Select genomic region:
Overview
1.1
3.1

### Identified secondary metabolite regions using strictness 'relaxed'

NZ_KB905692.1

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 1.1 | betalactone | 207,388 | 233,650 |

NZ_KB905694.1

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 3.1 | arylpolyene | 317,007 | 364,719 | flexirubin | Other | 44%

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 1.1 | betalactone | 207,388 | 233,650 |
Region 3.1 | arylpolyene | 317,007 | 364,719 | flexirubin | Other | 44%

No secondary metabolite regions were found in these records:
  NZ_KB905693.1
  NZ_KB905695.1
  NZ_KB905696.1
  NZ_KB905697.1
  NZ_KB905698.1
  NZ_KB905699.1
  NZ_KB905700.1
  NZ_KB905701.1
  NZ_KB905702.1
  NZ_KB905703.1
  NZ_KB905704.1
  NZ_KB905705.1
  NZ_KB905706.1
  NZ_KB905707.1
  NZ_KB905708.1
  NZ_KB905709.1
  NZ_KB905710.1
  NZ_KB905711.1
  NZ_KB905712.1
  NZ_KB905713.1
  NZ_KB905714.1
  NZ_KB905715.1
  NZ_KB905716.1
  NZ_KB905717.1
  NZ_KB905718.1
  NZ_KB905719.1
  NZ_KB905720.1
  NZ_KB905721.1
  NZ_KB905722.1
  NZ_KB905723.1
  NZ_KB905724.1
  NZ_KB905725.1
  NZ_KB905726.1
  NZ_KB905727.1
  NZ_KB905728.1

Compact view
NZ_KB905692.1 - Region 1 - betalactone
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 207,388 - 233,650 nt. (total: 26,263 nt) Show pHMM detection rules used
betalactone: (HMGL-like and AMP-binding)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | betalactone | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000889.1 |  | 0.15 | Other | bagremycin A, bagremycin B | Streptomyces sp. WK-5344
BGC0000466.1 |  | 0.14 | NRP | yatakemycin | Streptomyces sp. TP-A2060
BGC0000442.1 |  | 0.14 | NRP | terrequinone A | Aspergillus nidulans FGSC A4
BGC0002029.1 |  | 0.14 | Other | bagremycin A, bagremycin B, bagremycin C, bagremycin E, bagremycin F, bagremycin G, ferroverdin A, ferroverdin B, ferroverdin C | Streptomyces lunaelactis
BGC0001592.1 |  | 0.14 | Other | ferroverdin | Streptomyces lunaelactis
BGC0001607.1 |  | 0.14 | Other | gilvusmycin | Streptomyces sp. NRRL B-1347
BGC0001540.1 |  | 0.14 | Other | CC-1065 | Streptomyces zelensis
BGC0001140.1 |  | 0.13 | Terpene | platensimycin, platencin | Streptomyces platensis
BGC0001068.1 |  | 0.13 | Terpene, Polyketide | pyripyropene A | unidentified unclassified sequences.
BGC0001156.1 |  | 0.13 | Terpene | platencin | Streptomyces platensis

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000889.1 |  | 0.45 | Other | bagremycin A, bagremycin B | Streptomyces sp. WK-5344
BGC0000466.1 |  | 0.43 | NRP | yatakemycin | Streptomyces sp. TP-A2060
BGC0000442.1 |  | 0.43 | NRP | terrequinone A | Aspergillus nidulans FGSC A4
BGC0002029.1 |  | 0.43 | Other | bagremycin A, bagremycin B, bagremycin C, bagremycin E, bagremycin F, bagremycin G, ferroverdin A, ferroverdin B, ferroverdin C | Streptomyces lunaelactis
BGC0001592.1 |  | 0.43 | Other | ferroverdin | Streptomyces lunaelactis
BGC0001607.1 |  | 0.43 | Other | gilvusmycin | Streptomyces sp. NRRL B-1347
BGC0001540.1 |  | 0.43 | Other | CC-1065 | Streptomyces zelensis
BGC0001140.1 |  | 0.42 | Terpene | platensimycin, platencin | Streptomyces platensis
BGC0001068.1 |  | 0.42 | Terpene, Polyketide | pyripyropene A | unidentified unclassified sequences.
BGC0001156.1 |  | 0.41 | Terpene | platencin | Streptomyces platensis

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
NZ_KB905694.1 - Region 1 - arylpolyene
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 317,007 - 364,719 nt. (total: 47,713 nt) Show pHMM detection rules used
arylpolyene: (APE_KS1 or APE_KS2)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | arylpolyene | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000839.1 |  | 0.31 | Other | flexirubin | Chitinophaga pinensis DSM 2588
BGC0001521.1 |  | 0.22 | NRP | auriculamide | Herpetosiphon aurantiacus DSM 785
BGC0001897.1 |  | 0.21 | Polyketide | cepacin A | Burkholderia ambifaria IOP40-10
BGC0000219.1 |  | 0.21 | Polyketide, Saccharide | elloramycin | Streptomyces olivaceus
BGC0000237.1 |  | 0.21 | Polyketide | lactonamycin Z | Streptomyces sanglieri
BGC0000272.1 |  | 0.21 | Polyketide | spore pigment | Streptomyces collinus
BGC0000248.1 |  | 0.21 | Polyketide | naphtocyclinone | Streptomyces arenae
BGC0001366.1 |  | 0.20 | Polyketide | BE-24566B, zunyimycin A | Streptomyces sp. FJS31-2
BGC0000261.1 |  | 0.20 | Polyketide | R1128 | Streptomyces sp. R1128
BGC0000255.1 |  | 0.20 | Polyketide | pederin | Uncultured bacterium

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000839.1 |  | 0.65 | Other | flexirubin | Chitinophaga pinensis DSM 2588
BGC0001521.1 |  | 0.55 | NRP | auriculamide | Herpetosiphon aurantiacus DSM 785
BGC0001897.1 |  | 0.54 | Polyketide | cepacin A | Burkholderia ambifaria IOP40-10
BGC0000219.1 |  | 0.54 | Polyketide, Saccharide | elloramycin | Streptomyces olivaceus
BGC0000237.1 |  | 0.54 | Polyketide | lactonamycin Z | Streptomyces sanglieri
BGC0000272.1 |  | 0.53 | Polyketide | spore pigment | Streptomyces collinus
BGC0000248.1 |  | 0.53 | Polyketide | naphtocyclinone | Streptomyces arenae
BGC0001366.1 |  | 0.52 | Polyketide | BE-24566B, zunyimycin A | Streptomyces sp. FJS31-2
BGC0000261.1 |  | 0.52 | Polyketide | R1128 | Streptomyces sp. R1128
BGC0000255.1 |  | 0.52 | Polyketide | pederin | Uncultured bacterium

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names