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Overview
2.1
2.2
2.3

### Identified secondary metabolite regions using strictness 'relaxed'

NZ_UFUW01000001 (original name was: NZ_UFUW01000001.1)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 2.1 | arylpolyene | 16,567 | 49,847 | APE Ec | Other | 10%
Region 2.2 | T3PKS | 2,515,930 | 2,557,084 | napyradiomycin A80915C | Terpene + Polyketide:Type III | 6%
Region 2.3 | arylpolyene | 2,596,573 | 2,637,766 |

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 2.1 | arylpolyene | 16,567 | 49,847 | APE Ec | Other | 10%
Region 2.2 | T3PKS | 2,515,930 | 2,557,084 | napyradiomycin A80915C | Terpene + Polyketide:Type III | 6%
Region 2.3 | arylpolyene | 2,596,573 | 2,637,766 |

No secondary metabolite regions were found in these records:
  NZ_UFUW01000002 (original name was: NZ_UFUW01000002.1)

Compact view
c00002_NZ_UFUW.. - Region 1 - arylpolyene
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 16,567 - 49,847 nt. (total: 33,281 nt) Show pHMM detection rules used
arylpolyene: (APE_KS1 or APE_KS2)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | arylpolyene | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0001862.1 |  | 0.21 | RiPP | geocillicin | Aeribacillus pallidus
BGC0001930.1 |  | 0.21 | RiPP | pallidocin | Aeribacillus pallidus
BGC0001723.1 |  | 0.19 | Polyketide | oviedomycin | Streptomyces antibioticus
BGC0002008.1 |  | 0.19 | Other | aryl polyenes | Xenorhabdus doucetiae
BGC0001223.1 |  | 0.19 | Other | hydroxysporine | uncultured bacterium
BGC0000836.1 |  | 0.19 | Other | APE Ec | Escherichia coli CFT073
BGC0001485.1 |  | 0.18 | Other | 3-demethylchuangxinmycin | Actinoplanes tsinanensis
BGC0001546.1 |  | 0.18 | Alkaloid | chuangxinmycin | Actinoplanes tsinanensis
BGC0000234.1 |  | 0.17 | Polyketide | jadomycin | Streptomyces venezuelae ATCC 10712
BGC0000228.1 |  | 0.17 | Polyketide | granaticin | Streptomyces violaceoruber

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0001862.1 |  | 0.54 | RiPP | geocillicin | Aeribacillus pallidus
BGC0001930.1 |  | 0.54 | RiPP | pallidocin | Aeribacillus pallidus
BGC0001723.1 |  | 0.51 | Polyketide | oviedomycin | Streptomyces antibioticus
BGC0002008.1 |  | 0.51 | Other | aryl polyenes | Xenorhabdus doucetiae
BGC0001223.1 |  | 0.51 | Other | hydroxysporine | uncultured bacterium
BGC0000836.1 |  | 0.51 | Other | APE Ec | Escherichia coli CFT073
BGC0001485.1 |  | 0.49 | Other | 3-demethylchuangxinmycin | Actinoplanes tsinanensis
BGC0001546.1 |  | 0.49 | Alkaloid | chuangxinmycin | Actinoplanes tsinanensis
BGC0000234.1 |  | 0.49 | Polyketide | jadomycin | Streptomyces venezuelae ATCC 10712
BGC0000228.1 |  | 0.49 | Polyketide | granaticin | Streptomyces violaceoruber

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
c00002_NZ_UFUW.. - Region 2 - T3PKS
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 2,515,930 - 2,557,084 nt. (total: 41,155 nt) Show pHMM detection rules used
T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | T3PKS | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000784.1 |  | 0.21 | Saccharide | O-antigen | Pseudomonas aeruginosa
BGC0001120.1 |  | 0.18 | NRP, Polyketide | burkholderic acid | Burkholderia thailandensis E264
BGC0001551.1 |  | 0.17 | RiPP | citrulassin E | Streptomyces glaucescens
BGC0000487.1 |  | 0.17 | RiPP | carnocyclin | Carnobacterium maltaromaticum
BGC0001526.1 |  | 0.17 | Other | bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K | Synechocystis salina LEGE 06099
BGC0000554.1 |  | 0.16 | RiPP | SRO15-3108 | Streptomyces filamentosus NRRL 15998
BGC0000626.1 |  | 0.16 | RiPP | thuricin | Bacillus thuringiensis
BGC0000513.1 |  | 0.16 | RiPP | Ery-9, Ery-6, Ery-8, Ery-7, Ery-5, Ery-4, Ery-3 | Saccharopolyspora erythraea NRRL 2338
BGC0000504.1 |  | 0.16 | RiPP | cytolysin ClyLl, cytolysin ClyLs | Plasmid pAD1
BGC0001210.1 |  | 0.16 | RiPP | pseudomycoicidin | Bacillus pseudomycoides DSM 12442

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000784.1 |  | 0.53 | Saccharide | O-antigen | Pseudomonas aeruginosa
BGC0001120.1 |  | 0.49 | NRP, Polyketide | burkholderic acid | Burkholderia thailandensis E264
BGC0001551.1 |  | 0.48 | RiPP | citrulassin E | Streptomyces glaucescens
BGC0000487.1 |  | 0.48 | RiPP | carnocyclin | Carnobacterium maltaromaticum
BGC0001526.1 |  | 0.48 | Other | bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K | Synechocystis salina LEGE 06099
BGC0000554.1 |  | 0.47 | RiPP | SRO15-3108 | Streptomyces filamentosus NRRL 15998
BGC0000626.1 |  | 0.47 | RiPP | thuricin | Bacillus thuringiensis
BGC0000513.1 |  | 0.47 | RiPP | Ery-9, Ery-6, Ery-8, Ery-7, Ery-5, Ery-4, Ery-3 | Saccharopolyspora erythraea NRRL 2338
BGC0000504.1 |  | 0.47 | RiPP | cytolysin ClyLl, cytolysin ClyLs | Plasmid pAD1
BGC0001210.1 |  | 0.47 | RiPP | pseudomycoicidin | Bacillus pseudomycoides DSM 12442

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
c00002_NZ_UFUW.. - Region 3 - arylpolyene
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 2,596,573 - 2,637,766 nt. (total: 41,194 nt) Show pHMM detection rules used
arylpolyene: (APE_KS1 or APE_KS2)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | arylpolyene | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000929.1 |  | 0.18 | Other | xanthothricin | Burkholderia glumae
BGC0000836.1 |  | 0.18 | Other | APE Ec | Escherichia coli CFT073
BGC0002008.1 |  | 0.18 | Other | aryl polyenes | Xenorhabdus doucetiae
BGC0000527.1 |  | 0.18 | RiPP | mersacidin | Bacillus sp. HIL-Y85/54728
BGC0001973.1 |  | 0.17 | Other | fervenulin | Streptomyces hiroshimensis
BGC0001972.1 |  | 0.17 | Other | toxoflavin, fervenulin | Streptomyces hiroshimensis
BGC0001959.1 |  | 0.17 | Other | taylorflavin A, taylorflavin B | Streptomyces hiroshimensis
BGC0000530.1 |  | 0.15 | RiPP | mutacin B-Ny266 | Streptococcus mutans N66
BGC0000533.1 |  | 0.15 | RiPP | mutacin III | Streptococcus mutans
BGC0000531.1 |  | 0.15 | RiPP | mutacin I | Streptococcus mutans

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000929.1 |  | 0.50 | Other | xanthothricin | Burkholderia glumae
BGC0000836.1 |  | 0.49 | Other | APE Ec | Escherichia coli CFT073
BGC0002008.1 |  | 0.49 | Other | aryl polyenes | Xenorhabdus doucetiae
BGC0000527.1 |  | 0.49 | RiPP | mersacidin | Bacillus sp. HIL-Y85/54728
BGC0001973.1 |  | 0.48 | Other | fervenulin | Streptomyces hiroshimensis
BGC0001972.1 |  | 0.48 | Other | toxoflavin, fervenulin | Streptomyces hiroshimensis
BGC0001959.1 |  | 0.48 | Other | taylorflavin A, taylorflavin B | Streptomyces hiroshimensis
BGC0000530.1 |  | 0.46 | RiPP | mutacin B-Ny266 | Streptococcus mutans N66
BGC0000533.1 |  | 0.46 | RiPP | mutacin III | Streptococcus mutans
BGC0000531.1 |  | 0.45 | RiPP | mutacin I | Streptococcus mutans

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names