GCF_000734965.1_ASM73496v1_genomic - 7 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_JMTB01000019 (original name was: NZ_JMTB01000019.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 19.1	siderophore	16,520	30,948	aerobactin	Other	66%

NZ_JMTB01000043 (original name was: NZ_JMTB01000043.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 43.1	thiopeptide	60,657	86,959	O-antigen	Saccharide	14%

NZ_JMTB01000080 (original name was: NZ_JMTB01000080.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 79.1	butyrolactone	1,316	11,717

NZ_JMTB01000099 (original name was: NZ_JMTB01000099.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 98.1	NRPS	30,260	62,344	amychelin	NRP	18%

NZ_JMTB01000114 (original name was: NZ_JMTB01000114.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 113.1	RiPP-like	1	8,163

NZ_JMTB01000117 (original name was: NZ_JMTB01000117.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 116.1	arylpolyene	149,613	193,209	aryl polyenes	Other	100%

NZ_JMTB01000128 (original name was: NZ_JMTB01000128.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 127.1	hserlactone	16,873	37,517

No secondary metabolite regions were found in these records:: NZ_JMTB01000001 (original name was: NZ_JMTB01000001.1); NZ_JMTB01000002 (original name was: NZ_JMTB01000002.1); NZ_JMTB01000003 (original name was: NZ_JMTB01000003.1); NZ_JMTB01000004 (original name was: NZ_JMTB01000004.1); NZ_JMTB01000005 (original name was: NZ_JMTB01000005.1); NZ_JMTB01000006 (original name was: NZ_JMTB01000006.1); NZ_JMTB01000007 (original name was: NZ_JMTB01000007.1); NZ_JMTB01000008 (original name was: NZ_JMTB01000008.1); NZ_JMTB01000009 (original name was: NZ_JMTB01000009.1); NZ_JMTB01000010 (original name was: NZ_JMTB01000010.1); NZ_JMTB01000011 (original name was: NZ_JMTB01000011.1); NZ_JMTB01000012 (original name was: NZ_JMTB01000012.1); NZ_JMTB01000013 (original name was: NZ_JMTB01000013.1); NZ_JMTB01000014 (original name was: NZ_JMTB01000014.1); NZ_JMTB01000015 (original name was: NZ_JMTB01000015.1); NZ_JMTB01000016 (original name was: NZ_JMTB01000016.1); NZ_JMTB01000017 (original name was: NZ_JMTB01000017.1); NZ_JMTB01000018 (original name was: NZ_JMTB01000018.1); NZ_JMTB01000020 (original name was: NZ_JMTB01000020.1); NZ_JMTB01000021 (original name was: NZ_JMTB01000021.1); NZ_JMTB01000022 (original name was: NZ_JMTB01000022.1); NZ_JMTB01000023 (original name was: NZ_JMTB01000023.1); NZ_JMTB01000024 (original name was: NZ_JMTB01000024.1); NZ_JMTB01000025 (original name was: NZ_JMTB01000025.1); NZ_JMTB01000026 (original name was: NZ_JMTB01000026.1); NZ_JMTB01000027 (original name was: NZ_JMTB01000027.1); NZ_JMTB01000028 (original name was: NZ_JMTB01000028.1); NZ_JMTB01000029 (original name was: NZ_JMTB01000029.1); NZ_JMTB01000030 (original name was: NZ_JMTB01000030.1); NZ_JMTB01000031 (original name was: NZ_JMTB01000031.1); NZ_JMTB01000032 (original name was: NZ_JMTB01000032.1); NZ_JMTB01000033 (original name was: NZ_JMTB01000033.1); NZ_JMTB01000034 (original name was: NZ_JMTB01000034.1); NZ_JMTB01000035 (original name was: NZ_JMTB01000035.1); NZ_JMTB01000036 (original name was: NZ_JMTB01000036.1); NZ_JMTB01000037 (original name was: NZ_JMTB01000037.1); NZ_JMTB01000038 (original name was: NZ_JMTB01000038.1); NZ_JMTB01000039 (original name was: NZ_JMTB01000039.1); NZ_JMTB01000040 (original name was: NZ_JMTB01000040.1); NZ_JMTB01000041 (original name was: NZ_JMTB01000041.1); NZ_JMTB01000042 (original name was: NZ_JMTB01000042.1); NZ_JMTB01000044 (original name was: NZ_JMTB01000044.1); NZ_JMTB01000045 (original name was: NZ_JMTB01000045.1); NZ_JMTB01000046 (original name was: NZ_JMTB01000046.1); NZ_JMTB01000047 (original name was: NZ_JMTB01000047.1); NZ_JMTB01000048 (original name was: NZ_JMTB01000048.1); NZ_JMTB01000049 (original name was: NZ_JMTB01000049.1); NZ_JMTB01000050 (original name was: NZ_JMTB01000050.1); NZ_JMTB01000051 (original name was: NZ_JMTB01000051.1); NZ_JMTB01000052 (original name was: NZ_JMTB01000052.1); NZ_JMTB01000053 (original name was: NZ_JMTB01000053.1); NZ_JMTB01000054 (original name was: NZ_JMTB01000054.1); NZ_JMTB01000056 (original name was: NZ_JMTB01000056.1); NZ_JMTB01000057 (original name was: NZ_JMTB01000057.1); NZ_JMTB01000058 (original name was: NZ_JMTB01000058.1); NZ_JMTB01000059 (original name was: NZ_JMTB01000059.1); NZ_JMTB01000060 (original name was: NZ_JMTB01000060.1); NZ_JMTB01000061 (original name was: NZ_JMTB01000061.1); NZ_JMTB01000062 (original name was: NZ_JMTB01000062.1); NZ_JMTB01000063 (original name was: NZ_JMTB01000063.1); NZ_JMTB01000064 (original name was: NZ_JMTB01000064.1); NZ_JMTB01000065 (original name was: NZ_JMTB01000065.1); NZ_JMTB01000066 (original name was: NZ_JMTB01000066.1); NZ_JMTB01000067 (original name was: NZ_JMTB01000067.1); NZ_JMTB01000068 (original name was: NZ_JMTB01000068.1); NZ_JMTB01000069 (original name was: NZ_JMTB01000069.1); NZ_JMTB01000070 (original name was: NZ_JMTB01000070.1); NZ_JMTB01000071 (original name was: NZ_JMTB01000071.1); NZ_JMTB01000072 (original name was: NZ_JMTB01000072.1); NZ_JMTB01000073 (original name was: NZ_JMTB01000073.1); NZ_JMTB01000074 (original name was: NZ_JMTB01000074.1); NZ_JMTB01000075 (original name was: NZ_JMTB01000075.1); NZ_JMTB01000076 (original name was: NZ_JMTB01000076.1); NZ_JMTB01000077 (original name was: NZ_JMTB01000077.1); NZ_JMTB01000078 (original name was: NZ_JMTB01000078.1); NZ_JMTB01000079 (original name was: NZ_JMTB01000079.1); NZ_JMTB01000081 (original name was: NZ_JMTB01000081.1); NZ_JMTB01000082 (original name was: NZ_JMTB01000082.1); NZ_JMTB01000083 (original name was: NZ_JMTB01000083.1); NZ_JMTB01000084 (original name was: NZ_JMTB01000084.1); NZ_JMTB01000085 (original name was: NZ_JMTB01000085.1); NZ_JMTB01000086 (original name was: NZ_JMTB01000086.1); NZ_JMTB01000087 (original name was: NZ_JMTB01000087.1); NZ_JMTB01000088 (original name was: NZ_JMTB01000088.1); NZ_JMTB01000089 (original name was: NZ_JMTB01000089.1); NZ_JMTB01000090 (original name was: NZ_JMTB01000090.1); NZ_JMTB01000091 (original name was: NZ_JMTB01000091.1); NZ_JMTB01000092 (original name was: NZ_JMTB01000092.1); NZ_JMTB01000093 (original name was: NZ_JMTB01000093.1); NZ_JMTB01000094 (original name was: NZ_JMTB01000094.1); NZ_JMTB01000095 (original name was: NZ_JMTB01000095.1); NZ_JMTB01000096 (original name was: NZ_JMTB01000096.1); NZ_JMTB01000097 (original name was: NZ_JMTB01000097.1); NZ_JMTB01000098 (original name was: NZ_JMTB01000098.1); NZ_JMTB01000100 (original name was: NZ_JMTB01000100.1); NZ_JMTB01000101 (original name was: NZ_JMTB01000101.1); NZ_JMTB01000102 (original name was: NZ_JMTB01000102.1); NZ_JMTB01000103 (original name was: NZ_JMTB01000103.1); NZ_JMTB01000104 (original name was: NZ_JMTB01000104.1); NZ_JMTB01000105 (original name was: NZ_JMTB01000105.1); NZ_JMTB01000106 (original name was: NZ_JMTB01000106.1); NZ_JMTB01000107 (original name was: NZ_JMTB01000107.1); NZ_JMTB01000108 (original name was: NZ_JMTB01000108.1); NZ_JMTB01000109 (original name was: NZ_JMTB01000109.1); NZ_JMTB01000110 (original name was: NZ_JMTB01000110.1); NZ_JMTB01000111 (original name was: NZ_JMTB01000111.1); NZ_JMTB01000112 (original name was: NZ_JMTB01000112.1); NZ_JMTB01000113 (original name was: NZ_JMTB01000113.1); NZ_JMTB01000115 (original name was: NZ_JMTB01000115.1); NZ_JMTB01000116 (original name was: NZ_JMTB01000116.1); NZ_JMTB01000118 (original name was: NZ_JMTB01000118.1); NZ_JMTB01000119 (original name was: NZ_JMTB01000119.1); NZ_JMTB01000120 (original name was: NZ_JMTB01000120.1); NZ_JMTB01000121 (original name was: NZ_JMTB01000121.1); NZ_JMTB01000122 (original name was: NZ_JMTB01000122.1); NZ_JMTB01000123 (original name was: NZ_JMTB01000123.1); NZ_JMTB01000124 (original name was: NZ_JMTB01000124.1); NZ_JMTB01000125 (original name was: NZ_JMTB01000125.1); NZ_JMTB01000126 (original name was: NZ_JMTB01000126.1); NZ_JMTB01000127 (original name was: NZ_JMTB01000127.1); NZ_JMTB01000129 (original name was: NZ_JMTB01000129.1); NZ_JMTB01000130 (original name was: NZ_JMTB01000130.1); NZ_JMTB01000131 (original name was: NZ_JMTB01000131.1); NZ_JMTB01000132 (original name was: NZ_JMTB01000132.1); NZ_JMTB01000133 (original name was: NZ_JMTB01000133.1); NZ_JMTB01000134 (original name was: NZ_JMTB01000134.1); NZ_JMTB01000135 (original name was: NZ_JMTB01000135.1); NZ_JMTB01000136 (original name was: NZ_JMTB01000136.1); NZ_JMTB01000137 (original name was: NZ_JMTB01000137.1); NZ_JMTB01000138 (original name was: NZ_JMTB01000138.1); NZ_JMTB01000139 (original name was: NZ_JMTB01000139.1); NZ_JMTB01000140 (original name was: NZ_JMTB01000140.1); NZ_JMTB01000141 (original name was: NZ_JMTB01000141.1); NZ_JMTB01000142 (original name was: NZ_JMTB01000142.1); NZ_JMTB01000143 (original name was: NZ_JMTB01000143.1); NZ_JMTB01000144 (original name was: NZ_JMTB01000144.1); NZ_JMTB01000145 (original name was: NZ_JMTB01000145.1); NZ_JMTB01000146 (original name was: NZ_JMTB01000146.1); NZ_JMTB01000147 (original name was: NZ_JMTB01000147.1); NZ_JMTB01000148 (original name was: NZ_JMTB01000148.1); NZ_JMTB01000149 (original name was: NZ_JMTB01000149.1); NZ_JMTB01000150 (original name was: NZ_JMTB01000150.1); NZ_JMTB01000151 (original name was: NZ_JMTB01000151.1); NZ_JMTB01000152 (original name was: NZ_JMTB01000152.1); NZ_JMTB01000153 (original name was: NZ_JMTB01000153.1); NZ_JMTB01000154 (original name was: NZ_JMTB01000154.1); NZ_JMTB01000155 (original name was: NZ_JMTB01000155.1); NZ_JMTB01000156 (original name was: NZ_JMTB01000156.1); NZ_JMTB01000157 (original name was: NZ_JMTB01000157.1); NZ_JMTB01000158 (original name was: NZ_JMTB01000158.1); NZ_JMTB01000159 (original name was: NZ_JMTB01000159.1); NZ_JMTB01000160 (original name was: NZ_JMTB01000160.1); NZ_JMTB01000161 (original name was: NZ_JMTB01000161.1); NZ_JMTB01000162 (original name was: NZ_JMTB01000162.1); NZ_JMTB01000163 (original name was: NZ_JMTB01000163.1); NZ_JMTB01000164 (original name was: NZ_JMTB01000164.1); NZ_JMTB01000165 (original name was: NZ_JMTB01000165.1); NZ_JMTB01000166 (original name was: NZ_JMTB01000166.1); NZ_JMTB01000167 (original name was: NZ_JMTB01000167.1); NZ_JMTB01000168 (original name was: NZ_JMTB01000168.1); NZ_JMTB01000169 (original name was: NZ_JMTB01000169.1); NZ_JMTB01000170 (original name was: NZ_JMTB01000170.1); NZ_JMTB01000171 (original name was: NZ_JMTB01000171.1); NZ_JMTB01000172 (original name was: NZ_JMTB01000172.1)

Compact view

c00019_NZ_JMTB.. - Region 1 - siderophore

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Location: 16,520 - 30,948 nt. (total: 14,429 nt) Show pHMM detection rules used

siderophore: IucA_IucC

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001499.1	0.56	Other	aerobactin	Pantoea ananatis
BGC0001498.1	0.37	Other	aerobactin	Xenorhabdus szentirmaii DSM 16338
BGC0001572.1	0.29	Other	desferrioxamine E	Pantoea agglomerans
BGC0001713.1	0.28	Other	ochrobactin	Ochrobactrum anthropi
BGC0000939.1	0.26	Other	aerobactin	Grimontia hollisae
BGC0000942.1	0.25	Other	petrobactin	Bacillus anthracis str. Ames
BGC0001555.1	0.25	RiPP	colicin V	Escherichia coli chi7122
BGC0001408.1	0.22	Other	xanthoferrin	Xanthomonas oryzae pv. oryzae KACC 10331
BGC0001478.1	0.22	Other	desferrioxamine E	Streptomyces sp. ID38640
BGC0000941.1	0.21	Other	desferrioxamin B	Streptomyces griseus subsp. griseus NBRC 13350

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001499.1	0.82	Other	aerobactin	Pantoea ananatis
BGC0001498.1	0.69	Other	aerobactin	Xenorhabdus szentirmaii DSM 16338
BGC0001572.1	0.63	Other	desferrioxamine E	Pantoea agglomerans
BGC0001713.1	0.62	Other	ochrobactin	Ochrobactrum anthropi
BGC0000939.1	0.59	Other	aerobactin	Grimontia hollisae
BGC0000942.1	0.59	Other	petrobactin	Bacillus anthracis str. Ames
BGC0001555.1	0.58	RiPP	colicin V	Escherichia coli chi7122
BGC0001408.1	0.55	Other	xanthoferrin	Xanthomonas oryzae pv. oryzae KACC 10331
BGC0001478.1	0.55	Other	desferrioxamine E	Streptomyces sp. ID38640
BGC0000941.1	0.54	Other	desferrioxamin B	Streptomyces griseus subsp. griseus NBRC 13350

Similar known gene clusters

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00043_NZ_JMTB.. - Region 1 - thiopeptide

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Location: 60,657 - 86,959 nt. (total: 26,303 nt) Show pHMM detection rules used

thiopeptide: ((YcaO or TIGR03882) and ((thio_amide and (PF06968 or PF04055 or PF07366)) or Lant_dehydr_C or Lant_dehydr_N or PF07366 or PF06968 or PF04055) or thiostrepton)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Thiopeptides

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000784.1	0.25	Saccharide	O-antigen	Pseudomonas aeruginosa
BGC0000781.1	0.16	Saccharide	O-antigen	Pseudomonas aeruginosa
BGC0001534.1	0.14	Other	branched-chain fatty acids	Streptomyces filamentosus
BGC0000800.1	0.14	Saccharide	xanthan	Xanthomonas campestris
BGC0001285.1	0.07	Other (Fatty acid)	pseudopyronine A, pseudopyronine B	Pseudomonas putida
BGC0001302.1	0.06	Other	lomofungin	Streptomyces lomondensis
BGC0002012.1	0.05	Polyketide	julichrome Q3-3, julichrome Q3-5	Streptomyces afghaniensis 772
BGC0001283.1	0.05	Polyketide	arsono-polyketide	Streptomyces lividans 1326
BGC0001196.1	0.04	NRP	desotamide	Streptomyces scopuliridis
BGC0001814.1	0.04	NRP	ulleungmycin	Streptomyces sp. KCB13F003

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000784.1	0.58	Saccharide	O-antigen	Pseudomonas aeruginosa
BGC0000781.1	0.47	Saccharide	O-antigen	Pseudomonas aeruginosa
BGC0001534.1	0.44	Other	branched-chain fatty acids	Streptomyces filamentosus
BGC0000800.1	0.44	Saccharide	xanthan	Xanthomonas campestris
BGC0001285.1	0.29	Other (Fatty acid)	pseudopyronine A, pseudopyronine B	Pseudomonas putida
BGC0001302.1	0.24	Other	lomofungin	Streptomyces lomondensis
BGC0002012.1	0.23	Polyketide	julichrome Q3-3, julichrome Q3-5	Streptomyces afghaniensis 772
BGC0001283.1	0.22	Polyketide	arsono-polyketide	Streptomyces lividans 1326
BGC0001196.1	0.20	NRP	desotamide	Streptomyces scopuliridis
BGC0001814.1	0.17	NRP	ulleungmycin	Streptomyces sp. KCB13F003

Similar known gene clusters

Thiopeptide predictions

No core peptides found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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Thiopeptides

Core peptide predictions

No core peptides found.

c00079_NZ_JMTB.. - Region 1 - butyrolactone

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Location: 1,316 - 11,717 nt. (total: 10,402 nt) Show pHMM detection rules used

butyrolactone: AfsA

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000848.1	0.34	Other	A-factor	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000849.1	0.25	Other (Butyrolactone)	SCB1, SCB2, SCB3	Streptomyces coelicolor A3(2)
BGC0000850.1	0.22	Other	γ-butyrolactone	Streptomyces acidiscabies
BGC0001310.1	0.21	Terpene	naringenin	Streptomyces clavuligerus ATCC 27064
BGC0001485.1	0.14	Other	3-demethylchuangxinmycin	Actinoplanes tsinanensis
BGC0001546.1	0.14	Alkaloid	chuangxinmycin	Actinoplanes tsinanensis
BGC0001965.1	0.13	Other	nybomycin	Streptomyces albus subsp. chlorinus
BGC0002009.1	0.13	Polyketide	kanglemycin A, kanglemycin V1, kanglemycin V2	Amycolatopsis vancoresmycina
BGC0001140.1	0.13	Terpene	platensimycin, platencin	Streptomyces platensis
BGC0000666.1	0.13	Terpene	xiamycin A	Streptomyces sp. SCSIO 02999

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000848.1	0.67	Other	A-factor	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000849.1	0.59	Other (Butyrolactone)	SCB1, SCB2, SCB3	Streptomyces coelicolor A3(2)
BGC0000850.1	0.56	Other	γ-butyrolactone	Streptomyces acidiscabies
BGC0001310.1	0.53	Terpene	naringenin	Streptomyces clavuligerus ATCC 27064
BGC0001485.1	0.44	Other	3-demethylchuangxinmycin	Actinoplanes tsinanensis
BGC0001546.1	0.44	Alkaloid	chuangxinmycin	Actinoplanes tsinanensis
BGC0001965.1	0.42	Other	nybomycin	Streptomyces albus subsp. chlorinus
BGC0002009.1	0.42	Polyketide	kanglemycin A, kanglemycin V1, kanglemycin V2	Amycolatopsis vancoresmycina
BGC0001140.1	0.42	Terpene	platensimycin, platencin	Streptomyces platensis
BGC0000666.1	0.42	Terpene	xiamycin A	Streptomyces sp. SCSIO 02999

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

c00098_NZ_JMTB.. - Region 1 - NRPS

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Location: 30,260 - 62,344 nt. (total: 32,085 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

Pfam domains

TIGRFAM domains

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001615.1	0.32	NRP	hexose-palythine-serine, hexose-shinorine	Heteroscytonema crispum UCFS10
BGC0001131.1	0.24	NRP	ambactin	Xenorhabdus miraniensis
BGC0001833.1	0.24	NRP	icosalide A, icosalide B	Burkholderia gladioli
BGC0001361.1	0.23	Terpene	sodorifen	Serratia plymuthica 4Rx13
BGC0001758.1	0.23	NRP	rhizomide A, rhizomide B, rhizomide C	Paraburkholderia rhizoxinica HKI 454
BGC0001132.1	0.23	NRP	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061
BGC0001128.1	0.23	NRP	luminmide	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001149.1	0.23	NRP, Saccharide	brabantamide A	Pseudomonas sp. SHC52
BGC0001723.1	0.23	Polyketide	oviedomycin	Streptomyces antibioticus
BGC0001844.1	0.23	NRP	holrhizin	Paraburkholderia rhizoxinica HKI 454

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001615.1	0.65	NRP	hexose-palythine-serine, hexose-shinorine	Heteroscytonema crispum UCFS10
BGC0001131.1	0.57	NRP	ambactin	Xenorhabdus miraniensis
BGC0001833.1	0.57	NRP	icosalide A, icosalide B	Burkholderia gladioli
BGC0001361.1	0.57	Terpene	sodorifen	Serratia plymuthica 4Rx13
BGC0001758.1	0.57	NRP	rhizomide A, rhizomide B, rhizomide C	Paraburkholderia rhizoxinica HKI 454
BGC0001132.1	0.56	NRP	xenotetrapeptide	Xenorhabdus nematophila ATCC 19061
BGC0001128.1	0.56	NRP	luminmide	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001149.1	0.56	NRP, Saccharide	brabantamide A	Pseudomonas sp. SHC52
BGC0001723.1	0.56	Polyketide	oviedomycin	Streptomyces antibioticus
BGC0001844.1	0.56	NRP	holrhizin	Paraburkholderia rhizoxinica HKI 454

Similar known gene clusters

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Detailed TIGRFAM domain annotation

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 30259 - 62344:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ser)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg98_46

Search NORINE for peptide: strict or relaxed

AMP-binding (461..859): ser

NRPSPredictor2: ser

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHFSLVDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 100% (strong)

ctg98_53

Search NORINE for peptide: strict or relaxed

AMP-binding (35..437): dhb

NRPSPredictor2: dhb

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: dhb, sal
Small clusters prediction:: dhb, sal
Single AA prediction:: dhb

Stachelhaus prediction details:

Stachelhaus sequence:: PLPAQGVVNK
Nearest Stachelhaus code:: dhb
Stachelhaus code match:: 100% (strong)

c00113_NZ_JMTB.. - Region 1 - RiPP-like

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Location: 1 - 8,163 nt. (total: 8,163 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

No matches found.

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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c00116_NZ_JMTB.. - Region 1 - arylpolyene

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Location: 149,613 - 193,209 nt. (total: 43,597 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

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core biosynthetic genes

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000836.1	0.55	Other	APE Ec	Escherichia coli CFT073
BGC0002008.1	0.54	Other	aryl polyenes	Xenorhabdus doucetiae
BGC0000837.1	0.28	Other	APE Vf	Aliivibrio fischeri ES114
BGC0001723.1	0.24	Polyketide	oviedomycin	Streptomyces antibioticus
BGC0000248.1	0.21	Polyketide	naphtocyclinone	Streptomyces arenae
BGC0000272.1	0.21	Polyketide	spore pigment	Streptomyces collinus
BGC0000194.1	0.21	Polyketide	actinorhodin	Streptomyces coelicolor A3(2)
BGC0001895.1	0.21	Polyketide	huanglongmycin A, huanglongmycin B, huanglongmycin C	Streptomyces sp. CB09001
BGC0000219.1	0.20	Polyketide, Saccharide	elloramycin	Streptomyces olivaceus
BGC0000221.1	0.20	Polyketide	erdacin	uncultured soil bacterium V167

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000836.1	0.81	Other	APE Ec	Escherichia coli CFT073
BGC0002008.1	0.81	Other	aryl polyenes	Xenorhabdus doucetiae
BGC0000837.1	0.62	Other	APE Vf	Aliivibrio fischeri ES114
BGC0001723.1	0.58	Polyketide	oviedomycin	Streptomyces antibioticus
BGC0000248.1	0.54	Polyketide	naphtocyclinone	Streptomyces arenae
BGC0000272.1	0.54	Polyketide	spore pigment	Streptomyces collinus
BGC0000194.1	0.53	Polyketide	actinorhodin	Streptomyces coelicolor A3(2)
BGC0001895.1	0.53	Polyketide	huanglongmycin A, huanglongmycin B, huanglongmycin C	Streptomyces sp. CB09001
BGC0000219.1	0.53	Polyketide, Saccharide	elloramycin	Streptomyces olivaceus
BGC0000221.1	0.52	Polyketide	erdacin	uncultured soil bacterium V167

Similar known gene clusters

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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c00127_NZ_JMTB.. - Region 1 - hserlactone

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Location: 16,873 - 37,517 nt. (total: 20,645 nt) Show pHMM detection rules used

hserlactone: Autoind_synth

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core biosynthetic genes

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KnownClusterBlast

Pfam domains

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001897.1	0.10	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0000329.1	0.06	NRP	corpeptin A, corpeptin B	Pseudomonas corrugata
BGC0000145.1	0.05	Polyketide	salinosporamide A	Salinispora tropica
BGC0000065.1	0.04	Polyketide	rustmicin	Streptomyces galbus
BGC0001051.1	0.04	NRP, Polyketide	thuggacin A	Sorangium cellulosum
BGC0001041.1	0.04	NRP, Polyketide	salinosporamide A	Salinispora tropica CNB-440
BGC0001732.1	0.03	Other	paulomycin	Streptomyces sp. YN86

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001897.1	0.36	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0000329.1	0.25	NRP	corpeptin A, corpeptin B	Pseudomonas corrugata
BGC0000145.1	0.21	Polyketide	salinosporamide A	Salinispora tropica
BGC0000065.1	0.20	Polyketide	rustmicin	Streptomyces galbus
BGC0001051.1	0.19	NRP, Polyketide	thuggacin A	Sorangium cellulosum
BGC0001041.1	0.18	NRP, Polyketide	salinosporamide A	Salinispora tropica CNB-440
BGC0001732.1	0.14	Other	paulomycin	Streptomyces sp. YN86

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

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