF subfamily (Score: 113.3;
                     E-value: 1.6e-34)"
                     /gene_kind="regulatory"
                     /locus_tag="ctg1_3056"
                     /transl_table=11
                     /translation="LQALLLQGLAGDAVAYRAFLAALATHVRGFLLRRLGQRPADVEDM
                     LQEVLLAVHNARHTYQAQQPLTAWVQAIARYKLADHYRSYARHGALHEALNDDSDLFAP
                     GEEEAAQATRDLGKLLEQLPARQRLPIVHVKLEGLSVEETARMTGLSSSAVKVGIHRGL
                     KALAKLIGGKGDDEDR"
     aSDomain        complement(2634..3095)
                     /aSDomain="TIGR02937"
                     /aSTool="tigrfam"
                     /description="sigma70-ECF: RNA polymerase sigma factor,
                     sigma-70 family"
                     /detection="hmmscan"
                     /domain_id="TIGRFam_ctg1_3056_0062"
                     /evalue="1.60E-19"
                     /identifier="TIGR02937"
                     /label="ctg1_3056"
                     /locus_tag="ctg1_3056"
                     /protein_end="168"
                     /protein_start="14"
                     /score="68.1"
                     /tool="antismash"
                     /translation="AYRAFLAALATHVRGFLLRRLGQRPADVEDMLQEVLLAVHNARHT
                     YQAQQPLTAWVQAIARYKLADHYRSYARHGALHEALNDDSDLFAPGEEEAAQATRDLGK
                     LLEQLPARQRLPIVHVKLEGLSVEETARMTGLSSSAVKVGIHRGLKALAK"
     PFAM_domain     complement(2640..2795)
                     /aSDomain="Sigma70_r4_2"
                     /aSTool="clusterhmmer"
                     /database="34.0"
                     /db_xref="PF08281.14"
                     /description="Sigma-70, region 4"
                     /detection="hmmscan"
                     /domain_id="clusterhmmer_ctg1_3056_0209"
                     /evalue="1.60E-13"
                     /label="ctg1_3056"
                     /locus_tag="ctg1_3056"
                     /protein_end="166"
                     /protein_start="114"
                     /score="50.2"
                     /tool="antismash"
                     /translation="DLGKLLEQLPARQRLPIVHVKLEGLSVEETARMTGLSSSAVKVGI
                     HRGLKAL"
     PFAM_domain     complement(2877..3062)
                     /aSDomain="Sigma70_r2"
                     /aSTool="clusterhmmer"
                     /database="34.0"
                     /db_xref="PF04542.16"
                     /description="Sigma-70 region 2"
                     /detection="hmmscan"
                     /domain_id="clusterhmmer_ctg1_3056_0208"
                     /evalue="5.60E-10"
                     /label="ctg1_3056"
                     /locus_tag="ctg1_3056"
                     /protein_end="87"
                     /protein_start="25"
                     /score="39.0"
                     /tool="antismash"
                     /translation="HVRGFLLRRLGQRPADVEDMLQEVLLAVHNARHTYQAQQPLTAWV
                     QAIARYKLADHYRSYAR"
     CDS             3368..3655
                     /locus_tag="ctg1_3057"
                     /transl_table=11
                     /translation="MKTLALATAALALASLAGVALAADATNTATTGAAMEKCYGVAMAG
                     KNDCKAGAGTSCAGSAKKDYDGMHWKNVPAGTCTSIKTPNGMGSLTPLKS"
     PFAM_domain     3470..3634
                     /aSDomain="DUF2282"
                     /aSTool="clusterhmmer"
                     /database="34.0"
                     /db_xref="PF10048.11"
                     /description="Predicted integral membrane protein
                     (DUF2282)"
                     /detection="hmmscan"
                     /domain_id="clusterhmmer_ctg1_3057_0210"
                     /evalue="4.70E-25"
                     /label="ctg1_3057"
                     /locus_tag="ctg1_3057"
                     /protein_end="89"
                     /protein_start="34"
                     /score="87.5"
                     /tool="antismash"
                     /translation="MEKCYGVAMAGKNDCKAGAGTSCAGSAKKDYDGMHWKNVPAGTCT
                     SIKTPNGMGS"
     CDS             3672..4505
                     /gene_functions="biosynthetic (rule-based-clusters)
                     RiPP-like: DUF692"
                     /gene_kind="biosynthetic"
                     /locus_tag="ctg1_3058"
                     /sec_met_domain="DUF692 (E-value: 3.4e-96, bitscore: 319.9,
                     seeds: 7, tool: rule-based-clusters)"
                     /transl_table=11
                     /translation="MNGTYSAGAGLGLKAEHYADAWTCRASGLWFEVHPENYMLGGPRM
                     AWLQRIAEHHPLSLHGVALSLAADIAPDEMHLHRLRALIDQLQPALVSEHLAWSSWRGQ
                     YLPDLLPFPRSNEALIRISDNVQRTQDALGRSISLENPSHYLPMEGHDWDEIDFLAELA
                     RRTGCGLLLDVNNVHVSAHNLGFDAAAYLARFPAQAISEIHLAGHSHDAQASLLIDSHD
                     ATIAAPVWALYQQLITRIGPRPTLIERDGNLPAFSELLAERDTAQALLDSAGARP"
     PFAM_domain     3693..4481
                     /aSDomain="DUF692"
                     /aSTool="clusterhmmer"
                     /database="34.0"
                     /db_xref="PF05114.15"
                     /description="Protein of unknown function (DUF692)"
                     /detection="hmmscan"
                     /domain_id="clusterhmmer_ctg1_3058_0211"
                     /evalue="3.20E-95"
                     /label="ctg1_3058"
                     /locus_tag="ctg1_3058"
                     /protein_end="270"
                     /protein_start="7"
                     /score="318.4"
                     /tool="antismash"
                     /translation="GAGLGLKAEHYADAWTCRASGLWFEVHPENYMLGGPRMAWLQRIA
                     EHHPLSLHGVALSLAADIAPDEMHLHRLRALIDQLQPALVSEHLAWSSWRGQYLPDLLP
                     FPRSNEALIRISDNVQRTQDALGRSISLENPSHYLPMEGHDWDEIDFLAELARRTGCGL
                     LLDVNNVHVSAHNLGFDAAAYLARFPAQAISEIHLAGHSHDAQASLLIDSHDATIAAPV
                     WALYQQLITRIGPRPTLIERDGNLPAFSELLAERDTAQALL"
     CDS             4502..5257
                     /locus_tag="ctg1_3059"
                     /transl_table=11
                     /translation="MTLSLGQFQAAFVEALYHRPAPQLAALTGHAAFAVYRNSVLAGCV
                     DALRANFPSVEALTGPAWMQDAASAYAQRTPPDDPRLIHYGAAFADFLEQMQAQHGLPY
                     LADVARLDFAWCEAFSAPREPSLALADLAGMTATDLANSYLAPRRSVRWRWFARHPAFS
                     LWQHSREGQAWPHDQPWVAEGAVFSGTAEGVAQQALEVGGYAFLDACAQGLPLEQASQV
                     ALARQPDLDFTDLLGRLLAAQAFRPLAFA"
     PFAM_domain     4520..4780
                     /aSDomain="DUF2063"
                     /aSTool="clusterhmmer"
                     /database="34.0"
                     /db_xref="PF09836.11"
                     /description="Putative DNA-binding domain"
                     /detection="hmmscan"
                     /domain_id="clusterhmmer_ctg1_3059_0212"
                     /evalue="3.80E-18"
                     /label="ctg1_3059"
                     /locus_tag="ctg1_3059"
                     /protein_end="93"
                     /protein_start="6"
                     /score="65.6"
                     /tool="antismash"
                     /translation="QFQAAFVEALYHRPAPQLAALTGHAAFAVYRNSVLAGCVDALRAN
                     FPSVEALTGPAWMQDAASAYAQRTPPDDPRLIHYGAAFADFL"
     CDS             5268..5732
                     /locus_tag="ctg1_3060"
                     /transl_table=11
                     /translation="MDTLHATRSDSLRQRWNHLADRAQLLLSDTLLCLVARMAIASTFF
                     LSGRTKVEGFLSITPSTYDLFQSEYALPLVSPWLAAHLATYAEHLFPLLLVLGLFTRLS
                     ALALLGMTTVIEIFVYPDAWPTHLTWAALLLLLIARGAGRLSLDRALGLR"
     PFAM_domain     5364..5627
                     /aSDomain="DoxX"
                     /aSTool="clusterhmmer"
                     /database="34.0"
                     /db_xref="PF07681.14"
                     /description="DoxX"
                     /detection="hmmscan"
                     /domain_id="clusterhmmer_ctg1_3060_0213"
                     /evalue="4.20E-18"
                     /label="ctg1_3060"
                     /locus_tag="ctg1_3060"
                     /protein_end="120"
                     /protein_start="32"
                     /score="65.8"
                     /tool="antismash"
                     /translation="CLVARMAIASTFFLSGRTKVEGFLSITPSTYDLFQSEYALPLVSP
                     WLAAHLATYAEHLFPLLLVLGLFTRLSALALLGMTTVIEIFVY"
     CDS             5843..8311
                     /locus_tag="ctg1_3061"
                     /transl_table=11
                     /translation="MAKPLQEYLRKRDFNATPEPAGKRAHPRPAHGLQYCIQKHDASHL
                     HYDFRLELDGTLKSWAIPKGPSLDPKVRRLAVHVEDHPLDYASFEGHIPEGHYGAGDVI
                     VWDRGLWEPEGDPREAYAKGKLRFRLQGEKLSGVWNLFRTHLAGKKEQWMLVKSHDGEA
                     RSEADYSIVEALPDSVLSDRTLVPRRPARAATSTRKRKASAGALPEMLQPQLATLADSP
                     PEGDWRYEVKFDGYRMLARIDGDDVRLFTRNGHDWSAKLPHQVQALKALGLDSAWLDGE
                     MVVTDENGVADFQALQAAFDNEHDDDITYYLFDLPYLGGKDLRELPVQDRRATLAKLLK
                     HNASAILKFSEDFNQPVDALLDSACRLGLEGLIGKRADSPYVGRRSSDWVKLKCTQRQE
                     FVIVGYTAPKGSRQGFGALLLALHDTDSGQLRYAGKVGTGFSAATLTSILTRLKPLHTA
                     KPPLPEPPSGADARGVHWLKPELLAEVAYAQMTRTGIVRHAVFHGLRDDKPATAIALER
                     AMPVKNAAHAEPKGLSNLHLTHPDRVIDKTSGTSKRQVAEYYAQVADWLLPQLEHRPVA
                     LVRAPEGLDGELFFQKHAGQLHLPKLTSYTKAQAGQAAMVLNSAESLLGAVQMNMLELH
                     TWNATDKNFDRPDRFILDLDPDPALPWKAMLEATQLPLTLLDELGLKVFLKTSGGKGMH
                     LVVPLTRRAGWEEVKDFSHALVKHMADLFPDRLSAVSGPKNRVGRIFIDYLRNGKGATT
                     VAAYSLRAREGLPVSVPIWREELPKLKSANQWNIGNLQARLAQVDDPWAELGSTRQSIT
                     LRMRKQLGIA"
     aSDomain        5855..6322
                     /aSDomain="TIGR02777"
                     /aSTool="tigrfam"
                     /description="LigD_PE_dom: DNA ligase D, 3'-phosphoesterase
                     domain"
                     /detection="hmmscan"
                     /domain_id="TIGRFam_ctg1_3061_0066"
                     /evalue="9.80E-73"
                     /identifier="TIGR02777"
                     /label="ctg1_3061"
                     /locus_tag="ctg1_3061"
                     /protein_end="160"
                     /protein_start="4"
                     /score="241.0"
                     /tool="antismash"
                     /translation="LQEYLRKRDFNATPEPAGKRAHPRPAHGLQYCIQKHDASHLHYDF
                     RLELDGTLKSWAIPKGPSLDPKVRRLAVHVEDHPLDYASFEGHIPEGHYGAGDVIVWDR
                     GLWEPEGDPREAYAKGKLRFRLQGEKLSGVWNLFRTHLAGKKEQWMLVKSHD"
     PFAM_domain     5954..6265
                     /aSDomain="LigD_N"
                     /aSTool="clusterhmmer"
                     /database="34.0"
                     /db_xref="PF13298.8"
                     /description="DNA polymerase Ligase (LigD)"
                     /detection="hmmscan"
                     /domain_id="clusterhmmer_ctg1_3061_0214"
                     /evalue="1.50E-39"
                     /label="ctg1_3061"
                     /locus_tag="ctg1_3061"
                     /protein_end="141"
                     /protein_start="37"
                     /score="134.6"
                     /tool="antismash"
                     /translation="QKHDASHLHYDFRLELDGTLKSWAIPKGPSLDPKVRRLAVHVEDH
                     PLDYASFEGHIPEGHYGAGDVIVWDRGLWEPEGDPREAYAKGKLRFRLQGEKLSGVWNL
                     "
     aSDomain        6479..7381
                     /aSDomain="TIGR02779"
                     /aSTool="tigrfam"
                     /description="NHEJ_ligase_lig: DNA ligase D, ligase domain"
                     /detection="hmmscan"
                     /domain_id="TIGRFam_ctg1_3061_0064"
                     /evalue="1.30E-110"
                     /identifier="TIGR02779"
                     /label="ctg1_3061"
                     /locus_tag="ctg1_3061"
                     /protein_end="513"
                     /protein_start="212"
                     /score="367.3"
                     /tool="antismash"
                     /translation="PQLATLADSPPEGDWRYEVKFDGYRMLARIDGDDVRLFTRNGHDW
                     SAKLPHQVQALKALGLDSAWLDGEMVVTDENGVADFQALQAAFDNEHDDDITYYLFDLP
                     YLGGKDLRELPVQDRRATLAKLLKHNASAILKFSEDFNQPVDALLDSACRLGLEGLIGK
                     RADSPYVGRRSSDWVKLKCTQRQEFVIVGYTAPKGSRQGFGALLLALHDTDSGQLRYAG
                     KVGTGFSAATLTSILTRLKPLHTAKPPLPEPPSGADARGVHWLKPELLAEVAYAQMTRT
                     GIVRHAVFHGLRDDKPATAI"
     aSDomain        6506..8254
                     /aSDomain="TIGR02776"
                     /aSTool="tigrfam"
                     /description="NHEJ_ligase_prk: DNA ligase D"
                     /detection="hmmscan"
                     /domain_id="TIGRFam_ctg1_3061_0063"
                     /evalue="1.20E-225"
                     /identifier="TIGR02776"
                     /label="ctg1_3061"
                     /locus_tag="ctg1_3061"
                     /protein_end="804"
                     /protein_start="221"
                     /score="748.8"
                     /tool="antismash"
                     /translation="PPEGDWRYEVKFDGYRMLARIDGDDVRLFTRNGHDWSAKLPHQVQ
                     ALKALGLDSAWLDGEMVVTDENGVADFQALQAAFDNEHDDDITYYLFDLPYLGGKDLRE
                     LPVQDRRATLAKLLKHNASAILKFSEDFNQPVDALLDSACRLGLEGLIGKRADSPYVGR
                     RSSDWVKLKCTQRQEFVIVGYTAPKGSRQGFGALLLALHDTDSGQLRYAGKVGTGFSAA
                     TLTSILTRLKPLHTAKPPLPEPPSGADARGVHWLKPELLAEVAYAQMTRTGIVRHAVFH
                     GLRDDKPATAIALERAMPVKNAAHAEPKGLSNLHLTHPDRVIDKTSGTSKRQVAEYYAQ
                     VADWLLPQLEHRPVALVRAPEGLDGELFFQKHAGQLHLPKLTSYTKAQAGQAAMVLNSA
                     ESLLGAVQMNMLELHTWNATDKNFDRPDRFILDLDPDPALPWKAMLEATQLPLTLLDEL
                     GLKVFLKTSGGKGMHLVVPLTRRAGWEEVKDFSHALVKHMADLFPDRLSAVSGPKNRVG
                     RIFIDYLRNGKGATTVAAYSLRAREGLPVSVPIWREELPKLKSANQWNIGNLQARLAQV
                     DDPWAEL"
     PFAM_domain     6509..7021
                     /aSDomain="DNA_ligase_A_M"
                     /aSTool="clusterhmmer"
                     /database="34.0"
                     /db_xref="PF01068.23"
                     /description="ATP dependent DNA ligase domain"
                     /detection="hmmscan"
                     /domain_id="clusterhmmer_ctg1_3061_0215"
                     /evalue="7.30E-28"
                     /label="ctg1_3061"
                     /locus_tag="ctg1_3061"
                     /protein_end="393"
                     /protein_start="222"
                     /score="97.7"
                     /tool="antismash"
                     /translation="PEGDWRYEVKFDGYRMLARIDGDDVRLFTRNGHDWSAKLPHQVQA
                     LKALGLDSAWLDGEMVVTDENGVADFQALQAAFDNEHDDDITYYLFDLPYLGGKDLREL
                     PVQDRRATLAKLLKHNASAILKFSEDFNQPVDALLDSACRLGLEGLIGKRADSPYVGRR
                     SSDWVKLK"
     PFAM_domain     7076..7366
                     /aSDomain="DNA_ligase_A_C"
                     /aSTool="clusterhmmer"
                     /database="34.0"
                     /db_xref="PF04679.17"
                     /description="ATP dependent DNA ligase C terminal region"
                     /detection="hmmscan"
                     /domain_id="clusterhmmer_ctg1_3061_0216"
                     /evalue="2.40E-24"
                     /label="ctg1_3061"
                     /locus_tag="ctg1_3061"
                     /protein_end="508"
                     /protein_start="411"
                     /score="85.9"
                     /tool="antismash"
                     /translation="RQGFGALLLALHDTDSGQLRYAGKVGTGFSAATLTSILTRLKPLH
                     TAKPPLPEPPSGADARGVHWLKPELLAEVAYAQMTRTGIVRHAVFHGLRDDK"
     aSDomain        7448..8170
                     /aSDomain="TIGR02778"
                     /aSTool="tigrfam"
                     /description="ligD_pol: DNA ligase D, polymerase domain"
                     /detection="hmmscan"
                     /domain_id="TIGRFam_ctg1_3061_0065"
                     /evalue="1.80E-86"
                     /identifier="TIGR02778"
                     /label="ctg1_3061"
                     /locus_tag="ctg1_3061"
                     /protein_end="776"
                     /protein_start="535"
                     /score="287.8"
                     /tool="antismash"
                     /translation="HLTHPDRVIDKTSGTSKRQVAEYYAQVADWLLPQLEHRPVALVRA
                     PEGLDGELFFQKHAGQLHLPKLTSYTKAQAGQAAMVLNSAESLLGAVQMNMLELHTWNA
                     TDKNFDRPDRFILDLDPDPALPWKAMLEATQLPLTLLDELGLKVFLKTSGGKGMHLVVP
                     LTRRAGWEEVKDFSHALVKHMADLFPDRLSAVSGPKNRVGRIFIDYLRNGKGATTVAAY
                     SLRAREGLPVSVPIWREEL"
     CDS             8311..9333
                     /locus_tag="ctg1_3062"
                     /transl_table=11
                     /translation="MDFAHLARLLHRFGTRLRAIDLDPLLPELLQALRAEQLDLLPLPG
                     HGRTLERWRALARVAGCDLGLAKLYEGHTDALAILAECGAAQHAHDGIWGMWAAEPPDA
                     RAHIVARHGERVQLQGRKAWCSGALQIDRALLTAWENDQPQLVAIELSHPSQRIQAEQW
                     QAVGMASTASVTIEFDNSPGLAIGTPGQYLSRPGFWQGGAGIAACWYGAAEALAGYLRE
                     HCNKPRPDPHADAHLGAVDAALYGARAALRECAAWIDQHPQDDASFEVRRTRAQIEQAV
                     EQVIQHVGRALGATPFCRSSHFARLSADLPVYLRQSHAERDLAELGQQVTSTPTGAWQL
                     "
ORIGIN
        1 atgcgcctca accccctgtt caaacagcac gcccttacgc tggtcggcct ggtactggcc
       61 gccaacgccg gcctgctcgt ctacctcgcc gccggcacgc ttaaagcctg ggccgagatc
      121 aactggatgg acgtcgccgg cgagggcggc acttgcctga tcctctgcgg ctggctggtg
      181 atgctgctac gcgggcgccc tgctggccgg gtcacccgcc tgctttcgct gggcctgtgc
      241 ttcatcgcct tctcgatgtg gatggacacc ctcgacgaat tcatccgcct gcccgacgac
      301 gcggtctggg acaactggct ggagactgcg cccatgccgc tgggcatgct gctgctgacc
      361 ctgggcatgt accacctgca gcaagaacag cacgccatca ccgcacagat gcgcaagcgt
      421 gagcaactgt tccgcgagca ccgcctgttc gacaagctta ccccgctgtc cggtgcccgg
      481 tacctgcgcc agcacctgca gcaggccatt gcccaagccg cccgcgaaca gcaagccttg
      541 tcgctgatcg tcgtcgacct ggacgatttc aaccagatca accagcgcta tggccaggaa
      601 gaaggcgatc tggtgctgca agtggtcgcc caactgctgc tgctcaacct gcgccagcac
      661 gacatactct gccgcctggc cggcgaccgc ttcgtcgcgg cgctgcccaa taccggggaa
      721 cgccaggccc aggccatggc cgaggcgctg cgccagagca tcgcccacct cgcccatcac
      781 accggccggc atggcgagcg cctgcacctg accgccacgg tggccagcgt gatggcgctg
      841 gacgaagacg aagaccacct gctgaaacgc ctcaactacg ccctggccca ggccaagagc
      901 cgccagacgc atcaggtaca acgggcatga acggctatga cggcgacagc cgcttcatca
      961 ccgcccacca cctgcccgct gcgctgatcg acctggcgcg ttcgcggcag atcgacaccc
     1021 atcacttgct acgcggctgc gggctgtttt acgacgacgt ggtcagcggc caagcgctgg
     1081 tcagcccaca gcagttcctt cgcctgatcg gcaatgcgca gcggctgctc gatgccgacg
     1141 acaccagctt tctctacggc cagcgcctgt ggcccgggca ccacggtgcc gccagcttgt
     1201 tgctggagca ggccgaccac ctgctgcagg ccctggagcg catcgagcag taccgcgccc
     1261 tgctgtcccc gttgctcagc ccggtgctgc gcctcgatga gcactacctg cacctgtact
     1321 ggcgggaaag ctgcgccatc gacgagcagc gccgcttcct gctggaggcc agcatgacag
     1381 cggtggtggc cctcgcgcgg cgccagcagc aagagcacct gccctggcgt ttccggttcc
     1441 gccatgccga accggcctac gtcgaacagt actgggtaca cctgggcgat tctctggcct
     1501 tcgactgccc atccacggtg atgagcctgc cccgggaata cctgctgcgt gcctggccgg
     1561 gtgccgggtc gaccgcccag cacgtggcac gccaggcctg cgatgcacag ctggcggcct
     1621 ggggctggcg ggcgagtttt ctcgacctgg tctacgagca cctgctcggg ctgattcgcc
     1681 agccgctgaa cctggaacgg gtagccgccg ccttcgccac cagccccgct tcgttcaagc
     1741 gccgcctggt ccgtcatggt tccaacttcc aggagcaact ggaccaggtg cgctgcgacc
     1801 aggcgctgta cctctaccag gtcaagggct acagcaacga cgcggttgcg cagtacctgg
     1861 gcttcagcga cagcaccaac ttccgccgtt cgttcaagcg ctggaccggg cgtgtgccaa
     1921 gtgaactgga agccttgtgg ggctgatgcc caggatcgtc gtgccgggat taccaacgta
     1981 ataaacgcgg ccctagcgcc gcccccacaa cggtcggcac cagcaacccc agtacgtacc
     2041 acagccccca gaacggcacc gccatttccg ggcagtgcag gcaataagcc agggtggccg
     2101 tggcccccgc aagcatgcca cccgccgccc cggactgccg caggcgggtg ggtgccaggc
     2161 cgcgcaatgc ccagaacacc gcgatgaagg tgggaaccga gagcaaggtg atgttcagcg
     2221 ggcaggtgcg ccaggtgcgc cccaacagca ggtccgcccg ggcgtccacc ggcgccccca
     2281 gcaggctgat cgccgcgccc agccagacca gcagcagcgg tagccccaaa aggccccaca
     2341 gcagcccccc cttcaccccc ggcctggcca gccgctgggt cagccacagc gctagcaacg
     2401 ccaggctgcc gggcagggcc agcttggccc agaacagcgg ggtgtgcgcc acttgcgcca
     2461 ggtcgccacg cacgccgaag atggccaccg tcagcaatac cgcgaccaac ccgccagcca
     2521 ccagcgccaa caacatgcgc cggcccagcg cgtgacggtc caccggccct tccccggccg
     2581 ccaatagggc aatcaagtca tcggtcttca tcgtcgccct tgcctccaat cagcttggcc
     2641 agtgccttca ggccccggtg gatgcccact ttcaccgccg aactggaaag accggtcatg
     2701 cgcgcggtct cttccaccga caacccctcc agtttgacat ggacgatggg cagccgttgg
     2761 cgcgccggca actgctccag gagcttgccc aggtcgcgtg tcgcctgggc cgcttcttcc
     2821 tcgccgggcg cgaacaggtc gctgtcatcg ttcagcgcct cgtgcaacgc gccgtggcga
     2881 gcgtaactgc gatagtgatc cgccagcttg tagcgggcaa tggcctgtac ccaggcggtc
     2941 aacggttgct gcgcctggta ggtatggcgg gcgttgtgca ccgccaacaa cacctcttgc
     3001 agcatgtctt cgacatccgc ggggcgttgc cccaggcgcc gcagcaaaaa gcctcgcaca
     3061 tgcgtcgcca gcgccgccag aaacgcccga taggcgactg catcgcccgc caggccttgg
     3121 agcagcagtg cctgcaactg ggcctcgcgc gcgcttagcg cctgctgaga agtagttcgt
     3181 agcatcggcc acccgggtta cacccaacgt gaaagttttc cattcaacgc gtgccgcctt
     3241 catacgttag gcgactggca caccgccgga aaaatttttc aagctgctgt aacccgttca
     3301 acccacgctg cgaactactc cgtgagccgc cggtaaccac cacggcccca cttcccggag
     3361 acgcatcatg aaaactctcg ccctcgccac tgccgcactt gccctggctt cgctggccgg
     3421 tgttgccctg gccgctgacg caaccaacac agccaccacc ggcgccgcga tggaaaaatg
     3481 ctacggcgtc gccatggctg gcaagaacga ctgcaaggcc ggcgccggca ccagctgcgc
     3541 cggtagcgcc aagaaggact acgacggcat gcactggaag aacgtgcccg ccggtacctg
     3601 cacgtccatc aagacgccca acggcatggg ctcgctgacc ccgctcaagt cctgagcgca
     3661 ggccgccgat catgaacggg acttactcag caggcgccgg ccttgggctt aaggctgagc
     3721 actatgccga cgcctggacg tgccgggcca gcgggctgtg gttcgaagtg cacccggaaa
     3781 actacatgct cggcggccca cgcatggcct ggctacaacg cattgccgaa caccatccgc
     3841 tgtcgctgca cggtgtcgcg ctgtcgttgg cggcggacat cgcgccagac gaaatgcacc
     3901 tgcaccgcct gcgggcgctg atcgaccagc tgcagccggc gctggtatcg gagcacctgg
     3961 catggtcgag ctggcgcggg caatacctgc ccgacctgct gccgtttccc cgcagcaacg
     4021 aggccctgat ccgcatcagc gacaacgtgc agcgcaccca ggatgcgctg gggcgcagca
     4081 tttcgctgga aaaccccagc cactacctgc ccatggaagg gcatgactgg gacgaaatcg
     4141 actttttagc cgaactggcg cggcgcacgg ggtgcggctt gttgctggac gtcaacaacg
     4201 tgcacgtcag tgcccacaac ctcgggttcg acgcagcggc gtacctggcg cgcttcccgg
     4261 cccaggccat cagcgaaatc cacctggccg gccacagtca cgacgcccag gccagcctgc
     4321 tgatcgactc ccacgacgcc accatcgccg cgccggtctg ggccttgtac cagcagttga
     4381 tcacccgcat cggcccgcgc ccgaccctca tcgagcgtga cggcaacctg cccgcgttca
     4441 gcgagttgct ggccgaacgc gacaccgccc aggcactgct cgatagcgca ggagcacgac
     4501 catgacgctt tcccttggcc agtttcaggc cgccttcgtc gaagcgctgt atcaccgccc
     4561 tgccccgcag ctggccgcgc tgaccgggca cgctgctttt gcggtgtacc gcaacagcgt
     4621 gctggcgggc tgcgtcgatg ccctgcgggc aaacttcccc agtgtcgaag cgctgacagg
     4681 cccggcctgg atgcaggacg ccgcgagcgc ctatgcgcaa cgaacgcccc ccgacgaccc
     4741 gcggctgatc cactatggcg cggccttcgc cgactttctc gagcagatgc aggcccagca
     4801 cggcctgcca tacctggccg acgtcgcacg cctggatttc gcctggtgcg aggcgttcag
     4861 cgccccccgc gaaccctccc tcgcgcttgc cgacctggcc ggcatgacgg ccaccgacct
     4921 ggcgaacagt tacctggccc cccgccgcag tgtgcgctgg cgctggttcg cacggcaccc
     4981 ggcgttcagc ctgtggcagc acagccgcga aggccaggcg tggccgcatg accagccctg
     5041 ggtcgccgaa ggtgctgtgt tcagtggcac cgccgaaggt gtcgcccagc aagcgctaga
     5101 ggtcggcggc tatgcctttc tcgatgcctg cgctcaaggt ctgccgttgg agcaggcctc
     5161 acaggttgca ctcgcacgcc aacccgacct ggactttacc gacctgctcg gcaggctgct
     5221 ggcagcccag gcattccgtc cacttgcatt cgcctgaagg aaacgccatg gacaccctcc
     5281 acgccacccg ctccgacagc ctgcgccaac gctggaacca cctcgccgat cgtgcacagc
     5341 tactgctcag cgacaccctg ctgtgcctgg tggcgcgcat ggccatcgcc tcgaccttct
     5401 tcctgtccgg gcgcaccaag gtcgaagggt ttctcagcat cacacccagt acctatgacc
     5461 tgttccagag cgaatatgcc ctgccgctgg tttcgccctg gcttgcggcc cacctggcca
     5521 cctatgccga acacctgttc cccctgttgc tggtgcttgg cctgtttacc cggctgtcgg
     5581 cgctggccct gctgggcatg accacggtga tcgaaatttt cgtctacccg gatgcctggc
     5641 cgacccatct gacgtgggcg gccttgttgc tactgttgat cgcgcgaggc gccggtaggt
     5701 tgtcgctgga tcgggccctg gggctgcgtt gagcctctgg cagtgggccg gttcgtcggt
     5761 ccgcgacccc acgctttttt tgaactccat gcgcaggcgc cctctcccaa tgaagagacc
     5821 gcgaactgtc ccggagcccg ccatggccaa gcccctgcag gagtacctgc gcaagcgtga
     5881 cttcaacgcc acacccgagc cggccggcaa gcgtgcccac ccacggccgg ctcacgggtt
     5941 gcagtactgc atccagaagc acgacgccag ccacctgcac tatgactttc gcctggagct
     6001 ggatggcacc ctgaaaagct gggcgattcc caagggccct tccctcgacc ccaaggtccg
     6061 ccgcctggcc gtgcatgtag aagaccatcc gctggactac gccagcttcg aagggcacat
     6121 ccctgaaggc cactacggcg ccggcgacgt gatcgtgtgg gaccgggggc tctgggagcc
     6181 cgaaggcgac ccgcgcgagg cctatgccaa gggcaagctg cgctttcgcc tgcaaggtga
     6241 aaagctgtcg ggggtctgga acctgtttcg tacccacctg gctggcaaga aagagcagtg
     6301 gatgctggtc aagtcccacg atggcgaggc ccgcagcgaa gcggactaca gcatcgtcga
     6361 agccctgccg gacagcgtat tgagcgaccg tacactggtc ccccgccgcc cagccagggc
     6421 ggcgacctcc acgcgcaagc gcaaggccag cgctggcgcc ctgccggaga tgctccagcc
     6481 gcagctggca accctggccg attccccccc cgagggtgac tggcgatacg aggtcaagtt
     6541 cgatggttac cgcatgctgg cccgcatcga cggggacgat gtgcgcctgt ttacccgcaa
     6601 tggccacgac tggagcgcaa agctgcccca tcaggtgcag gcgctgaaag cgttggggct
     6661 cgactcggca tggctggacg gtgagatggt ggtcactgac gagaacggcg tggccgactt
     6721 ccaggccttg caggccgcgt tcgacaacga gcacgacgat gacattacct actacctgtt
     6781 cgacctgccc tacctcggcg gcaaggacct gcgtgaattg cctgtgcaag accgccgggc
     6841 gaccttggcc aaactgctga agcacaacgc atcggccatc ctgaagtttt ccgaagactt
     6901 caaccagccg gtcgacgcgc tgctcgacag cgcctgccgg ttaggcctgg aaggcctgat
     6961 cggcaagcgc gccgacagcc cctacgttgg ccggcgcagc agcgactggg tcaagctcaa
     7021 gtgcacgcaa cgccaggagt tcgtgatcgt cggctacacc gcgcccaagg gcagccgcca
     7081 aggctttggg gccctgctgc tggcgctgca cgacaccgac agcggccagt tgcgctacgc
     7141 cggcaaggtg ggcaccggct tcagtgctgc cacgctgacg agcatcctca cccgcctgaa
     7201 acccctgcac accgccaagc cacccttgcc tgagcccccc agcggtgccg atgcgcgggg
     7261 cgtgcactgg ctcaagccag aactgctggc cgaggtcgcc tacgcccaga tgacccgcac
     7321 agggatcgtg cgccatgcgg tttttcacgg gttgcgcgac gacaagcccg ccactgccat
     7381 tgccctggaa cgtgcaatgc cggtaaagaa cgcagcacat gcagagccca agggtttgag
     7441 caacctgcac ctgacccacc ccgaccgcgt gatcgacaag accagtggca ccagcaaacg
     7501 acaggtggcg gagtactacg cccaagtcgc cgactggctg ctgccacagc tcgaacaccg
     7561 ccccgtggcg ctggtgcgcg caccggaggg cctggacggc gagctgttct ttcagaagca
     7621 tgcggggcag ttgcacctgc ccaagctgac cagctacacc aaggcccagg ccggccaggc
     7681 ggcaatggtg ctcaacagcg ccgagagcct attgggcgca gtacagatga acatgcttga
     7741 actgcacacc tggaacgcca ccgacaaaaa tttcgacagg cctgaccgct tcatcctcga
     7801 cctcgacccc gacccggcat tgccatggaa ggccatgctc gaggccaccc agctgcccct
     7861 caccctgctc gatgagctgg gcctgaaggt gtttctcaag accagcggtg gcaaaggcat
     7921 gcacctggtc gtgccgctca cccgtcgggc cggctgggag gaagtgaagg acttcagcca
     7981 tgccctggtc aaacacatgg cagacttgtt cccggaccgg ctcagcgcgg tctccgggcc
     8041 caagaaccgg gtcgggcgca tcttcatcga ctacctgcgc aacggcaagg gcgctaccac
     8101 cgtggccgcc tactcgctgc gcgcccgcga aggcctgcca gtgtcggtgc cgatctggcg
     8161 cgaggagctg cccaaactca agagtgccaa ccaatggaat atcggcaact tgcaggcgcg
     8221 gcttgcgcag gtggacgacc cttgggccga gctgggctcg acccggcaat cgatcaccct
     8281 gcgcatgcgc aagcaactgg ggatcgcatg atggacttcg ctcacctcgc ccgcctgctg
     8341 caccgcttcg gtacccgttt gcgggccatc gatctcgacc ccttgctgcc tgaactgttg
     8401 caggcacttc gagccgaaca gctagacctg ctacccctgc ccggccacgg gcgcaccctc
     8461 gagcgctggc gggccttggc gcgggttgcc ggttgcgatc tcggcttggc caagctgtat
     8521 gaaggccaca ccgatgccct ggcaatcctc gccgagtgcg gcgccgccca gcatgctcac
     8581 gacggtatct ggggcatgtg ggccgcggag ccgccggatg ccagggccca catcgtcgcg
     8641 cgccatggcg aacgggttca gctgcaaggc cgaaaagcat ggtgctcggg cgcgctgcag
     8701 atcgatcgag cgctgctgac cgcctgggag aatgaccagc cacagctggt ggccattgaa
     8761 ctgtcacacc ccagccagcg catccaggcc gagcaatggc aggccgtagg catggccagc
     8821 accgccagtg tcaccatcga gttcgacaac tcaccggggc tggccatcgg cacacccggc
     8881 cagtacctgt cccgcccagg cttctggcag ggcggcgcag gtatcgctgc ctgctggtac
     8941 ggcgcggccg aggcattggc aggttacctg cgcgagcact gcaacaaacc tcggcccgac
     9001 ccccatgccg atgcccacct gggggcggtc gatgcggcgt tgtacggtgc ccgcgccgcc
     9061 cttcgcgagt gcgccgcgtg gatcgaccag cacccccagg acgacgccag tttcgaggta
     9121 cgccgcaccc gcgcccagat cgagcaggcg gtcgaacagg tcattcagca tgttggccga
     9181 gccctggggg ctaccccctt ctgccgcagc agccatttcg cccggcttag cgccgacctg
     9241 ccggtgtacc tgcgccaaag ccacgctgaa cgcgacttgg ccgaactggg tcagcaagtg
     9301 accagcacac cgacaggagc atggcagcta tga
//
