GCF_001991075.2_ASM199107v2_genomic - 3 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_CP014204.2

Region	Type	From	To
Region 1.1	cyclic-lactone-autoinducer	1,101,447	1,119,323
Region 1.2	cyclic-lactone-autoinducer	1,270,369	1,291,172
Region 1.3	ranthipeptide	2,129,074	2,150,635

Region	Type	From	To	Similarity
Region 1.1	cyclic-lactone-autoinducer	1,101,447	1,119,323
Region 1.2	cyclic-lactone-autoinducer	1,270,369	1,291,172
Region 1.3	ranthipeptide	2,129,074	2,150,635

No secondary metabolite regions were found in these records:: NZ_CP014203.1

Compact view

NZ_CP014204.2 - Region 1 - cyclic-lactone-autoinducer

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Location: 1,101,447 - 1,119,323 nt. (total: 17,877 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000488.1	0.15	RiPP	circularin A	Clostridium beijerinckii
BGC0000433.1	0.06	NRP	surfactin	Bacillus velezensis FZB42
BGC0001598.1	0.04	NRP, Polyketide	foxicins A-D	Streptomyces diastatochromogenes

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000488.1	0.45	RiPP	circularin A	Clostridium beijerinckii
BGC0000433.1	0.24	NRP	surfactin	Bacillus velezensis FZB42
BGC0001598.1	0.19	NRP, Polyketide	foxicins A-D	Streptomyces diastatochromogenes

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP014204.2 - Region 2 - cyclic-lactone-autoinducer

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Location: 1,270,369 - 1,291,172 nt. (total: 20,804 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001586.1	0.15	Saccharide	EPS273	Pseudomonas stutzeri
BGC0001686.1	0.08	NRP	N-octanoyl-Met-Phe-H	Clostridium sp. CAG:567
BGC0001053.1	0.06	NRP, Polyketide	tubulysin A	Archangium disciforme
BGC0000042.1	0.03	Polyketide	cremimycin	Streptomyces sp. MJ635-86F5

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001586.1	0.45	Saccharide	EPS273	Pseudomonas stutzeri
BGC0001686.1	0.31	NRP	N-octanoyl-Met-Phe-H	Clostridium sp. CAG:567
BGC0001053.1	0.25	NRP, Polyketide	tubulysin A	Archangium disciforme
BGC0000042.1	0.16	Polyketide	cremimycin	Streptomyces sp. MJ635-86F5

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP014204.2 - Region 3 - ranthipeptide

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Location: 2,129,074 - 2,150,635 nt. (total: 21,562 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000640.1	0.16	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000286.1	0.16	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0000642.1	0.16	Terpene	carotenoid	Enterobacteriaceae bacterium DC413
BGC0000643.1	0.16	Terpene	carotenoid	Brevundimonas vesicularis
BGC0001654.1	0.16	Saccharide	lipooligosaccharide	Bacteroides thetaiotaomicron VPI-5482
BGC0000634.1	0.16	Terpene	carotenoid	Brevundimonas sp. SD212
BGC0001465.1	0.13	Other	bromopyrroles/bromophenols	Marinomonas mediterranea MMB-1
BGC0001917.1	0.13	Polyketide	5-alkyl-1,2,3,4-tetrahydroquinolines, streptoaminals	Streptomyces nigrescens
BGC0001080.1	0.13	Other (Phenazine)	endophenazine A, endophenazine B	Streptomyces anulatus
BGC0001078.1	0.12	Terpene, Polyketide	furaquinocin B	Streptomyces sp. KO-3988

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000640.1	0.47	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000286.1	0.47	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0000642.1	0.47	Terpene	carotenoid	Enterobacteriaceae bacterium DC413
BGC0000643.1	0.46	Terpene	carotenoid	Brevundimonas vesicularis
BGC0001654.1	0.46	Saccharide	lipooligosaccharide	Bacteroides thetaiotaomicron VPI-5482
BGC0000634.1	0.46	Terpene	carotenoid	Brevundimonas sp. SD212
BGC0001465.1	0.42	Other	bromopyrroles/bromophenols	Marinomonas mediterranea MMB-1
BGC0001917.1	0.41	Polyketide	5-alkyl-1,2,3,4-tetrahydroquinolines, streptoaminals	Streptomyces nigrescens
BGC0001080.1	0.41	Other (Phenazine)	endophenazine A, endophenazine B	Streptomyces anulatus
BGC0001078.1	0.39	Terpene, Polyketide	furaquinocin B	Streptomyces sp. KO-3988

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names