Select genomic region:
Overview
6.1
32.1

### Identified secondary metabolite regions using strictness 'relaxed'

NZ_AOMC01000008 (original name was: NZ_AOMC01000008.1)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 6.1 | terpene | 1,985 | 17,321 |

NZ_AOMC01000046 (original name was: NZ_AOMC01000046.1)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 32.1 | terpene | 14,698 | 35,747 |

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 6.1 | terpene | 1,985 | 17,321 |
Region 32.1 | terpene | 14,698 | 35,747 |

No secondary metabolite regions were found in these records:
  NZ_AOMC01000002 (original name was: NZ_AOMC01000002.1)
  NZ_AOMC01000003 (original name was: NZ_AOMC01000003.1)
  NZ_AOMC01000005 (original name was: NZ_AOMC01000005.1)
  NZ_AOMC01000006 (original name was: NZ_AOMC01000006.1)
  NZ_AOMC01000007 (original name was: NZ_AOMC01000007.1)
  NZ_AOMC01000009 (original name was: NZ_AOMC01000009.1)
  NZ_AOMC01000012 (original name was: NZ_AOMC01000012.1)
  NZ_AOMC01000014 (original name was: NZ_AOMC01000014.1)
  NZ_AOMC01000015 (original name was: NZ_AOMC01000015.1)
  NZ_AOMC01000016 (original name was: NZ_AOMC01000016.1)
  NZ_AOMC01000018 (original name was: NZ_AOMC01000018.1)
  NZ_AOMC01000019 (original name was: NZ_AOMC01000019.1)
  NZ_AOMC01000021 (original name was: NZ_AOMC01000021.1)
  NZ_AOMC01000022 (original name was: NZ_AOMC01000022.1)
  NZ_AOMC01000023 (original name was: NZ_AOMC01000023.1)
  NZ_AOMC01000024 (original name was: NZ_AOMC01000024.1)
  NZ_AOMC01000025 (original name was: NZ_AOMC01000025.1)
  NZ_AOMC01000026 (original name was: NZ_AOMC01000026.1)
  NZ_AOMC01000028 (original name was: NZ_AOMC01000028.1)
  NZ_AOMC01000030 (original name was: NZ_AOMC01000030.1)
  NZ_AOMC01000031 (original name was: NZ_AOMC01000031.1)
  NZ_AOMC01000032 (original name was: NZ_AOMC01000032.1)
  NZ_AOMC01000033 (original name was: NZ_AOMC01000033.1)
  NZ_AOMC01000034 (original name was: NZ_AOMC01000034.1)
  NZ_AOMC01000035 (original name was: NZ_AOMC01000035.1)
  NZ_AOMC01000036 (original name was: NZ_AOMC01000036.1)
  NZ_AOMC01000038 (original name was: NZ_AOMC01000038.1)
  NZ_AOMC01000039 (original name was: NZ_AOMC01000039.1)
  NZ_AOMC01000040 (original name was: NZ_AOMC01000040.1)
  NZ_AOMC01000043 (original name was: NZ_AOMC01000043.1)
  NZ_AOMC01000047 (original name was: NZ_AOMC01000047.1)
  NZ_AOMC01000048 (original name was: NZ_AOMC01000048.1)
  NZ_AOMC01000049 (original name was: NZ_AOMC01000049.1)
  NZ_AOMC01000051 (original name was: NZ_AOMC01000051.1)
  NZ_AOMC01000052 (original name was: NZ_AOMC01000052.1)
  NZ_AOMC01000054 (original name was: NZ_AOMC01000054.1)
  NZ_AOMC01000055 (original name was: NZ_AOMC01000055.1)
  NZ_AOMC01000056 (original name was: NZ_AOMC01000056.1)
  NZ_AOMC01000060 (original name was: NZ_AOMC01000060.1)
  NZ_AOMC01000061 (original name was: NZ_AOMC01000061.1)
  NZ_AOMC01000062 (original name was: NZ_AOMC01000062.1)
  NZ_AOMC01000063 (original name was: NZ_AOMC01000063.1)
  NZ_AOMC01000065 (original name was: NZ_AOMC01000065.1)
  NZ_AOMC01000066 (original name was: NZ_AOMC01000066.1)
  NZ_AOMC01000067 (original name was: NZ_AOMC01000067.1)
  NZ_AOMC01000068 (original name was: NZ_AOMC01000068.1)
  NZ_AOMC01000069 (original name was: NZ_AOMC01000069.1)
  NZ_AOMC01000070 (original name was: NZ_AOMC01000070.1)
  NZ_AOMC01000071 (original name was: NZ_AOMC01000071.1)
  NZ_AOMC01000072 (original name was: NZ_AOMC01000072.1)
  NZ_AOMC01000074 (original name was: NZ_AOMC01000074.1)
  NZ_AOMC01000075 (original name was: NZ_AOMC01000075.1)
  NZ_AOMC01000076 (original name was: NZ_AOMC01000076.1)
  NZ_AOMC01000077 (original name was: NZ_AOMC01000077.1)
  NZ_AOMC01000079 (original name was: NZ_AOMC01000079.1)
  NZ_AOMC01000080 (original name was: NZ_AOMC01000080.1)
  NZ_AOMC01000081 (original name was: NZ_AOMC01000081.1)
  NZ_AOMC01000083 (original name was: NZ_AOMC01000083.1)
  NZ_AOMC01000084 (original name was: NZ_AOMC01000084.1)
  NZ_AOMC01000085 (original name was: NZ_AOMC01000085.1)
  NZ_AOMC01000086 (original name was: NZ_AOMC01000086.1)
  NZ_AOMC01000087 (original name was: NZ_AOMC01000087.1)
  NZ_AOMC01000091 (original name was: NZ_AOMC01000091.1)
  NZ_AOMC01000092 (original name was: NZ_AOMC01000092.1)
  NZ_AOMC01000093 (original name was: NZ_AOMC01000093.1)
  NZ_AOMC01000094 (original name was: NZ_AOMC01000094.1)
  NZ_AOMC01000095 (original name was: NZ_AOMC01000095.1)
  NZ_AOMC01000096 (original name was: NZ_AOMC01000096.1)
  NZ_AOMC01000097 (original name was: NZ_AOMC01000097.1)
  NZ_AOMC01000100 (original name was: NZ_AOMC01000100.1)
  NZ_AOMC01000101 (original name was: NZ_AOMC01000101.1)
  NZ_AOMC01000103 (original name was: NZ_AOMC01000103.1)
  NZ_AOMC01000104 (original name was: NZ_AOMC01000104.1)
  NZ_AOMC01000105 (original name was: NZ_AOMC01000105.1)
  NZ_AOMC01000106 (original name was: NZ_AOMC01000106.1)
  NZ_AOMC01000107 (original name was: NZ_AOMC01000107.1)
  NZ_AOMC01000108 (original name was: NZ_AOMC01000108.1)
  NZ_AOMC01000109 (original name was: NZ_AOMC01000109.1)
  NZ_AOMC01000111 (original name was: NZ_AOMC01000111.1)
  NZ_AOMC01000112 (original name was: NZ_AOMC01000112.1)
  NZ_AOMC01000113 (original name was: NZ_AOMC01000113.1)
  NZ_AOMC01000114 (original name was: NZ_AOMC01000114.1)
  NZ_AOMC01000115 (original name was: NZ_AOMC01000115.1)
  NZ_AOMC01000116 (original name was: NZ_AOMC01000116.1)
  NZ_AOMC01000118 (original name was: NZ_AOMC01000118.1)
  NZ_AOMC01000119 (original name was: NZ_AOMC01000119.1)
  NZ_AOMC01000120 (original name was: NZ_AOMC01000120.1)
  NZ_AOMC01000121 (original name was: NZ_AOMC01000121.1)
  NZ_AOMC01000122 (original name was: NZ_AOMC01000122.1)
  NZ_AOMC01000123 (original name was: NZ_AOMC01000123.1)
  NZ_AOMC01000124 (original name was: NZ_AOMC01000124.1)
  NZ_AOMC01000125 (original name was: NZ_AOMC01000125.1)
  NZ_AOMC01000126 (original name was: NZ_AOMC01000126.1)
  NZ_AOMC01000127 (original name was: NZ_AOMC01000127.1)
  NZ_AOMC01000128 (original name was: NZ_AOMC01000128.1)
  NZ_AOMC01000129 (original name was: NZ_AOMC01000129.1)
  NZ_AOMC01000130 (original name was: NZ_AOMC01000130.1)
  NZ_AOMC01000131 (original name was: NZ_AOMC01000131.1)
  NZ_AOMC01000132 (original name was: NZ_AOMC01000132.1)
  NZ_AOMC01000133 (original name was: NZ_AOMC01000133.1)
  NZ_AOMC01000134 (original name was: NZ_AOMC01000134.1)
  NZ_AOMC01000135 (original name was: NZ_AOMC01000135.1)
  NZ_AOMC01000136 (original name was: NZ_AOMC01000136.1)
  NZ_AOMC01000138 (original name was: NZ_AOMC01000138.1)
  NZ_AOMC01000140 (original name was: NZ_AOMC01000140.1)
  NZ_AOMC01000141 (original name was: NZ_AOMC01000141.1)
  NZ_AOMC01000142 (original name was: NZ_AOMC01000142.1)
  NZ_AOMC01000143 (original name was: NZ_AOMC01000143.1)
  NZ_AOMC01000145 (original name was: NZ_AOMC01000145.1)
  NZ_AOMC01000146 (original name was: NZ_AOMC01000146.1)
  NZ_AOMC01000147 (original name was: NZ_AOMC01000147.1)
  NZ_AOMC01000148 (original name was: NZ_AOMC01000148.1)
  NZ_AOMC01000149 (original name was: NZ_AOMC01000149.1)
  NZ_AOMC01000150 (original name was: NZ_AOMC01000150.1)
  NZ_AOMC01000151 (original name was: NZ_AOMC01000151.1)
  NZ_AOMC01000152 (original name was: NZ_AOMC01000152.1)
  NZ_AOMC01000153 (original name was: NZ_AOMC01000153.1)
  NZ_AOMC01000154 (original name was: NZ_AOMC01000154.1)
  NZ_AOMC01000155 (original name was: NZ_AOMC01000155.1)
  NZ_AOMC01000156 (original name was: NZ_AOMC01000156.1)
  NZ_AOMC01000157 (original name was: NZ_AOMC01000157.1)
  NZ_AOMC01000158 (original name was: NZ_AOMC01000158.1)
  NZ_AOMC01000160 (original name was: NZ_AOMC01000160.1)
  NZ_AOMC01000161 (original name was: NZ_AOMC01000161.1)
  NZ_AOMC01000162 (original name was: NZ_AOMC01000162.1)
  NZ_AOMC01000166 (original name was: NZ_AOMC01000166.1)
  NZ_AOMC01000167 (original name was: NZ_AOMC01000167.1)

Compact view
c00006_NZ_AOMC.. - Region 1 - terpene
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1,985 - 17,321 nt. (total: 15,337 nt) Show pHMM detection rules used
Region on contig edge.
terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | terpene | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000647.1 |  | 0.33 | Terpene | carotenoid | Rhodobacter sphaeroides
BGC0000645.1 |  | 0.21 | Terpene | carotenoid | Halobacillus halophilus DSM 2266
BGC0000648.1 |  | 0.20 | Terpene | carotenoid | Myxococcus xanthus
BGC0000650.1 |  | 0.19 | Terpene | carotenoid | Algoriphagus sp. KK10202C
BGC0000630.1 |  | 0.19 | Terpene | (2R,3S,3'S)-2-hydroxyastaxanthin | Paracoccus haeundaensis
BGC0000640.1 |  | 0.19 | Terpene | carotenoid | Enterobacteriaceae bacterium DC404
BGC0000656.1 |  | 0.19 | Terpene | zeaxanthin | Xanthobacter autotrophicus Py2
BGC0000644.1 |  | 0.18 | Terpene | carotenoid | Dietzia sp. CQ4
BGC0000637.1 |  | 0.18 | Terpene | carotenoid | Corynebacterium glutamicum
BGC0000635.1 |  | 0.17 | Terpene | carotenoid | Paracoccus sp. N81106

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000647.1 |  | 0.66 | Terpene | carotenoid | Rhodobacter sphaeroides
BGC0000645.1 |  | 0.53 | Terpene | carotenoid | Halobacillus halophilus DSM 2266
BGC0000648.1 |  | 0.52 | Terpene | carotenoid | Myxococcus xanthus
BGC0000650.1 |  | 0.52 | Terpene | carotenoid | Algoriphagus sp. KK10202C
BGC0000630.1 |  | 0.51 | Terpene | (2R,3S,3'S)-2-hydroxyastaxanthin | Paracoccus haeundaensis
BGC0000640.1 |  | 0.51 | Terpene | carotenoid | Enterobacteriaceae bacterium DC404
BGC0000656.1 |  | 0.50 | Terpene | zeaxanthin | Xanthobacter autotrophicus Py2
BGC0000644.1 |  | 0.49 | Terpene | carotenoid | Dietzia sp. CQ4
BGC0000637.1 |  | 0.49 | Terpene | carotenoid | Corynebacterium glutamicum
BGC0000635.1 |  | 0.49 | Terpene | carotenoid | Paracoccus sp. N81106

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
c00032_NZ_AOMC.. - Region 1 - terpene
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 14,698 - 35,747 nt. (total: 21,050 nt) Show pHMM detection rules used
terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
TTA codons
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | terpene | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000634.1 |  | 0.21 | Terpene | carotenoid | Brevundimonas sp. SD212
BGC0000643.1 |  | 0.21 | Terpene | carotenoid | Brevundimonas vesicularis
BGC0000640.1 |  | 0.19 | Terpene | carotenoid | Enterobacteriaceae bacterium DC404
BGC0000630.1 |  | 0.19 | Terpene | (2R,3S,3'S)-2-hydroxyastaxanthin | Paracoccus haeundaensis
BGC0000783.1 |  | 0.18 | Saccharide | O-antigen | Xanthomonas oryzae pv. oryzae
BGC0000664.1 |  | 0.17 | Terpene | isorenieratene | Streptomyces griseus subsp. griseus NBRC 13350
BGC0000646.1 |  | 0.17 | Terpene | β-carotein | uncultured bacterium
BGC0000554.1 |  | 0.16 | RiPP | SRO15-3108 | Streptomyces filamentosus NRRL 15998
BGC0000249.1 |  | 0.16 | Polyketide | nogalamycin | Streptomyces nogalater
BGC0000244.1 |  | 0.16 | Polyketide | macrotetrolide | Streptomyces griseus subsp. griseus

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000634.1 |  | 0.54 | Terpene | carotenoid | Brevundimonas sp. SD212
BGC0000643.1 |  | 0.54 | Terpene | carotenoid | Brevundimonas vesicularis
BGC0000640.1 |  | 0.52 | Terpene | carotenoid | Enterobacteriaceae bacterium DC404
BGC0000630.1 |  | 0.52 | Terpene | (2R,3S,3'S)-2-hydroxyastaxanthin | Paracoccus haeundaensis
BGC0000783.1 |  | 0.50 | Saccharide | O-antigen | Xanthomonas oryzae pv. oryzae
BGC0000664.1 |  | 0.48 | Terpene | isorenieratene | Streptomyces griseus subsp. griseus NBRC 13350
BGC0000646.1 |  | 0.48 | Terpene | β-carotein | uncultured bacterium
BGC0000554.1 |  | 0.47 | RiPP | SRO15-3108 | Streptomyces filamentosus NRRL 15998
BGC0000249.1 |  | 0.47 | Polyketide | nogalamycin | Streptomyces nogalater
BGC0000244.1 |  | 0.46 | Polyketide | macrotetrolide | Streptomyces griseus subsp. griseus

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names