GCF_002797685.1_ASM279768v1_genomic - 4 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_PGFH01000001 (original name was: NZ_PGFH01000001.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	T3PKS	170,110	211,165	alkylresorcinol	Polyketide	100%
Region 1.2	terpene	376,707	397,573	carotenoid	Terpene	33%
Region 1.3	betalactone	1,777,106	1,804,354	microansamycin	Polyketide	7%

NZ_PGFH01000003 (original name was: NZ_PGFH01000003.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RiPP-like	68,812	79,099

No secondary metabolite regions were found in these records:: NZ_PGFH01000002 (original name was: NZ_PGFH01000002.1); NZ_PGFH01000004 (original name was: NZ_PGFH01000004.1)

Compact view

c00001_NZ_PGFH.. - Region 1 - T3PKS

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Location: 170,110 - 211,165 nt. (total: 41,056 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

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NRPS/PKS domains

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Pfam domains

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000282.1	0.52	Polyketide	alkylresorcinol	Streptomyces griseus subsp. griseus NBRC 13350
BGC0002034.1	0.28	Other	perquinoline A, perquinoline B, perquinoline C	Streptomyces sp. IB2014 016-6
BGC0001184.1	0.27	Other	bacilysin	Bacillus velezensis FZB42
BGC0000888.1	0.27	Other	bacilysin	Bacillus sp. CS93
BGC0001927.1	0.20	Other	A-94964	Streptomyces sp.
BGC0001197.1	0.20	Polyketide	frankiamicin	Frankia sp. EAN1pec
BGC0000204.1	0.20	Polyketide	benastatin A, benastatin B, BE-43767, TAN1532B	Streptomyces sp. A2991200
BGC0002016.1	0.18	Polyketide	lugdunomycin	Streptomyces sp. QL37
BGC0000495.1	0.18	RiPP	actagardine	Actinoplanes garbadinensis
BGC0001177.1	0.18	Polyketide	mensacaricin	Streptomyces bottropensis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000282.1	0.80	Polyketide	alkylresorcinol	Streptomyces griseus subsp. griseus NBRC 13350
BGC0002034.1	0.61	Other	perquinoline A, perquinoline B, perquinoline C	Streptomyces sp. IB2014 016-6
BGC0001184.1	0.60	Other	bacilysin	Bacillus velezensis FZB42
BGC0000888.1	0.60	Other	bacilysin	Bacillus sp. CS93
BGC0001927.1	0.53	Other	A-94964	Streptomyces sp.
BGC0001197.1	0.52	Polyketide	frankiamicin	Frankia sp. EAN1pec
BGC0000204.1	0.52	Polyketide	benastatin A, benastatin B, BE-43767, TAN1532B	Streptomyces sp. A2991200
BGC0002016.1	0.50	Polyketide	lugdunomycin	Streptomyces sp. QL37
BGC0000495.1	0.50	RiPP	actagardine	Actinoplanes garbadinensis
BGC0001177.1	0.50	Polyketide	mensacaricin	Streptomyces bottropensis

Similar known gene clusters

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c00001_NZ_PGFH.. - Region 2 - terpene

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Location: 376,707 - 397,573 nt. (total: 20,867 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

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MIBiG comparison

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Pfam domains

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000648.1	0.32	Terpene	carotenoid	Myxococcus xanthus
BGC0000644.1	0.31	Terpene	carotenoid	Dietzia sp. CQ4
BGC0000637.1	0.29	Terpene	carotenoid	Corynebacterium glutamicum
BGC0000650.1	0.28	Terpene	carotenoid	Algoriphagus sp. KK10202C
BGC0000645.1	0.23	Terpene	carotenoid	Halobacillus halophilus DSM 2266
BGC0001227.1	0.21	Terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0000633.1	0.20	Terpene	carotenoid	Streptomyces avermitilis
BGC0001456.1	0.19	Terpene	isorenieratene	Streptomyces argillaceus
BGC0001903.1	0.19	Other	neocarazostatin A	Streptomyces sp. MA37
BGC0001526.1	0.16	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000648.1	0.65	Terpene	carotenoid	Myxococcus xanthus
BGC0000644.1	0.64	Terpene	carotenoid	Dietzia sp. CQ4
BGC0000637.1	0.63	Terpene	carotenoid	Corynebacterium glutamicum
BGC0000650.1	0.62	Terpene	carotenoid	Algoriphagus sp. KK10202C
BGC0000645.1	0.56	Terpene	carotenoid	Halobacillus halophilus DSM 2266
BGC0001227.1	0.53	Terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0000633.1	0.53	Terpene	carotenoid	Streptomyces avermitilis
BGC0001456.1	0.51	Terpene	isorenieratene	Streptomyces argillaceus
BGC0001903.1	0.50	Other	neocarazostatin A	Streptomyces sp. MA37
BGC0001526.1	0.47	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099

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c00001_NZ_PGFH.. - Region 3 - betalactone

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Location: 1,777,106 - 1,804,354 nt. (total: 27,249 nt) Show pHMM detection rules used

betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000649.1	0.22	Terpene	carotenoid	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001935.1	0.19	Other	3,7-dihydroxytropolone	Streptomyces cyaneofuscatus
BGC0001487.1	0.19	Other	3,7-dihydroxytropolone	Streptomyces cyaneofuscatus
BGC0000698.1	0.18	Saccharide	hygromycin A	Streptomyces hygroscopicus
BGC0001483.1	0.17	Other	5-isoprenylindole-3-carboxylate β-D-glycosyl ester	Streptomyces sp. RM-5-8
BGC0001910.1	0.17	Terpene	cyslabdan	Streptomyces cyslabdanicus
BGC0001911.1	0.17	Terpene	raimonol	Streptomyces anulatus
BGC0000286.1	0.17	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0002009.1	0.17	Polyketide	kanglemycin A, kanglemycin V1, kanglemycin V2	Amycolatopsis vancoresmycina
BGC0000936.1	0.17	Other	pyocyanine	Pseudomonas aeruginosa PAO1

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000649.1	0.55	Terpene	carotenoid	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001935.1	0.51	Other	3,7-dihydroxytropolone	Streptomyces cyaneofuscatus
BGC0001487.1	0.51	Other	3,7-dihydroxytropolone	Streptomyces cyaneofuscatus
BGC0000698.1	0.49	Saccharide	hygromycin A	Streptomyces hygroscopicus
BGC0001483.1	0.49	Other	5-isoprenylindole-3-carboxylate β-D-glycosyl ester	Streptomyces sp. RM-5-8
BGC0001910.1	0.48	Terpene	cyslabdan	Streptomyces cyslabdanicus
BGC0001911.1	0.48	Terpene	raimonol	Streptomyces anulatus
BGC0000286.1	0.48	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0002009.1	0.48	Polyketide	kanglemycin A, kanglemycin V1, kanglemycin V2	Amycolatopsis vancoresmycina
BGC0000936.1	0.48	Other	pyocyanine	Pseudomonas aeruginosa PAO1

Similar known gene clusters

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Detailed TIGRFAM domain annotation

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c00003_NZ_PGFH.. - Region 1 - RiPP-like

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Location: 68,812 - 79,099 nt. (total: 10,288 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001551.1	0.16	RiPP	citrulassin E	Streptomyces glaucescens
BGC0000504.1	0.16	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000548.1	0.16	RiPP	salivaricin A	Streptococcus salivarius
BGC0000500.1	0.15	RiPP	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum
BGC0001120.1	0.14	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000792.1	0.14	Saccharide	polysaccharide	Enterococcus faecalis OG1RF
BGC0002009.1	0.14	Polyketide	kanglemycin A, kanglemycin V1, kanglemycin V2	Amycolatopsis vancoresmycina
BGC0000703.1	0.14	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0000784.1	0.14	Saccharide	O-antigen	Pseudomonas aeruginosa

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001551.1	0.47	RiPP	citrulassin E	Streptomyces glaucescens
BGC0000504.1	0.47	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000554.1	0.46	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000548.1	0.46	RiPP	salivaricin A	Streptococcus salivarius
BGC0000500.1	0.45	RiPP	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum
BGC0001120.1	0.44	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000792.1	0.44	Saccharide	polysaccharide	Enterococcus faecalis OG1RF
BGC0002009.1	0.44	Polyketide	kanglemycin A, kanglemycin V1, kanglemycin V2	Amycolatopsis vancoresmycina
BGC0000703.1	0.43	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0000784.1	0.43	Saccharide	O-antigen	Pseudomonas aeruginosa

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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