GCF_001458115.1_Gracilibacillus_massiliensis_genomic - 3 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_CZRP01000009 (original name was: NZ_CZRP01000009.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	ectoine	82,662	93,048	ectoine	Other	66%
Region 9.2	terpene	93,434	114,267	carotenoid	Terpene	33%

NZ_CZRP01000013 (original name was: NZ_CZRP01000013.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	RRE-containing,lassopeptide	800,015	825,100	paeninodin	RiPP	80%

No secondary metabolite regions were found in these records:: NZ_CZRP01000001 (original name was: NZ_CZRP01000001.1); NZ_CZRP01000002 (original name was: NZ_CZRP01000002.1); NZ_CZRP01000003 (original name was: NZ_CZRP01000003.1); NZ_CZRP01000004 (original name was: NZ_CZRP01000004.1); NZ_CZRP01000005 (original name was: NZ_CZRP01000005.1); NZ_CZRP01000006 (original name was: NZ_CZRP01000006.1); NZ_CZRP01000007 (original name was: NZ_CZRP01000007.1); NZ_CZRP01000008 (original name was: NZ_CZRP01000008.1); NZ_CZRP01000010 (original name was: NZ_CZRP01000010.1); NZ_CZRP01000011 (original name was: NZ_CZRP01000011.1); NZ_CZRP01000012 (original name was: NZ_CZRP01000012.1)

Compact view

c00009_NZ_CZRP.. - Region 1 - ectoine

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Location: 82,662 - 93,048 nt. (total: 10,387 nt) Show pHMM detection rules used

ectoine: ectoine_synt

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000858.1	0.41	Other	ectoine	Methylobacter marinus
BGC0000855.1	0.40	Other	ectoine	Methylomicrobium kenyense
BGC0000856.1	0.40	Other	ectoine	Methylophaga thalassica
BGC0000852.1	0.40	Other	ectoine	Sporosarcina pasteurii
BGC0000853.1	0.40	Other	ectoine	Streptomyces anulatus
BGC0000859.1	0.33	Other	ectoine	Methylomicrobium alcaliphilum
BGC0000857.1	0.31	Other	ectoine	Methylophaga alcalica
BGC0000860.1	0.25	Other	ectoine	Methylarcula marina
BGC0000854.1	0.25	Other	ectoine	Methylomicrobium alcaliphilum 20Z
BGC0001521.1	0.21	NRP	auriculamide	Herpetosiphon aurantiacus DSM 785

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000858.1	0.72	Other	ectoine	Methylobacter marinus
BGC0000855.1	0.72	Other	ectoine	Methylomicrobium kenyense
BGC0000856.1	0.72	Other	ectoine	Methylophaga thalassica
BGC0000852.1	0.72	Other	ectoine	Sporosarcina pasteurii
BGC0000853.1	0.72	Other	ectoine	Streptomyces anulatus
BGC0000859.1	0.67	Other	ectoine	Methylomicrobium alcaliphilum
BGC0000857.1	0.65	Other	ectoine	Methylophaga alcalica
BGC0000860.1	0.59	Other	ectoine	Methylarcula marina
BGC0000854.1	0.59	Other	ectoine	Methylomicrobium alcaliphilum 20Z
BGC0001521.1	0.53	NRP	auriculamide	Herpetosiphon aurantiacus DSM 785

Similar known gene clusters

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00009_NZ_CZRP.. - Region 2 - terpene

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Location: 93,434 - 114,267 nt. (total: 20,834 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.36	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000650.1	0.31	Terpene	carotenoid	Algoriphagus sp. KK10202C
BGC0000645.1	0.31	Terpene	carotenoid	Halobacillus halophilus DSM 2266
BGC0000644.1	0.25	Terpene	carotenoid	Dietzia sp. CQ4
BGC0000637.1	0.23	Terpene	carotenoid	Corynebacterium glutamicum
BGC0000643.1	0.22	Terpene	carotenoid	Brevundimonas vesicularis
BGC0000634.1	0.22	Terpene	carotenoid	Brevundimonas sp. SD212
BGC0000656.1	0.20	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000630.1	0.20	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0001475.1	0.18	Polyketide	aspterric acid	Aspergillus terreus NIH2624

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.69	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000650.1	0.65	Terpene	carotenoid	Algoriphagus sp. KK10202C
BGC0000645.1	0.64	Terpene	carotenoid	Halobacillus halophilus DSM 2266
BGC0000644.1	0.59	Terpene	carotenoid	Dietzia sp. CQ4
BGC0000637.1	0.56	Terpene	carotenoid	Corynebacterium glutamicum
BGC0000643.1	0.55	Terpene	carotenoid	Brevundimonas vesicularis
BGC0000634.1	0.55	Terpene	carotenoid	Brevundimonas sp. SD212
BGC0000656.1	0.52	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000630.1	0.52	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0001475.1	0.50	Polyketide	aspterric acid	Aspergillus terreus NIH2624

Similar known gene clusters

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00013_NZ_CZRP.. - Region 1 - RRE-containing,lassopeptide

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Location: 800,015 - 825,100 nt. (total: 25,086 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])
lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Lasso peptides

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001634.1	0.72	RiPP	keywimysin	Streptomyces sp. NRRL F-5702
BGC0001550.1	0.67	RiPP	citrulassin D	Streptomyces katrae
BGC0000575.1	0.62	RiPP	lariatin	Rhodococcus jostii
BGC0001655.1	0.62	RiPP	LP2006	Nocardiopsis alba DSM 43377
BGC0001176.1	0.62	RiPP	streptomonomicin	Streptomonospora alba
BGC0000571.1	0.57	RiPP	burhizin	Paraburkholderia rhizoxinica HKI 454
BGC0001645.1	0.56	RiPP	lagmysin	Streptomyces sp. NRRL S-118
BGC0001889.1	0.55	RiPP	fusilassin	Thermobifida fusca YX
BGC0001496.1	0.53	RiPP	actinokineosin	Actinokineospora spheciospongiae
BGC0001551.1	0.53	RiPP	citrulassin E	Streptomyces glaucescens

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001634.1	0.69	RiPP	keywimysin	Streptomyces sp. NRRL F-5702
BGC0001550.1	0.67	RiPP	citrulassin D	Streptomyces katrae
BGC0001655.1	0.66	RiPP	LP2006	Nocardiopsis alba DSM 43377
BGC0000575.1	0.65	RiPP	lariatin	Rhodococcus jostii
BGC0001176.1	0.64	RiPP	streptomonomicin	Streptomonospora alba
BGC0000571.1	0.62	RiPP	burhizin	Paraburkholderia rhizoxinica HKI 454
BGC0001496.1	0.62	RiPP	actinokineosin	Actinokineospora spheciospongiae
BGC0001645.1	0.61	RiPP	lagmysin	Streptomyces sp. NRRL S-118
BGC0001889.1	0.61	RiPP	fusilassin	Thermobifida fusca YX
BGC0001779.1	0.61	RiPP	siamycin	Streptomyces nodosus

Similar known gene clusters

Lasso peptide predictions

Lassopeptides - No core peptides found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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Lasso peptides

Core peptide predictions

No core peptides found.