GCF_900458255.1_44343_D01_genomic - 4 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_UHDA01000001 (original name was: NZ_UHDA01000001.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	T3PKS	415,358	456,530	capsular polysaccharide	Saccharide:Exopolysaccharide	3%
Region 2.2	siderophore	785,805	800,785	staphyloferrin A	Other:Non-NRP siderophore	100%
Region 2.3	cyclic-lactone-autoinducer	932,593	953,302	kijanimicin	Polyketide	4%
Region 2.4	terpene	1,216,414	1,237,235

No secondary metabolite regions were found in these records:: NZ_UHDA01000002 (original name was: NZ_UHDA01000002.1)

Compact view

c00002_NZ_UHDA.. - Region 1 - T3PKS

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Location: 415,358 - 456,530 nt. (total: 41,173 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000286.1	0.22	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0000255.1	0.17	Polyketide	pederin	Uncultured bacterium
BGC0000866.1	0.17	Other	polyhydroxyalkanoate	Burkholderia sp. DSM 9242
BGC0000867.1	0.17	Other	polyhydroxyalkanoic acids	Ectothiorhodospira shaposhnikovii
BGC0000679.1	0.16	Terpene	diazepinomicin	Micromonospora sp. M42
BGC0001104.1	0.16	NRP, Polyketide	myxovirescin A1	Myxococcus xanthus DK 1622
BGC0001739.1	0.16	Other	phosphonoacetic Acid	Streptomyces sp. NRRL F-525
BGC0000922.1	0.16	Other	pseudomonas quinolone signal (PQS)	Pseudomonas aeruginosa PAO1
BGC0000934.1	0.16	Other (Phenazine)	5-acetyl-5,10-dihydrophenazine-1-carboxylic acid, 5-(2-hydroxyacetyl)-5,10-dihydrophenazine-1-carboxylic acid, endophenazine A1, endophenazine F, endophenazine G	Kitasatospora sp. HKI 714
BGC0000205.1	0.16	Polyketide	bryostatin	Candidatus Endobugula sertula

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000286.1	0.55	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0000255.1	0.48	Polyketide	pederin	Uncultured bacterium
BGC0000866.1	0.48	Other	polyhydroxyalkanoate	Burkholderia sp. DSM 9242
BGC0000867.1	0.48	Other	polyhydroxyalkanoic acids	Ectothiorhodospira shaposhnikovii
BGC0000679.1	0.47	Terpene	diazepinomicin	Micromonospora sp. M42
BGC0001104.1	0.47	NRP, Polyketide	myxovirescin A1	Myxococcus xanthus DK 1622
BGC0001739.1	0.47	Other	phosphonoacetic Acid	Streptomyces sp. NRRL F-525
BGC0000922.1	0.46	Other	pseudomonas quinolone signal (PQS)	Pseudomonas aeruginosa PAO1
BGC0000934.1	0.46	Other (Phenazine)	5-acetyl-5,10-dihydrophenazine-1-carboxylic acid, 5-(2-hydroxyacetyl)-5,10-dihydrophenazine-1-carboxylic acid, endophenazine A1, endophenazine F, endophenazine G	Kitasatospora sp. HKI 714
BGC0000205.1	0.46	Polyketide	bryostatin	Candidatus Endobugula sertula

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c00002_NZ_UHDA.. - Region 2 - siderophore

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Location: 785,805 - 800,785 nt. (total: 14,981 nt) Show pHMM detection rules used

siderophore: IucA_IucC

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Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000944.1	0.53	Other (Non-NRP siderophore)	staphyloferrin A	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0000939.1	0.31	Other	aerobactin	Grimontia hollisae
BGC0001870.1	0.22	Other	putrebactin, avaroferrin	Xenorhabdus budapestensis
BGC0000947.1	0.19	Other	vibrioferrin	Vibrio alginolyticus
BGC0000883.1	0.16	Other	arginomycin	Streptomyces arginensis
BGC0000943.1	0.15	Other	staphylobactin	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0001783.1	0.14	Other	streptonigrin	Streptomyces flocculus
BGC0001767.1	0.09	NRP	salinichelins	Salinispora pacifica CNY331
BGC0000423.1	0.09	NRP	scabichelin	Streptomyces scabiei 87.22
BGC0001600.1	0.09	Polyketide	fusarielin H	Fusarium graminearum

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000944.1	0.80	Other (Non-NRP siderophore)	staphyloferrin A	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0000939.1	0.64	Other	aerobactin	Grimontia hollisae
BGC0001870.1	0.55	Other	putrebactin, avaroferrin	Xenorhabdus budapestensis
BGC0000947.1	0.51	Other	vibrioferrin	Vibrio alginolyticus
BGC0000883.1	0.46	Other	arginomycin	Streptomyces arginensis
BGC0000943.1	0.44	Other	staphylobactin	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0001783.1	0.43	Other	streptonigrin	Streptomyces flocculus
BGC0001767.1	0.34	NRP	salinichelins	Salinispora pacifica CNY331
BGC0000423.1	0.33	NRP	scabichelin	Streptomyces scabiei 87.22
BGC0001600.1	0.32	Polyketide	fusarielin H	Fusarium graminearum

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c00002_NZ_UHDA.. - Region 3 - cyclic-lactone-autoinducer

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Location: 932,593 - 953,302 nt. (total: 20,710 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

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Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001291.1	0.22	RiPP	enterocin NKR-5-3B	Enterococcus faecium
BGC0001618.1	0.16	RiPP	hyicin 3682	Staphylococcus hyicus
BGC0001863.1	0.16	RiPP, Terpene	bacillicn CER074	Bacillus mycoides
BGC0000504.1	0.15	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000566.1	0.15	RiPP	streptolysin S	Streptococcus pyogenes M1 GAS
BGC0001222.1	0.15	RiPP	acidocin B	Lactobacillus acidophilus
BGC0000491.1	0.15	RiPP	gassericin A	Lactobacillus gasseri
BGC0000616.1	0.15	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0001743.1	0.15	RiPP	plantaricyclin	Lactobacillus plantarum
BGC0001120.1	0.15	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001291.1	0.55	RiPP	enterocin NKR-5-3B	Enterococcus faecium
BGC0001618.1	0.46	RiPP	hyicin 3682	Staphylococcus hyicus
BGC0001863.1	0.46	RiPP, Terpene	bacillicn CER074	Bacillus mycoides
BGC0000504.1	0.46	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000566.1	0.46	RiPP	streptolysin S	Streptococcus pyogenes M1 GAS
BGC0001222.1	0.46	RiPP	acidocin B	Lactobacillus acidophilus
BGC0000491.1	0.46	RiPP	gassericin A	Lactobacillus gasseri
BGC0000616.1	0.45	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0001743.1	0.45	RiPP	plantaricyclin	Lactobacillus plantarum
BGC0001120.1	0.45	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264

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c00002_NZ_UHDA.. - Region 4 - terpene

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Location: 1,216,414 - 1,237,235 nt. (total: 20,822 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

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Analysis type:

Reference	terpene	Similarity score	Type	Compound(s)	Organism
BGC0001839.1		0.31	Terpene	squalestatin S1	Aspergillus sp. Z5
BGC0001005.1		0.04	NRP, Polyketide	locillomycin	Bacillus subtilis

Reference	Aggregated	Similarity score	Type	Compound(s)	Organism
BGC0001839.1		0.65	Terpene	squalestatin S1	Aspergillus sp. Z5
BGC0001005.1		0.18	NRP, Polyketide	locillomycin	Bacillus subtilis

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No matches found.

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