GCF_000393975.1_Ente_pall_BAA-351_V1_genomic - 4 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_KB946300.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	T3PKS	819,224	860,378

NZ_KB946307.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	terpene	140,628	161,524

NZ_KB946310.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RiPP-like	116,830	131,740	enterocin A	RiPP	66%
Region 11.2	RiPP-like	364,576	379,483

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	T3PKS	819,224	860,378
Region 8.1	terpene	140,628	161,524
Region 11.1	RiPP-like	116,830	131,740	enterocin A	RiPP	66%
Region 11.2	RiPP-like	364,576	379,483

No secondary metabolite regions were found in these records:: NZ_KB946301.1; NZ_KB946302.1; NZ_KB946303.1; NZ_KB946304.1; NZ_KB946305.1; NZ_KB946306.1; NZ_KB946308.1; NZ_KB946309.1; NZ_KB946311.1; NZ_KB946312.1; NZ_KB946313.1

Compact view

NZ_KB946300.1 - Region 1 - T3PKS

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Location: 819,224 - 860,378 nt. (total: 41,155 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000286.1	0.23	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0001514.1	0.19	Other	aristeromycin	Streptomyces citricolor
BGC0000866.1	0.18	Other	polyhydroxyalkanoate	Burkholderia sp. DSM 9242
BGC0000867.1	0.18	Other	polyhydroxyalkanoic acids	Ectothiorhodospira shaposhnikovii
BGC0000255.1	0.17	Polyketide	pederin	Uncultured bacterium
BGC0001104.1	0.16	NRP, Polyketide	myxovirescin A1	Myxococcus xanthus DK 1622
BGC0001120.1	0.16	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000205.1	0.16	Polyketide	bryostatin	Candidatus Endobugula sertula
BGC0001080.1	0.14	Other (Phenazine)	endophenazine A, endophenazine B	Streptomyces anulatus
BGC0001510.1	0.14	Other	anisomycin	Streptomyces hygrospinosus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000286.1	0.56	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0001514.1	0.51	Other	aristeromycin	Streptomyces citricolor
BGC0000866.1	0.49	Other	polyhydroxyalkanoate	Burkholderia sp. DSM 9242
BGC0000867.1	0.49	Other	polyhydroxyalkanoic acids	Ectothiorhodospira shaposhnikovii
BGC0000255.1	0.48	Polyketide	pederin	Uncultured bacterium
BGC0001104.1	0.47	NRP, Polyketide	myxovirescin A1	Myxococcus xanthus DK 1622
BGC0001120.1	0.47	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000205.1	0.46	Polyketide	bryostatin	Candidatus Endobugula sertula
BGC0001080.1	0.44	Other (Phenazine)	endophenazine A, endophenazine B	Streptomyces anulatus
BGC0001510.1	0.43	Other	anisomycin	Streptomyces hygrospinosus

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_KB946307.1 - Region 1 - terpene

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Location: 140,628 - 161,524 nt. (total: 20,897 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.46	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000650.1	0.33	Terpene	carotenoid	Algoriphagus sp. KK10202C
BGC0000656.1	0.23	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000648.1	0.21	Terpene	carotenoid	Myxococcus xanthus
BGC0000640.1	0.20	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000630.1	0.19	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000646.1	0.17	Terpene	β-carotein	uncultured bacterium
BGC0000637.1	0.17	Terpene	carotenoid	Corynebacterium glutamicum
BGC0000664.1	0.16	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001456.1	0.16	Terpene	isorenieratene	Streptomyces argillaceus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.76	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000650.1	0.66	Terpene	carotenoid	Algoriphagus sp. KK10202C
BGC0000656.1	0.56	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000648.1	0.54	Terpene	carotenoid	Myxococcus xanthus
BGC0000640.1	0.52	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000630.1	0.52	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000646.1	0.49	Terpene	β-carotein	uncultured bacterium
BGC0000637.1	0.48	Terpene	carotenoid	Corynebacterium glutamicum
BGC0000664.1	0.47	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001456.1	0.46	Terpene	isorenieratene	Streptomyces argillaceus

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_KB946310.1 - Region 1 - RiPP-like

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Location: 116,830 - 131,740 nt. (total: 14,911 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000618.1	0.39	RiPP	enterocin A	Enterococcus faecium DO
BGC0000617.1	0.23	RiPP	coagulin	Bacillus coagulans
BGC0000619.1	0.20	RiPP	gassericin T	Lactobacillus gasseri
BGC0001602.1	0.20	RiPP	gassericin-T	Lactobacillus gasseri
BGC0001388.1	0.20	RiPP	gassericin E	Lactobacillus gasseri
BGC0001229.1	0.18	RiPP	SBI-06990 A1, SBI-06989 A2	Streptomyces bingchenggensis BCW-1
BGC0000624.1	0.17	RiPP	salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide	Lactobacillus salivarius
BGC0001862.1	0.16	RiPP	geocillicin	Aeribacillus pallidus
BGC0001930.1	0.16	RiPP	pallidocin	Aeribacillus pallidus
BGC0001863.1	0.16	RiPP, Terpene	bacillicn CER074	Bacillus mycoides

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000618.1	0.71	RiPP	enterocin A	Enterococcus faecium DO
BGC0000617.1	0.57	RiPP	coagulin	Bacillus coagulans
BGC0000619.1	0.53	RiPP	gassericin T	Lactobacillus gasseri
BGC0001602.1	0.53	RiPP	gassericin-T	Lactobacillus gasseri
BGC0001388.1	0.53	RiPP	gassericin E	Lactobacillus gasseri
BGC0001229.1	0.49	RiPP	SBI-06990 A1, SBI-06989 A2	Streptomyces bingchenggensis BCW-1
BGC0000624.1	0.48	RiPP	salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide	Lactobacillus salivarius
BGC0001862.1	0.47	RiPP	geocillicin	Aeribacillus pallidus
BGC0001930.1	0.47	RiPP	pallidocin	Aeribacillus pallidus
BGC0001863.1	0.47	RiPP, Terpene	bacillicn CER074	Bacillus mycoides

Similar known gene clusters

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_KB946310.1 - Region 2 - RiPP-like

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Location: 364,576 - 379,483 nt. (total: 14,908 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000619.1	0.24	RiPP	gassericin T	Lactobacillus gasseri
BGC0001602.1	0.24	RiPP	gassericin-T	Lactobacillus gasseri
BGC0001388.1	0.24	RiPP	gassericin E	Lactobacillus gasseri
BGC0000617.1	0.22	RiPP	coagulin	Bacillus coagulans
BGC0000624.1	0.19	RiPP	salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide	Lactobacillus salivarius
BGC0001229.1	0.18	RiPP	SBI-06990 A1, SBI-06989 A2	Streptomyces bingchenggensis BCW-1
BGC0000569.1	0.17	RiPP	plantazolicin	Bacillus velezensis FZB42
BGC0001173.1	0.16	RiPP	plantazolicin	Bacillus pumilus ATCC 7061
BGC0001407.1	0.16	RiPP	bicereucin	Bacillus cereus SJ1
BGC0001863.1	0.16	RiPP, Terpene	bacillicn CER074	Bacillus mycoides

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000619.1	0.57	RiPP	gassericin T	Lactobacillus gasseri
BGC0001602.1	0.57	RiPP	gassericin-T	Lactobacillus gasseri
BGC0001388.1	0.57	RiPP	gassericin E	Lactobacillus gasseri
BGC0000617.1	0.55	RiPP	coagulin	Bacillus coagulans
BGC0000624.1	0.51	RiPP	salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide	Lactobacillus salivarius
BGC0001229.1	0.50	RiPP	SBI-06990 A1, SBI-06989 A2	Streptomyces bingchenggensis BCW-1
BGC0000569.1	0.48	RiPP	plantazolicin	Bacillus velezensis FZB42
BGC0001173.1	0.47	RiPP	plantazolicin	Bacillus pumilus ATCC 7061
BGC0001407.1	0.46	RiPP	bicereucin	Bacillus cereus SJ1
BGC0001863.1	0.46	RiPP, Terpene	bacillicn CER074	Bacillus mycoides

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names