Select genomic region:
Overview
1.1
4.1
5.1
7.1
12.1
23.1

### Identified secondary metabolite regions using strictness 'relaxed'

NZ_QEKH01000001 (original name was: NZ_QEKH01000001.1)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 1.1 | arylpolyene | 71,228 | 112,457 |

NZ_QEKH01000004 (original name was: NZ_QEKH01000004.1)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 4.1 | RRE-containing | 127,358 | 147,633 |

NZ_QEKH01000005 (original name was: NZ_QEKH01000005.1)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 5.1 | RRE-containing | 162,659 | 182,916 |

NZ_QEKH01000007 (original name was: NZ_QEKH01000007.1)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 7.1 | proteusin,RiPP-like | 39,510 | 64,478 |

NZ_QEKH01000012 (original name was: NZ_QEKH01000012.1)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 12.1 | arylpolyene | 34,038 | 91,363 |

NZ_QEKH01000023 (original name was: NZ_QEKH01000023.1)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 23.1 | RRE-containing | 1 | 16,393 |

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 1.1 | arylpolyene | 71,228 | 112,457 |
Region 4.1 | RRE-containing | 127,358 | 147,633 |
Region 5.1 | RRE-containing | 162,659 | 182,916 |
Region 7.1 | proteusin,RiPP-like | 39,510 | 64,478 |
Region 12.1 | arylpolyene | 34,038 | 91,363 |
Region 23.1 | RRE-containing | 1 | 16,393 |

No secondary metabolite regions were found in these records:
  NZ_QEKH01000002 (original name was: NZ_QEKH01000002.1)
  NZ_QEKH01000003 (original name was: NZ_QEKH01000003.1)
  NZ_QEKH01000006 (original name was: NZ_QEKH01000006.1)
  NZ_QEKH01000008 (original name was: NZ_QEKH01000008.1)
  NZ_QEKH01000009 (original name was: NZ_QEKH01000009.1)
  NZ_QEKH01000010 (original name was: NZ_QEKH01000010.1)
  NZ_QEKH01000011 (original name was: NZ_QEKH01000011.1)
  NZ_QEKH01000013 (original name was: NZ_QEKH01000013.1)
  NZ_QEKH01000014 (original name was: NZ_QEKH01000014.1)
  NZ_QEKH01000015 (original name was: NZ_QEKH01000015.1)
  NZ_QEKH01000016 (original name was: NZ_QEKH01000016.1)
  NZ_QEKH01000017 (original name was: NZ_QEKH01000017.1)
  NZ_QEKH01000018 (original name was: NZ_QEKH01000018.1)
  NZ_QEKH01000019 (original name was: NZ_QEKH01000019.1)
  NZ_QEKH01000020 (original name was: NZ_QEKH01000020.1)
  NZ_QEKH01000021 (original name was: NZ_QEKH01000021.1)
  NZ_QEKH01000022 (original name was: NZ_QEKH01000022.1)
  NZ_QEKH01000024 (original name was: NZ_QEKH01000024.1)
  NZ_QEKH01000025 (original name was: NZ_QEKH01000025.1)
  NZ_QEKH01000026 (original name was: NZ_QEKH01000026.1)
  NZ_QEKH01000027 (original name was: NZ_QEKH01000027.1)
  NZ_QEKH01000028 (original name was: NZ_QEKH01000028.1)
  NZ_QEKH01000029 (original name was: NZ_QEKH01000029.1)
  NZ_QEKH01000030 (original name was: NZ_QEKH01000030.1)
  NZ_QEKH01000031 (original name was: NZ_QEKH01000031.1)
  NZ_QEKH01000032 (original name was: NZ_QEKH01000032.1)
  NZ_QEKH01000033 (original name was: NZ_QEKH01000033.1)
  NZ_QEKH01000034 (original name was: NZ_QEKH01000034.1)
  NZ_QEKH01000035 (original name was: NZ_QEKH01000035.1)
  NZ_QEKH01000036 (original name was: NZ_QEKH01000036.1)
  NZ_QEKH01000037 (original name was: NZ_QEKH01000037.1)
  NZ_QEKH01000038 (original name was: NZ_QEKH01000038.1)
  NZ_QEKH01000039 (original name was: NZ_QEKH01000039.1)
  NZ_QEKH01000040 (original name was: NZ_QEKH01000040.1)
  NZ_QEKH01000041 (original name was: NZ_QEKH01000041.1)
  NZ_QEKH01000042 (original name was: NZ_QEKH01000042.1)
  NZ_QEKH01000043 (original name was: NZ_QEKH01000043.1)
  NZ_QEKH01000044 (original name was: NZ_QEKH01000044.1)
  NZ_QEKH01000045 (original name was: NZ_QEKH01000045.1)
  NZ_QEKH01000046 (original name was: NZ_QEKH01000046.1)
  NZ_QEKH01000047 (original name was: NZ_QEKH01000047.1)
  NZ_QEKH01000048 (original name was: NZ_QEKH01000048.1)
  NZ_QEKH01000049 (original name was: NZ_QEKH01000049.1)
  NZ_QEKH01000050 (original name was: NZ_QEKH01000050.1)
  NZ_QEKH01000051 (original name was: NZ_QEKH01000051.1)
  NZ_QEKH01000052 (original name was: NZ_QEKH01000052.1)
  NZ_QEKH01000053 (original name was: NZ_QEKH01000053.1)
  NZ_QEKH01000054 (original name was: NZ_QEKH01000054.1)
  NZ_QEKH01000055 (original name was: NZ_QEKH01000055.1)
  NZ_QEKH01000056 (original name was: NZ_QEKH01000056.1)
  NZ_QEKH01000057 (original name was: NZ_QEKH01000057.1)
  NZ_QEKH01000058 (original name was: NZ_QEKH01000058.1)
  NZ_QEKH01000059 (original name was: NZ_QEKH01000059.1)
  NZ_QEKH01000060 (original name was: NZ_QEKH01000060.1)
  NZ_QEKH01000061 (original name was: NZ_QEKH01000061.1)
  NZ_QEKH01000062 (original name was: NZ_QEKH01000062.1)
  NZ_QEKH01000063 (original name was: NZ_QEKH01000063.1)
  NZ_QEKH01000064 (original name was: NZ_QEKH01000064.1)
  NZ_QEKH01000065 (original name was: NZ_QEKH01000065.1)
  NZ_QEKH01000066 (original name was: NZ_QEKH01000066.1)
  NZ_QEKH01000067 (original name was: NZ_QEKH01000067.1)
  NZ_QEKH01000068 (original name was: NZ_QEKH01000068.1)
  NZ_QEKH01000069 (original name was: NZ_QEKH01000069.1)
  NZ_QEKH01000070 (original name was: NZ_QEKH01000070.1)
  NZ_QEKH01000071 (original name was: NZ_QEKH01000071.1)
  NZ_QEKH01000072 (original name was: NZ_QEKH01000072.1)
  NZ_QEKH01000073 (original name was: NZ_QEKH01000073.1)
  NZ_QEKH01000074 (original name was: NZ_QEKH01000074.1)
  NZ_QEKH01000075 (original name was: NZ_QEKH01000075.1)
  NZ_QEKH01000076 (original name was: NZ_QEKH01000076.1)
  NZ_QEKH01000077 (original name was: NZ_QEKH01000077.1)
  NZ_QEKH01000078 (original name was: NZ_QEKH01000078.1)
  NZ_QEKH01000079 (original name was: NZ_QEKH01000079.1)
  NZ_QEKH01000080 (original name was: NZ_QEKH01000080.1)
  NZ_QEKH01000081 (original name was: NZ_QEKH01000081.1)
  NZ_QEKH01000082 (original name was: NZ_QEKH01000082.1)
  NZ_QEKH01000083 (original name was: NZ_QEKH01000083.1)
  NZ_QEKH01000084 (original name was: NZ_QEKH01000084.1)
  NZ_QEKH01000085 (original name was: NZ_QEKH01000085.1)
  NZ_QEKH01000086 (original name was: NZ_QEKH01000086.1)
  NZ_QEKH01000087 (original name was: NZ_QEKH01000087.1)

Compact view
c00001_NZ_QEKH.. - Region 1 - arylpolyene
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 71,228 - 112,457 nt. (total: 41,230 nt) Show pHMM detection rules used
arylpolyene: (APE_KS1 or APE_KS2)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | arylpolyene | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0001909.1 |  | 0.16 | Polyketide | strobilurin | Strobilurus tenacellus
BGC0000703.1 |  | 0.16 | Saccharide | kanamycin | Streptomyces kanamyceticus
BGC0000504.1 |  | 0.15 | RiPP | cytolysin ClyLl, cytolysin ClyLs | Plasmid pAD1
BGC0001917.1 |  | 0.15 | Polyketide | 5-alkyl-1,2,3,4-tetrahydroquinolines, streptoaminals | Streptomyces nigrescens
BGC0001483.1 |  | 0.15 | Other | 5-isoprenylindole-3-carboxylate β-D-glycosyl ester | Streptomyces sp. RM-5-8
BGC0000243.1 |  | 0.15 | Polyketide | macrotetrolide | Streptomyces griseus subsp. griseus
BGC0000698.1 |  | 0.15 | Saccharide | hygromycin A | Streptomyces hygroscopicus
BGC0001219.1 |  | 0.14 | Polyketide | shanorellin | Chaetomium globosum CBS 148.51
BGC0001810.1 |  | 0.14 | Polyketide | trehangelin | Polymorphospora rubra
BGC0001120.1 |  | 0.14 | NRP, Polyketide | burkholderic acid | Burkholderia thailandensis E264

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0001909.1 |  | 0.47 | Polyketide | strobilurin | Strobilurus tenacellus
BGC0000703.1 |  | 0.47 | Saccharide | kanamycin | Streptomyces kanamyceticus
BGC0000504.1 |  | 0.46 | RiPP | cytolysin ClyLl, cytolysin ClyLs | Plasmid pAD1
BGC0001917.1 |  | 0.45 | Polyketide | 5-alkyl-1,2,3,4-tetrahydroquinolines, streptoaminals | Streptomyces nigrescens
BGC0001483.1 |  | 0.45 | Other | 5-isoprenylindole-3-carboxylate β-D-glycosyl ester | Streptomyces sp. RM-5-8
BGC0000243.1 |  | 0.45 | Polyketide | macrotetrolide | Streptomyces griseus subsp. griseus
BGC0000698.1 |  | 0.45 | Saccharide | hygromycin A | Streptomyces hygroscopicus
BGC0001219.1 |  | 0.44 | Polyketide | shanorellin | Chaetomium globosum CBS 148.51
BGC0001810.1 |  | 0.44 | Polyketide | trehangelin | Polymorphospora rubra
BGC0001120.1 |  | 0.44 | NRP, Polyketide | burkholderic acid | Burkholderia thailandensis E264

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
c00004_NZ_QEKH.. - Region 1 - RRE-containing
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 127,358 - 147,633 nt. (total: 20,276 nt) Show pHMM detection rules used
RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | RRE-containing | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0001664.1 |  | 0.14 | Terpene | merosterol | Scytonema sp. PCC 10023
BGC0000677.1 |  | 0.14 | Terpene | cyclooctatin | Streptomyces melanosporofaciens
BGC0001605.1 |  | 0.14 | Terpene | gibberellin | Sinorhizobium fredii NGR234
BGC0000804.1 |  | 0.13 | Saccharide | acarviostatin I03, acarviostatin II03, acarviostatin III03, acarviostatin IV03 | Streptomyces coelicoflavus ZG0656
BGC0000906.1 |  | 0.13 | Other | heme D1 | Heliophilum fasciatum
BGC0000665.1 |  | 0.13 | Terpene, Alkaloid | xiamycin | Streptomyces sp. HKI0576
BGC0000666.1 |  | 0.13 | Terpene | xiamycin A | Streptomyces sp. SCSIO 02999
BGC0000905.1 |  | 0.13 | Other | heme D1 | Heliobacillus mobilis
BGC0001914.1 |  | 0.13 | Other | benzastatin J, 7-hydroxyl benzastatin B, 7-hydroxyl O-demethylbenzastatin A, JBIR-67, 7-hydroxyl benzastatin F, 7-hydroxyl O-demethylbenzastatin D, O-demethylvirantmycin, 7-hydroxyl benzastatin D, virantmycin, benzastatin K, methylbenzastatin K | Streptomyces sp. RI18
BGC0001529.1 |  | 0.13 | Alkaloid | bezastatin derivates | Streptomyces sp. RI18

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0001664.1 |  | 0.43 | Terpene | merosterol | Scytonema sp. PCC 10023
BGC0000677.1 |  | 0.43 | Terpene | cyclooctatin | Streptomyces melanosporofaciens
BGC0001605.1 |  | 0.43 | Terpene | gibberellin | Sinorhizobium fredii NGR234
BGC0000804.1 |  | 0.42 | Saccharide | acarviostatin I03, acarviostatin II03, acarviostatin III03, acarviostatin IV03 | Streptomyces coelicoflavus ZG0656
BGC0000906.1 |  | 0.42 | Other | heme D1 | Heliophilum fasciatum
BGC0000665.1 |  | 0.42 | Terpene, Alkaloid | xiamycin | Streptomyces sp. HKI0576
BGC0000666.1 |  | 0.42 | Terpene | xiamycin A | Streptomyces sp. SCSIO 02999
BGC0000905.1 |  | 0.42 | Other | heme D1 | Heliobacillus mobilis
BGC0001914.1 |  | 0.41 | Other | benzastatin J, 7-hydroxyl benzastatin B, 7-hydroxyl O-demethylbenzastatin A, JBIR-67, 7-hydroxyl benzastatin F, 7-hydroxyl O-demethylbenzastatin D, O-demethylvirantmycin, 7-hydroxyl benzastatin D, virantmycin, benzastatin K, methylbenzastatin K | Streptomyces sp. RI18
BGC0001529.1 |  | 0.41 | Alkaloid | bezastatin derivates | Streptomyces sp. RI18

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
c00005_NZ_QEKH.. - Region 1 - RRE-containing
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 162,659 - 182,916 nt. (total: 20,258 nt) Show pHMM detection rules used
RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

No matches found.

No matches found.

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
c00007_NZ_QEKH.. - Region 1 - RiPP-like,proteusin
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 39,510 - 64,478 nt. (total: 24,969 nt) Show pHMM detection rules used
proteusin: (PoyD or TIGR03793)
RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | proteusin | RiPP-like | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | --- | ---
BGC0000599.1 |  |  | 0.44 | RiPP | thuricin CD α, thuricin CD β | Bacillus thuringiensis
BGC0001745.1 |  |  | 0.43 | RiPP | PlpA1, PlpA2, PlpA3 | Pleurocapsa sp. PCC 7319
BGC0000554.1 |  |  | 0.42 | RiPP | SRO15-3108 | Streptomyces filamentosus NRRL 15998
BGC0001485.1 |  |  | 0.41 | Other | 3-demethylchuangxinmycin | Actinoplanes tsinanensis
BGC0001546.1 |  |  | 0.41 | Alkaloid | chuangxinmycin | Actinoplanes tsinanensis
BGC0000617.1 |  |  | 0.40 | RiPP | coagulin | Bacillus coagulans
BGC0000598.1 |  |  | 0.39 | RiPP | polytheonamide A, polytheonamide B | Streptomyces diastatochromogenes Tü6028
BGC0001210.1 |  |  | 0.39 | RiPP | pseudomycoicidin | Bacillus pseudomycoides DSM 12442
BGC0000504.1 |  |  | 0.38 | RiPP | cytolysin ClyLl, cytolysin ClyLs | Plasmid pAD1
BGC0000619.1 |  |  | 0.38 | RiPP | gassericin T | Lactobacillus gasseri

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0001485.1 |  | 0.55 | Other | 3-demethylchuangxinmycin | Actinoplanes tsinanensis
BGC0001546.1 |  | 0.55 | Alkaloid | chuangxinmycin | Actinoplanes tsinanensis
BGC0000599.1 |  | 0.55 | RiPP | thuricin CD α, thuricin CD β | Bacillus thuringiensis
BGC0001745.1 |  | 0.54 | RiPP | PlpA1, PlpA2, PlpA3 | Pleurocapsa sp. PCC 7319
BGC0000554.1 |  | 0.54 | RiPP | SRO15-3108 | Streptomyces filamentosus NRRL 15998
BGC0000484.1 |  | 0.53 | RiPP | glycocin F | Lactobacillus plantarum
BGC0000617.1 |  | 0.52 | RiPP | coagulin | Bacillus coagulans
BGC0000598.1 |  | 0.52 | RiPP | polytheonamide A, polytheonamide B | Streptomyces diastatochromogenes Tü6028
BGC0001210.1 |  | 0.52 | RiPP | pseudomycoicidin | Bacillus pseudomycoides DSM 12442
BGC0000504.1 |  | 0.51 | RiPP | cytolysin ClyLl, cytolysin ClyLs | Plasmid pAD1

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
c00012_NZ_QEKH.. - Region 1 - arylpolyene
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 34,038 - 91,363 nt. (total: 57,326 nt) Show pHMM detection rules used
arylpolyene: (APE_KS1 or APE_KS2)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | arylpolyene | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0001075.1 |  | 0.29 | Terpene, Polyketide | aurachin RE | Rhodococcus erythropolis
BGC0000220.1 |  | 0.24 | Polyketide | enterocin | Streptomyces maritimus
BGC0001343.1 |  | 0.22 | Polyketide | aurachin A, aurachin D | Stigmatella aurantiaca Sg a15
BGC0000935.1 |  | 0.22 | Other (Aminocoumarin), Polyketide | esmeraldin | Streptomyces antibioticus
BGC0001895.1 |  | 0.22 | Polyketide | huanglongmycin A, huanglongmycin B, huanglongmycin C | Streptomyces sp. CB09001
BGC0000235.1 |  | 0.22 | Polyketide | kiamycin | Streptomyces sp. W007
BGC0000204.1 |  | 0.22 | Polyketide | benastatin A, benastatin B, BE-43767, TAN1532B | Streptomyces sp. A2991200
BGC0000219.1 |  | 0.22 | Polyketide, Saccharide | elloramycin | Streptomyces olivaceus
BGC0001897.1 |  | 0.21 | Polyketide | cepacin A | Burkholderia ambifaria IOP40-10
BGC0000343.1 |  | 0.21 | NRP | enterobactin | Pseudomonas sp. J465

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0001075.1 |  | 0.62 | Terpene, Polyketide | aurachin RE | Rhodococcus erythropolis
BGC0000220.1 |  | 0.57 | Polyketide | enterocin | Streptomyces maritimus
BGC0001343.1 |  | 0.55 | Polyketide | aurachin A, aurachin D | Stigmatella aurantiaca Sg a15
BGC0000935.1 |  | 0.55 | Other (Aminocoumarin), Polyketide | esmeraldin | Streptomyces antibioticus
BGC0001895.1 |  | 0.55 | Polyketide | huanglongmycin A, huanglongmycin B, huanglongmycin C | Streptomyces sp. CB09001
BGC0000235.1 |  | 0.55 | Polyketide | kiamycin | Streptomyces sp. W007
BGC0000204.1 |  | 0.55 | Polyketide | benastatin A, benastatin B, BE-43767, TAN1532B | Streptomyces sp. A2991200
BGC0000219.1 |  | 0.54 | Polyketide, Saccharide | elloramycin | Streptomyces olivaceus
BGC0001897.1 |  | 0.54 | Polyketide | cepacin A | Burkholderia ambifaria IOP40-10
BGC0000343.1 |  | 0.54 | NRP | enterobactin | Pseudomonas sp. J465

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
c00023_NZ_QEKH.. - Region 1 - RRE-containing
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1 - 16,393 nt. (total: 16,393 nt) Show pHMM detection rules used
Region on contig edge.
RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | RRE-containing | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000575.1 |  | 0.16 | RiPP | lariatin | Rhodococcus jostii
BGC0000554.1 |  | 0.15 | RiPP | SRO15-3108 | Streptomyces filamentosus NRRL 15998
BGC0001484.1 |  | 0.14 | Other | 2'-chloropentostatin, 2'-amino-2'-deoxyadenosine | Actinomadura sp. ATCC 39365
BGC0000243.1 |  | 0.14 | Polyketide | macrotetrolide | Streptomyces griseus subsp. griseus
BGC0001645.1 |  | 0.14 | RiPP | lagmysin | Streptomyces sp. NRRL S-118
BGC0000768.1 |  | 0.13 | Saccharide | gellan polysaccharide | Sphingomonas elodea ATCC 31461
BGC0000797.1 |  | 0.13 | Saccharide | sphingan polysaccharide | Sphingomonas sp. S88
BGC0001684.1 |  | 0.13 | Other | N-acyloxyacyl glutamine | Klebsiella variicola
BGC0000775.1 |  | 0.13 | Saccharide | lipopolysaccharide | Legionella pneumophila
BGC0001120.1 |  | 0.13 | NRP, Polyketide | burkholderic acid | Burkholderia thailandensis E264

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000575.1 |  | 0.46 | RiPP | lariatin | Rhodococcus jostii
BGC0000554.1 |  | 0.46 | RiPP | SRO15-3108 | Streptomyces filamentosus NRRL 15998
BGC0001484.1 |  | 0.43 | Other | 2'-chloropentostatin, 2'-amino-2'-deoxyadenosine | Actinomadura sp. ATCC 39365
BGC0000243.1 |  | 0.43 | Polyketide | macrotetrolide | Streptomyces griseus subsp. griseus
BGC0001645.1 |  | 0.43 | RiPP | lagmysin | Streptomyces sp. NRRL S-118
BGC0000768.1 |  | 0.42 | Saccharide | gellan polysaccharide | Sphingomonas elodea ATCC 31461
BGC0000797.1 |  | 0.42 | Saccharide | sphingan polysaccharide | Sphingomonas sp. S88
BGC0001684.1 |  | 0.42 | Other | N-acyloxyacyl glutamine | Klebsiella variicola
BGC0000775.1 |  | 0.42 | Saccharide | lipopolysaccharide | Legionella pneumophila
BGC0001120.1 |  | 0.42 | NRP, Polyketide | burkholderic acid | Burkholderia thailandensis E264

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names