Search NORINE for peptide: strict or relaxed

AMP-binding (449..848): X

NRPSPredictor2: phe, trp, phg, tyr, bht

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aromatic

Large clusters prediction:

phe, trp, phg, tyr, bht

Small clusters prediction:

N/A

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DAaimAGVCK

Nearest Stachelhaus code:

phe

Stachelhaus code match:

70% (weak)

AMP-binding (1915..2310): X

NRPSPredictor2: val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:

hydrophilic

Large clusters prediction:

N/A

Small clusters prediction:

val, leu, ile, abu, iva

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DVyqmGcICK

Nearest Stachelhaus code:

pro

Stachelhaus code match:

60% (weak)

AMP-binding (2960..3360): cys

NRPSPredictor2: cys

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

cys

Small clusters prediction:

cys

Single AA prediction:

cys

Stachelhaus prediction details:

Stachelhaus sequence:

DLYqMSaIWK

Nearest Stachelhaus code:

cys

Stachelhaus code match:

80% (moderate)

Search NORINE for peptide: strict or relaxed

AMP-binding (475..877): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

ser, thr, dhpg, hpg

Small clusters prediction:

ser

Single AA prediction:

ser

Stachelhaus prediction details:

Stachelhaus sequence:

DVWHFSLVDK

Nearest Stachelhaus code:

ser

Stachelhaus code match:

100% (strong)

Search NORINE for peptide: strict or relaxed

AMP-binding (33..438): dhb

NRPSPredictor2: dhb

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aromatic

Large clusters prediction:

dhb, sal

Small clusters prediction:

dhb, sal

Single AA prediction:

dhb

Stachelhaus prediction details:

Stachelhaus sequence:

PMPAQGVVNK

Nearest Stachelhaus code:

dhb

Stachelhaus code match:

100% (strong)

Search NORINE for peptide: strict or relaxed

AMP-binding (462..870): tyr

NRPSPredictor2: tyr

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aromatic

Large clusters prediction:

phe, trp, phg, tyr, bht

Small clusters prediction:

tyr, bht

Single AA prediction:

tyr

Stachelhaus prediction details:

Stachelhaus sequence:

DASTVAAVCK

Nearest Stachelhaus code:

tyr

Stachelhaus code match:

100% (strong)

AMP-binding (1979..2391): val

NRPSPredictor2: val

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

val, leu, ile, abu, iva

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DAYFlGVTFK

Nearest Stachelhaus code:

val

Stachelhaus code match:

90% (moderate)

AMP-binding (3048..3457): leu

NRPSPredictor2: leu

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

val, leu, ile, abu, iva

Single AA prediction:

leu

Stachelhaus prediction details:

Stachelhaus sequence:

DAlFiGCVFK

Nearest Stachelhaus code:

leu

Stachelhaus code match:

80% (moderate)

AMP-binding (4570..4976): val

NRPSPredictor2: val

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

val, leu, ile, abu, iva

Single AA prediction:

val

Stachelhaus prediction details:

Stachelhaus sequence:

DAlFLGgVwK

Nearest Stachelhaus code:

leu

Stachelhaus code match:

70% (weak)

AMP-binding (5633..6050): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

ser, thr, dhpg, hpg

Small clusters prediction:

ser

Single AA prediction:

ser

Stachelhaus prediction details:

Stachelhaus sequence:

DVWHFSLVDK

Nearest Stachelhaus code:

ser

Stachelhaus code match:

100% (strong)

Search NORINE for peptide: strict or relaxed

PKS_AT (706..892): pk

ATSignature: (unknown)

No matches above 50%

minowa: inactive

Prediction, score:

inactive: 19.3

Malonyl-CoA: 9.5

trans-1,2-CPDA: 0.0

fatty_acid: 0.0

Propionyl-CoA: 0.0

Methylmalonyl-CoA: 0.0

Methoxymalonyl-CoA: 0.0

Isobutyryl-CoA: 0.0

Ethylmalonyl-CoA: 0.0

CHC-CoA: 0.0

Benzoyl-CoA: 0.0

Acetyl-CoA: 0.0

3-Methylbutyryl-CoA: 0.0

2-Methylbutyryl-CoA: 0.0

AMP-binding (2172..2562): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

gly, ala

Single AA prediction:

gly

Stachelhaus prediction details:

Stachelhaus sequence:

DILQLGVIWK

Nearest Stachelhaus code:

gly

Stachelhaus code match:

100% (strong)

PKS_AT (6..298): mal

ATSignature: Malonyl-CoA

Top 3 matches:

Malonyl-CoA: 79.2%

inactive: 70.8%

2-Rhyd-Malonyl-CoA: 58.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 99.2

inactive: 37.1

Methoxymalonyl-CoA: 34.4

Methylmalonyl-CoA: 31.2

Propionyl-CoA: 19.3

CHC-CoA: 12.9

Isobutyryl-CoA: 11.1

trans-1,2-CPDA: 0.0

fatty_acid: 0.0

Ethylmalonyl-CoA: 0.0

Benzoyl-CoA: 0.0

Acetyl-CoA: 0.0

3-Methylbutyryl-CoA: 0.0

2-Methylbutyryl-CoA: 0.0

Search NORINE for peptide: strict or relaxed

AMP-binding (1225..1619): ile

NRPSPredictor2: ile

SVM prediction details:

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

gly, ala, val, leu, ile, abu, iva

Small clusters prediction:

val, leu, ile, abu, iva

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

DGFFLGcVFK

Nearest Stachelhaus code:

ile

Stachelhaus code match:

90% (moderate)

Search NORINE for peptide: strict or relaxed

AMP-binding (583..971): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:

hydrophobic-aliphatic

Large clusters prediction:

N/A

Small clusters prediction:

N/A

Single AA prediction:

N/A

Stachelhaus prediction details:

Stachelhaus sequence:

gdWSisMVaK

Nearest Stachelhaus code:

thr

Stachelhaus code match:

50% (weak)