GCF_000621585.1_ASM62158v1_genomic - 5 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_JHXY01000005 (original name was: NZ_JHXY01000005.1)

Region	Type	From	To
Region 2.1	ranthipeptide	29,558	49,636
Region 2.2	lassopeptide,RRE-containing	190,854	226,400
Region 2.3	ranthipeptide	241,241	272,299

NZ_JHXY01000007 (original name was: NZ_JHXY01000007.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	RRE-containing	219,698	235,874

NZ_JHXY01000022 (original name was: NZ_JHXY01000022.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 16.1	NRPS	1	32,462

Region	Type	From	To	Similarity
Region 2.1	ranthipeptide	29,558	49,636
Region 2.2	lassopeptide,RRE-containing	190,854	226,400
Region 2.3	ranthipeptide	241,241	272,299
Region 4.1	RRE-containing	219,698	235,874
Region 16.1	NRPS	1	32,462

No secondary metabolite regions were found in these records:: NZ_KK211309.1; NZ_JHXY01000006 (original name was: NZ_JHXY01000006.1); NZ_KK211310.1; NZ_JHXY01000010 (original name was: NZ_JHXY01000010.1); NZ_JHXY01000011 (original name was: NZ_JHXY01000011.1); NZ_JHXY01000012 (original name was: NZ_JHXY01000012.1); NZ_KK211311.1; NZ_JHXY01000015 (original name was: NZ_JHXY01000015.1); NZ_JHXY01000016 (original name was: NZ_JHXY01000016.1); NZ_JHXY01000017 (original name was: NZ_JHXY01000017.1); NZ_JHXY01000018 (original name was: NZ_JHXY01000018.1); NZ_JHXY01000019 (original name was: NZ_JHXY01000019.1); NZ_KK211312.1; NZ_JHXY01000023 (original name was: NZ_JHXY01000023.1); NZ_JHXY01000024 (original name was: NZ_JHXY01000024.1); NZ_KK211313.1; NZ_JHXY01000027 (original name was: NZ_JHXY01000027.1); NZ_JHXY01000028 (original name was: NZ_JHXY01000028.1); NZ_KK211314.1; NZ_JHXY01000031 (original name was: NZ_JHXY01000031.1); NZ_JHXY01000032 (original name was: NZ_JHXY01000032.1); NZ_JHXY01000033 (original name was: NZ_JHXY01000033.1); NZ_JHXY01000034 (original name was: NZ_JHXY01000034.1); NZ_JHXY01000035 (original name was: NZ_JHXY01000035.1); NZ_JHXY01000036 (original name was: NZ_JHXY01000036.1); NZ_JHXY01000037 (original name was: NZ_JHXY01000037.1); NZ_JHXY01000038 (original name was: NZ_JHXY01000038.1); NZ_JHXY01000039 (original name was: NZ_JHXY01000039.1); NZ_JHXY01000040 (original name was: NZ_JHXY01000040.1); NZ_JHXY01000041 (original name was: NZ_JHXY01000041.1); NZ_JHXY01000042 (original name was: NZ_JHXY01000042.1); NZ_JHXY01000043 (original name was: NZ_JHXY01000043.1); NZ_JHXY01000044 (original name was: NZ_JHXY01000044.1); NZ_JHXY01000045 (original name was: NZ_JHXY01000045.1); NZ_JHXY01000046 (original name was: NZ_JHXY01000046.1); NZ_JHXY01000047 (original name was: NZ_JHXY01000047.1); NZ_JHXY01000048 (original name was: NZ_JHXY01000048.1); NZ_JHXY01000049 (original name was: NZ_JHXY01000049.1); NZ_JHXY01000050 (original name was: NZ_JHXY01000050.1); NZ_JHXY01000051 (original name was: NZ_JHXY01000051.1); NZ_JHXY01000052 (original name was: NZ_JHXY01000052.1); NZ_JHXY01000053 (original name was: NZ_JHXY01000053.1); NZ_JHXY01000054 (original name was: NZ_JHXY01000054.1); NZ_JHXY01000055 (original name was: NZ_JHXY01000055.1); NZ_JHXY01000056 (original name was: NZ_JHXY01000056.1); NZ_JHXY01000057 (original name was: NZ_JHXY01000057.1); NZ_JHXY01000058 (original name was: NZ_JHXY01000058.1); NZ_JHXY01000059 (original name was: NZ_JHXY01000059.1); NZ_JHXY01000060 (original name was: NZ_JHXY01000060.1); NZ_JHXY01000061 (original name was: NZ_JHXY01000061.1); NZ_JHXY01000062 (original name was: NZ_JHXY01000062.1); NZ_JHXY01000063 (original name was: NZ_JHXY01000063.1); NZ_JHXY01000064 (original name was: NZ_JHXY01000064.1); NZ_JHXY01000065 (original name was: NZ_JHXY01000065.1); NZ_JHXY01000066 (original name was: NZ_JHXY01000066.1); NZ_JHXY01000067 (original name was: NZ_JHXY01000067.1); NZ_JHXY01000068 (original name was: NZ_JHXY01000068.1); NZ_JHXY01000069 (original name was: NZ_JHXY01000069.1); NZ_JHXY01000070 (original name was: NZ_JHXY01000070.1); NZ_JHXY01000071 (original name was: NZ_JHXY01000071.1); NZ_JHXY01000072 (original name was: NZ_JHXY01000072.1); NZ_JHXY01000073 (original name was: NZ_JHXY01000073.1); NZ_JHXY01000074 (original name was: NZ_JHXY01000074.1); NZ_JHXY01000075 (original name was: NZ_JHXY01000075.1); NZ_JHXY01000076 (original name was: NZ_JHXY01000076.1); NZ_JHXY01000077 (original name was: NZ_JHXY01000077.1); NZ_JHXY01000078 (original name was: NZ_JHXY01000078.1); NZ_JHXY01000079 (original name was: NZ_JHXY01000079.1); NZ_JHXY01000080 (original name was: NZ_JHXY01000080.1); NZ_JHXY01000081 (original name was: NZ_JHXY01000081.1); NZ_JHXY01000082 (original name was: NZ_JHXY01000082.1); NZ_JHXY01000083 (original name was: NZ_JHXY01000083.1); NZ_JHXY01000084 (original name was: NZ_JHXY01000084.1); NZ_JHXY01000085 (original name was: NZ_JHXY01000085.1)

Compact view

c00002_NZ_JHXY.. - Region 1 - ranthipeptide

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Location: 29,558 - 49,636 nt. (total: 20,079 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001387.1	0.17	Other	nucleocidin	Streptomyces calvus
BGC0000805.1	0.13	Saccharide	moenomycin	Streptomyces viridosporus ATCC 14672
BGC0001411.1	0.13	Saccharide	polysaccharide B	Bacteroides fragilis
BGC0000353.1	0.12	NRP	tacrolimus	Streptomyces sp. MA6548
BGC0001544.1	0.10	NRP, Polyketide	chlorflavonin	Aspergillus campestris IBT 28561
BGC0001298.1	0.09	Polyketide	4-Z-annimycin	Streptomyces calvus
BGC0001502.1	0.08	NRP	amonabactin P 750	Aeromonas hydrophila subsp. hydrophila ATCC 7966
BGC0001103.1	0.08	NRP, Polyketide	mycosubtilin	Bacillus subtilis subsp. spizizenii ATCC 6633
BGC0001007.1	0.08	Polyketide, NRP	lymphostin, neolymphostinol B, lymphostinol, neolymphostin b	Salinispora arenicola CNS-205
BGC0001006.1	0.07	NRP, Polyketide	lymphostin, neolymphostinol B, lymphostinol, neolymphostin B	Salinispora tropica CNB-440

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001387.1	0.47	Other	nucleocidin	Streptomyces calvus
BGC0000805.1	0.42	Saccharide	moenomycin	Streptomyces viridosporus ATCC 14672
BGC0001411.1	0.41	Saccharide	polysaccharide B	Bacteroides fragilis
BGC0000353.1	0.39	NRP	tacrolimus	Streptomyces sp. MA6548
BGC0001544.1	0.36	NRP, Polyketide	chlorflavonin	Aspergillus campestris IBT 28561
BGC0001298.1	0.33	Polyketide	4-Z-annimycin	Streptomyces calvus
BGC0001502.1	0.31	NRP	amonabactin P 750	Aeromonas hydrophila subsp. hydrophila ATCC 7966
BGC0001103.1	0.30	NRP, Polyketide	mycosubtilin	Bacillus subtilis subsp. spizizenii ATCC 6633
BGC0001007.1	0.30	Polyketide, NRP	lymphostin, neolymphostinol B, lymphostinol, neolymphostin b	Salinispora arenicola CNS-205
BGC0001006.1	0.29	NRP, Polyketide	lymphostin, neolymphostinol B, lymphostinol, neolymphostin B	Salinispora tropica CNB-440

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

c00002_NZ_JHXY.. - Region 2 - RRE-containing,lassopeptide

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Location: 190,854 - 226,400 nt. (total: 35,547 nt) Show pHMM detection rules used

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)
RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Lasso peptides

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000748.1	0.30	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000740.1	0.30	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000747.1	0.30	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000746.1	0.30	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000744.1	0.30	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000745.1	0.30	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000741.1	0.30	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000770.1	0.29	Saccharide	lipo-oligosaccharide	Campylobacter jejuni
BGC0000737.1	0.28	Saccharide	capsular polysaccharide	Pasteurella multocida
BGC0000790.1	0.28	Saccharide	O-antigen	Escherichia coli

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000776.1	0.46	Saccharide	lipopolysaccharide	Escherichia coli
BGC0000748.1	0.46	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000740.1	0.46	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000747.1	0.46	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000746.1	0.46	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000744.1	0.45	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000745.1	0.45	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000741.1	0.45	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000737.1	0.45	Saccharide	capsular polysaccharide	Pasteurella multocida
BGC0000777.1	0.44	Saccharide	lipopolysaccharide	Escherichia coli

Similar known gene clusters

No matches found.

Lasso peptide predictions

Lassopeptides - No core peptides found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

Lasso peptides

Core peptide predictions

No core peptides found.

c00002_NZ_JHXY.. - Region 3 - ranthipeptide

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Location: 241,241 - 272,299 nt. (total: 31,059 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001733.1	0.19	RiPP	PcpA	Pleurocapsa sp. PCC 7327
BGC0000601.1	0.18	RiPP	sporulation killing factor	Bacillus subtilis subsp. subtilis str. 168
BGC0000763.1	0.17	Saccharide	stewartan	Pantoea stewartii subsp. stewartii DC283
BGC0001494.1	0.17	RiPP	acinetodin	Acinetobacter gyllenbergii CIP 110306
BGC0001779.1	0.17	RiPP	siamycin	Streptomyces nodosus
BGC0000768.1	0.16	Saccharide	gellan polysaccharide	Sphingomonas elodea ATCC 31461
BGC0000748.1	0.16	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000740.1	0.16	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000747.1	0.16	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000746.1	0.16	Saccharide	capsular polysaccharide	Streptococcus agalactiae

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001733.1	0.51	RiPP	PcpA	Pleurocapsa sp. PCC 7327
BGC0000601.1	0.50	RiPP	sporulation killing factor	Bacillus subtilis subsp. subtilis str. 168
BGC0000763.1	0.48	Saccharide	stewartan	Pantoea stewartii subsp. stewartii DC283
BGC0001494.1	0.48	RiPP	acinetodin	Acinetobacter gyllenbergii CIP 110306
BGC0001779.1	0.48	RiPP	siamycin	Streptomyces nodosus
BGC0000768.1	0.47	Saccharide	gellan polysaccharide	Sphingomonas elodea ATCC 31461
BGC0000748.1	0.47	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000740.1	0.47	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000747.1	0.47	Saccharide	capsular polysaccharide	Streptococcus agalactiae
BGC0000746.1	0.47	Saccharide	capsular polysaccharide	Streptococcus agalactiae

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

c00004_NZ_JHXY.. - Region 1 - RRE-containing

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Location: 219,698 - 235,874 nt. (total: 16,177 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	RRE-containing	Similarity score	Type	Compound(s)	Organism
BGC0001586.1		0.13	Saccharide	EPS273	Pseudomonas stutzeri

Reference	Aggregated	Similarity score	Type	Compound(s)	Organism
BGC0001586.1		0.42	Saccharide	EPS273	Pseudomonas stutzeri

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

c00016_NZ_JHXY.. - Region 1 - NRPS

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Location: 1 - 32,462 nt. (total: 32,462 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

Pfam domains

TIGRFAM domains

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000460.1	0.31	NRP	vulnibactin	Vibrio vulnificus CMCP6
BGC0001123.1	0.29	NRP	aspirochlorine	Aspergillus oryzae RIB40
BGC0000321.1	0.28	NRP	chaetocin	Collariella virescens
BGC0001585.1	0.26	Alkaloid	melinacidin IV	Escovopsis weberi
BGC0001873.1	0.25	NRP	pyrrolizixenamide A	Xenorhabdus szentirmaii DSM 16338
BGC0001735.1	0.25	Other	pentostatine, vidarabine	Streptomyces antibioticus
BGC0001343.1	0.25	Polyketide	aurachin A, aurachin D	Stigmatella aurantiaca Sg a15
BGC0001895.1	0.25	Polyketide	huanglongmycin A, huanglongmycin B, huanglongmycin C	Streptomyces sp. CB09001
BGC0002000.1	0.24	Polyketide	setomimycin	Streptomyces aurantiacus JA 4570
BGC0000343.1	0.24	NRP	enterobactin	Pseudomonas sp. J465

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000460.1	0.64	NRP	vulnibactin	Vibrio vulnificus CMCP6
BGC0001123.1	0.63	NRP	aspirochlorine	Aspergillus oryzae RIB40
BGC0000321.1	0.62	NRP	chaetocin	Collariella virescens
BGC0001585.1	0.59	Alkaloid	melinacidin IV	Escovopsis weberi
BGC0001873.1	0.59	NRP	pyrrolizixenamide A	Xenorhabdus szentirmaii DSM 16338
BGC0001735.1	0.59	Other	pentostatine, vidarabine	Streptomyces antibioticus
BGC0001343.1	0.59	Polyketide	aurachin A, aurachin D	Stigmatella aurantiaca Sg a15
BGC0001895.1	0.59	Polyketide	huanglongmycin A, huanglongmycin B, huanglongmycin C	Streptomyces sp. CB09001
BGC0002000.1	0.58	Polyketide	setomimycin	Streptomyces aurantiacus JA 4570
BGC0000343.1	0.57	NRP	enterobactin	Pseudomonas sp. J465

Similar known gene clusters

No matches found.

Module view

Legend

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 32462:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (cys)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg16_7

Search NORINE for peptide: strict or relaxed

AMP-binding (19..413): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: gfpyLgTgAK
Nearest Stachelhaus code:: ala
Stachelhaus code match:: 40% (weak)

ctg16_9

Search NORINE for peptide: strict or relaxed

AMP-binding (13..415): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: dhb, sal
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: aFPSlGVtfK
Nearest Stachelhaus code:: pip
Stachelhaus code match:: 60% (weak)

ctg16_12

Search NORINE for peptide: strict or relaxed

AMP-binding (450..855): cys

NRPSPredictor2: cys

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: cys
Small clusters prediction:: cys
Single AA prediction:: cys

Stachelhaus prediction details:

Stachelhaus sequence:: DmYNigvIWK
Nearest Stachelhaus code:: cys
Stachelhaus code match:: 60% (weak)