GCF_003323815.1_ASM332381v1_genomic - 5 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_CP030880.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1	betalactone	1,807,004	1,836,084	fengycin	NRP	13%
Region 2	siderophore	1,885,892	1,900,964	acinetoferrin	NRP	70%
Region 3	arylpolyene	2,567,237	2,608,466	berninamycin A	RiPP	26%
Region 4	ectoine	2,864,359	2,874,772	ectoine	Other	75%
Region 5	redox-cofactor	3,029,499	3,051,689	lankacidin C	NRP + Polyketide	13%

NZ_CP030880.1 - Region 1 - betalactone

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Location: 1,807,004 - 1,836,084 nt. (total: 29,081 nt) Show pHMM detection rules used

betalactone: (HMGL-like and AMP-binding)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

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Pfam domains

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000662.1	0.21	Terpene	grixazone	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000258.1	0.20	Polyketide	prodigiosin	Serratia sp.
BGC0001897.1	0.20	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0001399.1	0.20	NRP	fellutamide B	Aspergillus nidulans FGSC A4
BGC0000890.1	0.20	Other (Aminocoumarin)	pentabromopseudilin	Pseudoalteromonas phenolica O-BC30
BGC0000891.1	0.20	Other (Aminocoumarin)	pentabromopseudilin	Pseudoalteromonas luteoviolacea 2ta16
BGC0000234.1	0.20	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0000259.1	0.20	Polyketide	prodigiosin	Serratia marcescens
BGC0000867.1	0.18	Other	polyhydroxyalkanoic acids	Ectothiorhodospira shaposhnikovii
BGC0000866.1	0.18	Other	polyhydroxyalkanoate	Burkholderia sp. DSM 9242

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000662.1	0.54	Terpene	grixazone	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000258.1	0.53	Polyketide	prodigiosin	Serratia sp.
BGC0001897.1	0.52	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0001399.1	0.52	NRP	fellutamide B	Aspergillus nidulans FGSC A4
BGC0000890.1	0.52	Other (Aminocoumarin)	pentabromopseudilin	Pseudoalteromonas phenolica O-BC30
BGC0000891.1	0.52	Other (Aminocoumarin)	pentabromopseudilin	Pseudoalteromonas luteoviolacea 2ta16
BGC0000234.1	0.52	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0000259.1	0.52	Polyketide	prodigiosin	Serratia marcescens
BGC0000867.1	0.49	Other	polyhydroxyalkanoic acids	Ectothiorhodospira shaposhnikovii
BGC0000866.1	0.49	Other	polyhydroxyalkanoate	Burkholderia sp. DSM 9242

Similar known gene clusters

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Detailed TIGRFAM domain annotation

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NZ_CP030880.1 - Region 2 - siderophore

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Location: 1,885,892 - 1,900,964 nt. (total: 15,073 nt) Show pHMM detection rules used

siderophore: IucA_IucC

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000295.1	0.50	NRP	acinetoferrin	Acinetobacter haemolyticus
BGC0001531.1	0.36	Other	bisucaberin B	Tenacibaculum mesophilum
BGC0001453.1	0.35	Other	desferrioxamine	Streptomyces argillaceus
BGC0001572.1	0.34	Other	desferrioxamine E	Pantoea agglomerans
BGC0000940.1	0.34	Other	desferrioxamin B, desferrioxamine E	Streptomyces coelicolor A3(2)
BGC0000942.1	0.27	Other	petrobactin	Bacillus anthracis str. Ames
BGC0001499.1	0.25	Other	aerobactin	Pantoea ananatis
BGC0001478.1	0.24	Other	desferrioxamine E	Streptomyces sp. ID38640
BGC0000941.1	0.23	Other	desferrioxamin B	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001498.1	0.21	Other	aerobactin	Xenorhabdus szentirmaii DSM 16338

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000295.1	0.79	NRP	acinetoferrin	Acinetobacter haemolyticus
BGC0001531.1	0.68	Other	bisucaberin B	Tenacibaculum mesophilum
BGC0001453.1	0.68	Other	desferrioxamine	Streptomyces argillaceus
BGC0001572.1	0.67	Other	desferrioxamine E	Pantoea agglomerans
BGC0000940.1	0.67	Other	desferrioxamin B, desferrioxamine E	Streptomyces coelicolor A3(2)
BGC0000942.1	0.60	Other	petrobactin	Bacillus anthracis str. Ames
BGC0001499.1	0.59	Other	aerobactin	Pantoea ananatis
BGC0001478.1	0.58	Other	desferrioxamine E	Streptomyces sp. ID38640
BGC0000941.1	0.57	Other	desferrioxamin B	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001498.1	0.54	Other	aerobactin	Xenorhabdus szentirmaii DSM 16338

Similar known gene clusters

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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NZ_CP030880.1 - Region 3 - arylpolyene

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Location: 2,567,237 - 2,608,466 nt. (total: 41,230 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000779.1	0.22	Saccharide	lipopolysaccharide	Aeromonas piscicola
BGC0000780.1	0.19	Saccharide	O&K-antigen	Vibrio parahaemolyticus
BGC0000905.1	0.15	Other	heme D1	Heliobacillus mobilis
BGC0000906.1	0.15	Other	heme D1	Heliophilum fasciatum
BGC0001897.1	0.15	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0001917.1	0.15	Polyketide	5-alkyl-1,2,3,4-tetrahydroquinolines, streptoaminals	Streptomyces nigrescens
BGC0001987.1	0.14	Polyketide	koreenceine A, koreenceine B, koreenceine C, koreenceine D	Pseudomonas koreensis
BGC0002008.1	0.14	Other	aryl polyenes	Xenorhabdus doucetiae
BGC0000836.1	0.13	Other	APE Ec	Escherichia coli CFT073
BGC0000252.1	0.13	Polyketide	nonactin	Streptomyces griseus subsp. griseus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000779.1	0.54	Saccharide	lipopolysaccharide	Aeromonas piscicola
BGC0000780.1	0.51	Saccharide	O&K-antigen	Vibrio parahaemolyticus
BGC0000905.1	0.45	Other	heme D1	Heliobacillus mobilis
BGC0000906.1	0.45	Other	heme D1	Heliophilum fasciatum
BGC0001897.1	0.44	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0001917.1	0.44	Polyketide	5-alkyl-1,2,3,4-tetrahydroquinolines, streptoaminals	Streptomyces nigrescens
BGC0001987.1	0.44	Polyketide	koreenceine A, koreenceine B, koreenceine C, koreenceine D	Pseudomonas koreensis
BGC0002008.1	0.43	Other	aryl polyenes	Xenorhabdus doucetiae
BGC0000836.1	0.42	Other	APE Ec	Escherichia coli CFT073
BGC0000252.1	0.41	Polyketide	nonactin	Streptomyces griseus subsp. griseus

Similar known gene clusters

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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NZ_CP030880.1 - Region 4 - ectoine

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Location: 2,864,359 - 2,874,772 nt. (total: 10,414 nt) Show pHMM detection rules used

ectoine: ectoine_synt

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000853.1	0.41	Other	ectoine	Streptomyces anulatus
BGC0000856.1	0.40	Other	ectoine	Methylophaga thalassica
BGC0000852.1	0.39	Other	ectoine	Sporosarcina pasteurii
BGC0000858.1	0.34	Other	ectoine	Methylobacter marinus
BGC0000859.1	0.34	Other	ectoine	Methylomicrobium alcaliphilum
BGC0000855.1	0.33	Other	ectoine	Methylomicrobium kenyense
BGC0000857.1	0.31	Other	ectoine	Methylophaga alcalica
BGC0000860.1	0.30	Other	ectoine	Methylarcula marina
BGC0000854.1	0.29	Other	ectoine	Methylomicrobium alcaliphilum 20Z
BGC0000895.1	0.13	Other	citrulline	Lactobacillus plantarum subsp. plantarum

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000853.1	0.73	Other	ectoine	Streptomyces anulatus
BGC0000856.1	0.72	Other	ectoine	Methylophaga thalassica
BGC0000852.1	0.71	Other	ectoine	Sporosarcina pasteurii
BGC0000858.1	0.67	Other	ectoine	Methylobacter marinus
BGC0000859.1	0.67	Other	ectoine	Methylomicrobium alcaliphilum
BGC0000855.1	0.67	Other	ectoine	Methylomicrobium kenyense
BGC0000857.1	0.64	Other	ectoine	Methylophaga alcalica
BGC0000860.1	0.64	Other	ectoine	Methylarcula marina
BGC0000854.1	0.63	Other	ectoine	Methylomicrobium alcaliphilum 20Z
BGC0000895.1	0.42	Other	citrulline	Lactobacillus plantarum subsp. plantarum

Similar known gene clusters

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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NZ_CP030880.1 - Region 5 - redox-cofactor

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Location: 3,029,499 - 3,051,689 nt. (total: 22,191 nt) Show pHMM detection rules used

redox-cofactor: (cds(PF04055 and (TIGR04085 or SPASM)) and (TIGR02111 or TIGR03966) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000906.1	0.13	Other	heme D1	Heliophilum fasciatum
BGC0000905.1	0.13	Other	heme D1	Heliobacillus mobilis
BGC0001100.1	0.09	NRP, Polyketide	lankacidin C	Streptomyces rochei
BGC0001127.1	0.07	NRP	jagaricin	Janthinobacterium agaricidamnosum
BGC0001365.1	0.07	NRP	clapurines	Claviceps purpurea 20.1
BGC0000321.1	0.06	NRP	chaetocin	Collariella virescens
BGC0000292.1	0.06	NRP	acetylaranotin	Aspergillus terreus NIH2624
BGC0001555.1	0.05	RiPP	colicin V	Escherichia coli chi7122
BGC0000361.1	0.05	NRP	gliotoxin, bisdethiobis(methylthio)gliotoxin	Aspergillus fumigatus Af293
BGC0000135.1	0.04	Polyketide	reveromycin A	Streptomyces sp. SN-593

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000906.1	0.41	Other	heme D1	Heliophilum fasciatum
BGC0000905.1	0.41	Other	heme D1	Heliobacillus mobilis
BGC0001100.1	0.34	NRP, Polyketide	lankacidin C	Streptomyces rochei
BGC0001127.1	0.28	NRP	jagaricin	Janthinobacterium agaricidamnosum
BGC0001365.1	0.28	NRP	clapurines	Claviceps purpurea 20.1
BGC0000321.1	0.25	NRP	chaetocin	Collariella virescens
BGC0000292.1	0.24	NRP	acetylaranotin	Aspergillus terreus NIH2624
BGC0001555.1	0.23	RiPP	colicin V	Escherichia coli chi7122
BGC0000361.1	0.23	NRP	gliotoxin, bisdethiobis(methylthio)gliotoxin	Aspergillus fumigatus Af293
BGC0000135.1	0.17	Polyketide	reveromycin A	Streptomyces sp. SN-593

Similar known gene clusters

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

Selected features only

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