GCF_007830415.1_ASM783041v1_genomic - 2 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_VLKM01000005 (original name was: NZ_VLKM01000005.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	terpene	60,272	81,411

NZ_VLKM01000007 (original name was: NZ_VLKM01000007.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	terpene	132,270	145,890	carotenoid	Terpene	28%

Region	Type	From	To	Most similar known cluster	Similarity
Region 5.1	terpene	60,272	81,411
Region 7.1	terpene	132,270	145,890	carotenoid	Terpene	28%

No secondary metabolite regions were found in these records:: NZ_VLKM01000001 (original name was: NZ_VLKM01000001.1); NZ_VLKM01000002 (original name was: NZ_VLKM01000002.1); NZ_VLKM01000003 (original name was: NZ_VLKM01000003.1); NZ_VLKM01000004 (original name was: NZ_VLKM01000004.1); NZ_VLKM01000006 (original name was: NZ_VLKM01000006.1); NZ_VLKM01000008 (original name was: NZ_VLKM01000008.1); NZ_VLKM01000009 (original name was: NZ_VLKM01000009.1); NZ_VLKM01000010 (original name was: NZ_VLKM01000010.1); NZ_VLKM01000011 (original name was: NZ_VLKM01000011.1); NZ_VLKM01000012 (original name was: NZ_VLKM01000012.1); NZ_VLKM01000013 (original name was: NZ_VLKM01000013.1); NZ_VLKM01000014 (original name was: NZ_VLKM01000014.1); NZ_VLKM01000015 (original name was: NZ_VLKM01000015.1); NZ_VLKM01000016 (original name was: NZ_VLKM01000016.1); NZ_VLKM01000017 (original name was: NZ_VLKM01000017.1); NZ_VLKM01000018 (original name was: NZ_VLKM01000018.1); NZ_VLKM01000019 (original name was: NZ_VLKM01000019.1); NZ_VLKM01000020 (original name was: NZ_VLKM01000020.1); NZ_VLKM01000021 (original name was: NZ_VLKM01000021.1); NZ_VLKM01000022 (original name was: NZ_VLKM01000022.1); NZ_VLKM01000023 (original name was: NZ_VLKM01000023.1); NZ_VLKM01000024 (original name was: NZ_VLKM01000024.1); NZ_VLKM01000025 (original name was: NZ_VLKM01000025.1)

Compact view

c00005_NZ_VLKM.. - Region 1 - terpene

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Location: 60,272 - 81,411 nt. (total: 21,140 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000851.1	0.19	Other	albonoursin	Streptomyces noursei ATCC 11455
BGC0000633.1	0.17	Terpene	carotenoid	Streptomyces avermitilis
BGC0001456.1	0.17	Terpene	isorenieratene	Streptomyces argillaceus
BGC0000664.1	0.17	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000840.1	0.15	Other	xanthomonadin I	Xanthomonas oryzae pv. oryzae
BGC0000913.1	0.14	Other	MK-8	Enterobacter cloacae
BGC0000243.1	0.14	Polyketide	macrotetrolide	Streptomyces griseus subsp. griseus
BGC0001262.1	0.14	Polyketide	AK-toxin I	Alternaria alternata
BGC0000649.1	0.13	Terpene	carotenoid	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000847.1	0.09	Other (Non-NRP beta-lactam)	thienamycin	Streptomyces cattleya

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000851.1	0.51	Other	albonoursin	Streptomyces noursei ATCC 11455
BGC0000633.1	0.48	Terpene	carotenoid	Streptomyces avermitilis
BGC0001456.1	0.48	Terpene	isorenieratene	Streptomyces argillaceus
BGC0000664.1	0.48	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000840.1	0.45	Other	xanthomonadin I	Xanthomonas oryzae pv. oryzae
BGC0000913.1	0.44	Other	MK-8	Enterobacter cloacae
BGC0000243.1	0.43	Polyketide	macrotetrolide	Streptomyces griseus subsp. griseus
BGC0001262.1	0.43	Polyketide	AK-toxin I	Alternaria alternata
BGC0000649.1	0.42	Terpene	carotenoid	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000847.1	0.34	Other (Non-NRP beta-lactam)	thienamycin	Streptomyces cattleya

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00007_NZ_VLKM.. - Region 1 - terpene

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Location: 132,270 - 145,890 nt. (total: 13,621 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000648.1	0.28	Terpene	carotenoid	Myxococcus xanthus
BGC0000650.1	0.27	Terpene	carotenoid	Algoriphagus sp. KK10202C
BGC0000630.1	0.20	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000640.1	0.20	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000637.1	0.18	Terpene	carotenoid	Corynebacterium glutamicum
BGC0000656.1	0.18	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000664.1	0.16	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000641.1	0.16	Terpene	carotenoid	Enterobacteriaceae bacterium DC416
BGC0000638.1	0.16	Terpene	carotenoid	Pantoea ananatis
BGC0001210.1	0.16	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000648.1	0.62	Terpene	carotenoid	Myxococcus xanthus
BGC0000650.1	0.61	Terpene	carotenoid	Algoriphagus sp. KK10202C
BGC0000630.1	0.53	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000640.1	0.53	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000637.1	0.50	Terpene	carotenoid	Corynebacterium glutamicum
BGC0000656.1	0.50	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000664.1	0.47	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000641.1	0.47	Terpene	carotenoid	Enterobacteriaceae bacterium DC416
BGC0000638.1	0.46	Terpene	carotenoid	Pantoea ananatis
BGC0001210.1	0.46	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442

Similar known gene clusters

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names