GCF_002442935.1_ASM244293v1_genomic - 5 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_CP017466.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	terpene	203,993	224,656
Region 1.2	T3PKS	552,468	593,640	capsular polysaccharide	Saccharide:Exopolysaccharide	3%
Region 1.3	siderophore	938,701	953,680	staphyloferrin A	Other:Non-NRP siderophore	100%
Region 1.4	cyclic-lactone-autoinducer	1,097,829	1,118,538	kijanimicin	Polyketide	4%
Region 1.5	terpene	1,378,890	1,399,711

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	terpene	203,993	224,656
Region 1.2	T3PKS	552,468	593,640	capsular polysaccharide	Saccharide:Exopolysaccharide	3%
Region 1.3	siderophore	938,701	953,680	staphyloferrin A	Other:Non-NRP siderophore	100%
Region 1.4	cyclic-lactone-autoinducer	1,097,829	1,118,538	kijanimicin	Polyketide	4%
Region 1.5	terpene	1,378,890	1,399,711

No secondary metabolite regions were found in these records:: NZ_CP017467.1; NZ_CP017468.1

Compact view

NZ_CP017466.1 - Region 1 - terpene

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Location: 203,993 - 224,656 nt. (total: 20,664 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.31	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000648.1	0.23	Terpene	carotenoid	Myxococcus xanthus
BGC0000645.1	0.23	Terpene	carotenoid	Halobacillus halophilus DSM 2266
BGC0000636.1	0.22	Terpene	carotenoid	Brevibacterium linens
BGC0001456.1	0.21	Terpene	isorenieratene	Streptomyces argillaceus
BGC0001227.1	0.20	Terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0000633.1	0.20	Terpene	carotenoid	Streptomyces avermitilis
BGC0000664.1	0.20	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000646.1	0.19	Terpene	β-carotein	uncultured bacterium
BGC0000656.1	0.18	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.65	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000648.1	0.56	Terpene	carotenoid	Myxococcus xanthus
BGC0000645.1	0.56	Terpene	carotenoid	Halobacillus halophilus DSM 2266
BGC0000636.1	0.56	Terpene	carotenoid	Brevibacterium linens
BGC0001456.1	0.53	Terpene	isorenieratene	Streptomyces argillaceus
BGC0001227.1	0.53	Terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0000633.1	0.52	Terpene	carotenoid	Streptomyces avermitilis
BGC0000664.1	0.52	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000646.1	0.52	Terpene	β-carotein	uncultured bacterium
BGC0000656.1	0.50	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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NZ_CP017466.1 - Region 2 - T3PKS

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Location: 552,468 - 593,640 nt. (total: 41,173 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000286.1	0.22	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0000255.1	0.17	Polyketide	pederin	Uncultured bacterium
BGC0000867.1	0.17	Other	polyhydroxyalkanoic acids	Ectothiorhodospira shaposhnikovii
BGC0000866.1	0.17	Other	polyhydroxyalkanoate	Burkholderia sp. DSM 9242
BGC0001104.1	0.16	NRP, Polyketide	myxovirescin A1	Myxococcus xanthus DK 1622
BGC0000679.1	0.16	Terpene	diazepinomicin	Micromonospora sp. M42
BGC0001739.1	0.16	Other	phosphonoacetic Acid	Streptomyces sp. NRRL F-525
BGC0000934.1	0.16	Other (Phenazine)	5-acetyl-5,10-dihydrophenazine-1-carboxylic acid, 5-(2-hydroxyacetyl)-5,10-dihydrophenazine-1-carboxylic acid, endophenazine A1, endophenazine F, endophenazine G	Kitasatospora sp. HKI 714
BGC0000205.1	0.16	Polyketide	bryostatin	Candidatus Endobugula sertula
BGC0001538.1	0.15	NRP, Polyketide	caboxamycin	Streptomyces sp. NTK 937

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000286.1	0.55	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0000255.1	0.48	Polyketide	pederin	Uncultured bacterium
BGC0000867.1	0.48	Other	polyhydroxyalkanoic acids	Ectothiorhodospira shaposhnikovii
BGC0000866.1	0.48	Other	polyhydroxyalkanoate	Burkholderia sp. DSM 9242
BGC0001104.1	0.47	NRP, Polyketide	myxovirescin A1	Myxococcus xanthus DK 1622
BGC0000679.1	0.47	Terpene	diazepinomicin	Micromonospora sp. M42
BGC0001739.1	0.47	Other	phosphonoacetic Acid	Streptomyces sp. NRRL F-525
BGC0000934.1	0.47	Other (Phenazine)	5-acetyl-5,10-dihydrophenazine-1-carboxylic acid, 5-(2-hydroxyacetyl)-5,10-dihydrophenazine-1-carboxylic acid, endophenazine A1, endophenazine F, endophenazine G	Kitasatospora sp. HKI 714
BGC0000205.1	0.46	Polyketide	bryostatin	Candidatus Endobugula sertula
BGC0001538.1	0.45	NRP, Polyketide	caboxamycin	Streptomyces sp. NTK 937

Similar known gene clusters

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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NZ_CP017466.1 - Region 3 - siderophore

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Location: 938,701 - 953,680 nt. (total: 14,980 nt) Show pHMM detection rules used

siderophore: IucA_IucC

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000944.1	0.53	Other (Non-NRP siderophore)	staphyloferrin A	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0000939.1	0.31	Other	aerobactin	Grimontia hollisae
BGC0001870.1	0.22	Other	putrebactin, avaroferrin	Xenorhabdus budapestensis
BGC0000947.1	0.19	Other	vibrioferrin	Vibrio alginolyticus
BGC0000883.1	0.17	Other	arginomycin	Streptomyces arginensis
BGC0000943.1	0.15	Other	staphylobactin	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0001767.1	0.09	NRP	salinichelins	Salinispora pacifica CNY331
BGC0000423.1	0.09	NRP	scabichelin	Streptomyces scabiei 87.22
BGC0001738.1	0.09	NRP, Polyketide	phomasetin	Pyrenochaetopsis sp.
BGC0000708.1	0.09	Saccharide	lividomycin	Streptomyces lividus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000944.1	0.81	Other (Non-NRP siderophore)	staphyloferrin A	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0000939.1	0.64	Other	aerobactin	Grimontia hollisae
BGC0001870.1	0.55	Other	putrebactin, avaroferrin	Xenorhabdus budapestensis
BGC0000947.1	0.51	Other	vibrioferrin	Vibrio alginolyticus
BGC0000883.1	0.47	Other	arginomycin	Streptomyces arginensis
BGC0000943.1	0.44	Other	staphylobactin	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0001767.1	0.34	NRP	salinichelins	Salinispora pacifica CNY331
BGC0000423.1	0.33	NRP	scabichelin	Streptomyces scabiei 87.22
BGC0001738.1	0.33	NRP, Polyketide	phomasetin	Pyrenochaetopsis sp.
BGC0000708.1	0.32	Saccharide	lividomycin	Streptomyces lividus

Similar known gene clusters

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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NZ_CP017466.1 - Region 4 - cyclic-lactone-autoinducer

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Location: 1,097,829 - 1,118,538 nt. (total: 20,710 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001687.1	0.14	Other	N-tetradecanoyl tyrosine	uncultured bacterium CSL12
BGC0000624.1	0.09	RiPP	salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide	Lactobacillus salivarius
BGC0000433.1	0.08	NRP	surfactin	Bacillus velezensis FZB42
BGC0001053.1	0.08	NRP, Polyketide	tubulysin A	Archangium disciforme
BGC0001836.1	0.08	Polyketide	tartrolon D, tartrolon F, tartrolon G	Gynuella sunshinyii YC6258
BGC0001130.1	0.07	NRP, Polyketide	fabclavine Ia	Xenorhabdus budapestensis
BGC0001056.1	0.06	NRP, Polyketide	zeamine, zeamine I, zeamine II, prezeamine, prezeamine I	Serratia plymuthica RVH1
BGC0000082.1	0.06	Polyketide	kijanimicin	Actinomadura kijaniata
BGC0001700.1	0.05	Polyketide	niphimycins C-E	Streptomyces sp. IMB7-145
BGC0000163.1	0.04	Polyketide	tetronasin	Streptomyces longisporoflavus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001687.1	0.44	Other	N-tetradecanoyl tyrosine	uncultured bacterium CSL12
BGC0000624.1	0.33	RiPP	salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide	Lactobacillus salivarius
BGC0000433.1	0.32	NRP	surfactin	Bacillus velezensis FZB42
BGC0001053.1	0.31	NRP, Polyketide	tubulysin A	Archangium disciforme
BGC0001836.1	0.30	Polyketide	tartrolon D, tartrolon F, tartrolon G	Gynuella sunshinyii YC6258
BGC0001130.1	0.29	NRP, Polyketide	fabclavine Ia	Xenorhabdus budapestensis
BGC0001056.1	0.26	NRP, Polyketide	zeamine, zeamine I, zeamine II, prezeamine, prezeamine I	Serratia plymuthica RVH1
BGC0000082.1	0.25	Polyketide	kijanimicin	Actinomadura kijaniata
BGC0001700.1	0.23	Polyketide	niphimycins C-E	Streptomyces sp. IMB7-145
BGC0000163.1	0.18	Polyketide	tetronasin	Streptomyces longisporoflavus

Similar known gene clusters

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP017466.1 - Region 5 - terpene

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Location: 1,378,890 - 1,399,711 nt. (total: 20,822 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	terpene	Similarity score	Type	Compound(s)	Organism
BGC0001005.1		0.04	NRP, Polyketide	locillomycin	Bacillus subtilis

Reference	Aggregated	Similarity score	Type	Compound(s)	Organism
BGC0001005.1		0.18	NRP, Polyketide	locillomycin	Bacillus subtilis

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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