GCF_900112405.1_IMG-taxon_2603880187_annotated_assembly_genomic - 3 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_FOLI01000001 (original name was: NZ_FOLI01000001.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	T3PKS	343,765	384,934

NZ_FOLI01000002 (original name was: NZ_FOLI01000002.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	RiPP-like	38,984	51,146

NZ_FOLI01000003 (original name was: NZ_FOLI01000003.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RiPP-like	17,670	28,109

Region	Type	From	To	Similarity
Region 7.1	T3PKS	343,765	384,934
Region 8.1	RiPP-like	38,984	51,146
Region 11.1	RiPP-like	17,670	28,109

No secondary metabolite regions were found in these records:: NZ_FOLI01000017 (original name was: NZ_FOLI01000017.1); NZ_FOLI01000016 (original name was: NZ_FOLI01000016.1); NZ_FOLI01000015 (original name was: NZ_FOLI01000015.1); NZ_FOLI01000014 (original name was: NZ_FOLI01000014.1); NZ_FOLI01000013 (original name was: NZ_FOLI01000013.1); NZ_FOLI01000011 (original name was: NZ_FOLI01000011.1); NZ_FOLI01000004 (original name was: NZ_FOLI01000004.1); NZ_FOLI01000012 (original name was: NZ_FOLI01000012.1); NZ_FOLI01000005 (original name was: NZ_FOLI01000005.1); NZ_FOLI01000009 (original name was: NZ_FOLI01000009.1); NZ_FOLI01000008 (original name was: NZ_FOLI01000008.1); NZ_FOLI01000006 (original name was: NZ_FOLI01000006.1); NZ_FOLI01000007 (original name was: NZ_FOLI01000007.1); NZ_FOLI01000010 (original name was: NZ_FOLI01000010.1)

Compact view

c00007_NZ_FOLI.. - Region 1 - T3PKS

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Location: 343,765 - 384,934 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000887.1	0.17	Alkaloid	saxitoxin, gonyautoxin 2, gonyautoxin 3, toxin C2, toxin C3, gonyautoxin 5, decarbamoylsaxitoxin, decarbamoylgonyautoxin 2, decarbamoylgonyautoxin 3	Dolichospermum circinale AWQC131C
BGC0001120.1	0.16	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000286.1	0.16	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0000626.1	0.16	RiPP	thuricin	Bacillus thuringiensis
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000561.1	0.15	RiPP	thermophilin 1277	Streptococcus thermophilus
BGC0000498.1	0.15	RiPP	bovicin HJ50	Streptococcus equinus
BGC0000539.1	0.15	RiPP	nukacin ISK-1	Staphylococcus warneri
BGC0001210.1	0.15	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0001850.1	0.15	Other (Shikimate-derived)	diazaquinomycin A, diazaquinomycin E, diazaquinomycin F, diazaquinomycin G	Streptomyces sp. F001

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000887.1	0.49	Alkaloid	saxitoxin, gonyautoxin 2, gonyautoxin 3, toxin C2, toxin C3, gonyautoxin 5, decarbamoylsaxitoxin, decarbamoylgonyautoxin 2, decarbamoylgonyautoxin 3	Dolichospermum circinale AWQC131C
BGC0001120.1	0.47	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000286.1	0.46	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0000626.1	0.46	RiPP	thuricin	Bacillus thuringiensis
BGC0000554.1	0.46	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000561.1	0.45	RiPP	thermophilin 1277	Streptococcus thermophilus
BGC0000498.1	0.45	RiPP	bovicin HJ50	Streptococcus equinus
BGC0000539.1	0.45	RiPP	nukacin ISK-1	Staphylococcus warneri
BGC0001210.1	0.45	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0001850.1	0.45	Other (Shikimate-derived)	diazaquinomycin A, diazaquinomycin E, diazaquinomycin F, diazaquinomycin G	Streptomyces sp. F001

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00008_NZ_FOLI.. - Region 1 - RiPP-like

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Location: 38,984 - 51,146 nt. (total: 12,163 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000617.1	0.21	RiPP	coagulin	Bacillus coagulans
BGC0000558.1	0.16	RiPP	sublancin 168	Bacillus subtilis subsp. subtilis str. 168
BGC0001862.1	0.16	RiPP	geocillicin	Aeribacillus pallidus
BGC0001930.1	0.16	RiPP	pallidocin	Aeribacillus pallidus
BGC0001863.1	0.16	RiPP, Terpene	bacillicn CER074	Bacillus mycoides
BGC0001861.1	0.15	RiPP	bacillicin BAG2O	Bacillus cereus BAG2O-1
BGC0001388.1	0.15	RiPP	gassericin E	Lactobacillus gasseri
BGC0000619.1	0.15	RiPP	gassericin T	Lactobacillus gasseri
BGC0001602.1	0.15	RiPP	gassericin-T	Lactobacillus gasseri
BGC0000584.1	0.14	RiPP	colicin V	Escherichia coli

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000617.1	0.53	RiPP	coagulin	Bacillus coagulans
BGC0000558.1	0.46	RiPP	sublancin 168	Bacillus subtilis subsp. subtilis str. 168
BGC0001862.1	0.46	RiPP	geocillicin	Aeribacillus pallidus
BGC0001930.1	0.46	RiPP	pallidocin	Aeribacillus pallidus
BGC0001863.1	0.46	RiPP, Terpene	bacillicn CER074	Bacillus mycoides
BGC0001861.1	0.46	RiPP	bacillicin BAG2O	Bacillus cereus BAG2O-1
BGC0001388.1	0.45	RiPP	gassericin E	Lactobacillus gasseri
BGC0000619.1	0.45	RiPP	gassericin T	Lactobacillus gasseri
BGC0001602.1	0.45	RiPP	gassericin-T	Lactobacillus gasseri
BGC0000584.1	0.44	RiPP	colicin V	Escherichia coli

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00011_NZ_FOLI.. - Region 1 - RiPP-like

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Location: 17,670 - 28,109 nt. (total: 10,440 nt) Show pHMM detection rules used

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001601.1	0.38	RiPP	gassericin-S	Lactobacillus gasseri
BGC0000803.1	0.13	Saccharide	GG exopolysaccharide	Lactobacillus rhamnosus GG
BGC0001791.1	0.05	NRP	sunshinamide	Gynuella sunshinyii YC6258
BGC0001543.1	0.04	Polyketide	chejuenolide A, chejuenolide B	Hahella chejuensis
BGC0001590.1	0.03	Polyketide	formicamycins A-M	Streptomyces sp. KY5

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001601.1	0.71	RiPP	gassericin-S	Lactobacillus gasseri
BGC0000803.1	0.42	Saccharide	GG exopolysaccharide	Lactobacillus rhamnosus GG
BGC0001791.1	0.21	NRP	sunshinamide	Gynuella sunshinyii YC6258
BGC0001543.1	0.17	Polyketide	chejuenolide A, chejuenolide B	Hahella chejuensis
BGC0001590.1	0.15	Polyketide	formicamycins A-M	Streptomyces sp. KY5

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names