GCF_001375515.1_Rubiinfantum_massiliensis_genomic - 2 region(s)

Region	Type	From	To	Most similar known cluster	Similarity
Region 9.1	lanthipeptide-class-ii	79,117	102,101

Region

Type

From

Most similar known cluster

Similarity

Region 9.1

lanthipeptide-class-ii

79,117

102,101

Region	Type	From	To	Most similar known cluster	Similarity
Region 14.1	thiopeptide,LAP	13,705	42,737

Region

Type

From

Most similar known cluster

Similarity

Region 14.1

thiopeptide,LAP

13,705

42,737

Region	Type	From	To	Most similar known cluster	Similarity
Region 9.1	lanthipeptide-class-ii	79,117	102,101
Region 14.1	thiopeptide,LAP	13,705	42,737

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000528.1	0.32	RiPP	michiganin A	Clavibacter michiganensis subsp. michiganensis NCPPB 382
BGC0001660.1	0.27	RiPP	mathermycin	Marinactinospora thermotolerans
BGC0001364.1	0.26	RiPP	cinnamycin B	Actinomadura atramentaria DSM 43919
BGC0000516.1	0.26	RiPP	geobacillin II	Geobacillus thermodenitrificans
BGC0001210.1	0.25	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0001787.1	0.24	RiPP	suicin 3908	Streptococcus suis
BGC0000626.1	0.24	RiPP	thuricin	Bacillus thuringiensis
BGC0000523.1	0.24	RiPP	lactocin S	Lactobacillus sakei
BGC0000539.1	0.24	RiPP	nukacin ISK-1	Staphylococcus warneri
BGC0000563.1	0.23	RiPP	venezuelin	Streptomyces venezuelae ATCC 10712

Reference

lanthipeptide-class-ii

Similarity score

Type

Compound(s)

Organism

BGC0000528.1

0.32

RiPP

michiganin A

Clavibacter michiganensis subsp. michiganensis NCPPB 382

BGC0001660.1

0.27

RiPP

mathermycin

Marinactinospora thermotolerans

BGC0001364.1

0.26

RiPP

cinnamycin B

Actinomadura atramentaria DSM 43919

BGC0000516.1

0.26

RiPP

geobacillin II

Geobacillus thermodenitrificans

BGC0001210.1

0.25

RiPP

pseudomycoicidin

Bacillus pseudomycoides DSM 12442

BGC0001787.1

0.24

RiPP

suicin 3908

Streptococcus suis

BGC0000626.1

0.24

RiPP

thuricin

Bacillus thuringiensis

BGC0000523.1

0.24

RiPP

lactocin S

Lactobacillus sakei

BGC0000539.1

0.24

RiPP

nukacin ISK-1

Staphylococcus warneri

BGC0000563.1

0.23

RiPP

venezuelin

Streptomyces venezuelae ATCC 10712

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000528.1	0.65	RiPP	michiganin A	Clavibacter michiganensis subsp. michiganensis NCPPB 382
BGC0001660.1	0.60	RiPP	mathermycin	Marinactinospora thermotolerans
BGC0001364.1	0.60	RiPP	cinnamycin B	Actinomadura atramentaria DSM 43919
BGC0000516.1	0.59	RiPP	geobacillin II	Geobacillus thermodenitrificans
BGC0001210.1	0.58	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0001787.1	0.58	RiPP	suicin 3908	Streptococcus suis
BGC0000626.1	0.58	RiPP	thuricin	Bacillus thuringiensis
BGC0000523.1	0.57	RiPP	lactocin S	Lactobacillus sakei
BGC0000539.1	0.57	RiPP	nukacin ISK-1	Staphylococcus warneri
BGC0000563.1	0.57	RiPP	venezuelin	Streptomyces venezuelae ATCC 10712

Reference

Aggregated

Similarity score

Type

Compound(s)

Organism

BGC0000528.1

0.65

RiPP

michiganin A

Clavibacter michiganensis subsp. michiganensis NCPPB 382

BGC0001660.1

0.60

RiPP

mathermycin

Marinactinospora thermotolerans

BGC0001364.1

0.60

RiPP

cinnamycin B

Actinomadura atramentaria DSM 43919

BGC0000516.1

0.59

RiPP

geobacillin II

Geobacillus thermodenitrificans

BGC0001210.1

0.58

RiPP

pseudomycoicidin

Bacillus pseudomycoides DSM 12442

BGC0001787.1

0.58

RiPP

suicin 3908

Streptococcus suis

BGC0000626.1

0.58

RiPP

thuricin

Bacillus thuringiensis

BGC0000523.1

0.57

RiPP

lactocin S

Lactobacillus sakei

BGC0000539.1

0.57

RiPP

nukacin ISK-1

Staphylococcus warneri

BGC0000563.1

0.57

RiPP

venezuelin

Streptomyces venezuelae ATCC 10712

c00014_NZ_CTDX.. - Region 1 - LAP,thiopeptide

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Location: 13,705 - 42,737 nt. (total: 29,033 nt) Show pHMM detection rules used

thiopeptide: ((YcaO or TIGR03882) and ((thio_amide and (PF06968 or PF04055 or PF07366)) or Lant_dehydr_C or Lant_dehydr_N or PF07366 or PF06968 or PF04055) or thiostrepton)
LAP: ((((goadsporin_like or PF00881 or TIGR03605) and (YcaO or TIGR03882 or TIGR03604)) or TIGR03603 or TIGR03602) and not cyanobactin_synth)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

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Reference	Similarity score	Type	Compound(s)	Organism
BGC0001184.1	0.56	Other	bacilysin	Bacillus velezensis FZB42
BGC0000888.1	0.55	Other	bacilysin	Bacillus sp. CS93
BGC0000569.1	0.47	RiPP	plantazolicin	Bacillus velezensis FZB42
BGC0002013.1	0.46	RiPP	curacozole	Streptomyces curacoi
BGC0001171.1	0.46	RiPP	listeriolysin S	Listeria monocytogenes serotype 4b str. F2365
BGC0000507.1	0.45	RiPP	epicidin	Staphylococcus epidermidis
BGC0001170.1	0.42	RiPP	clostridiolysin S	Clostridium sporogenes ATCC 15579
BGC0000564.1	0.42	RiPP	clostridiolysin S	Clostridium botulinum A str. ATCC 3502
BGC0000543.1	0.42	RiPP	pep5	Staphylococcus epidermidis
BGC0000565.1	0.42	RiPP	goadsporin	Streptomyces sp. TP-A0584

Reference

thiopeptide

LAP

Similarity score

Type

Compound(s)

Organism

BGC0001184.1

0.56

Other

bacilysin

Bacillus velezensis FZB42

BGC0000888.1

0.55

Other

bacilysin

Bacillus sp. CS93

BGC0000569.1

0.47

RiPP

plantazolicin

Bacillus velezensis FZB42

BGC0002013.1

0.46

RiPP

curacozole

Streptomyces curacoi

BGC0001171.1

0.46

RiPP

listeriolysin S

Listeria monocytogenes serotype 4b str. F2365

BGC0000507.1

0.45

RiPP

epicidin

Staphylococcus epidermidis

BGC0001170.1

0.42

RiPP

clostridiolysin S

Clostridium sporogenes ATCC 15579

BGC0000564.1

0.42

RiPP

clostridiolysin S

Clostridium botulinum A str. ATCC 3502

BGC0000543.1

0.42

RiPP

pep5

Staphylococcus epidermidis

BGC0000565.1

0.42

RiPP

goadsporin

Streptomyces sp. TP-A0584

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001184.1	0.61	Other	bacilysin	Bacillus velezensis FZB42
BGC0000888.1	0.61	Other	bacilysin	Bacillus sp. CS93
BGC0000569.1	0.57	RiPP	plantazolicin	Bacillus velezensis FZB42
BGC0002013.1	0.56	RiPP	curacozole	Streptomyces curacoi
BGC0001171.1	0.56	RiPP	listeriolysin S	Listeria monocytogenes serotype 4b str. F2365
BGC0000507.1	0.56	RiPP	epicidin	Staphylococcus epidermidis
BGC0001170.1	0.54	RiPP	clostridiolysin S	Clostridium sporogenes ATCC 15579
BGC0000543.1	0.54	RiPP	pep5	Staphylococcus epidermidis
BGC0000564.1	0.54	RiPP	clostridiolysin S	Clostridium botulinum A str. ATCC 3502
BGC0000565.1	0.54	RiPP	goadsporin	Streptomyces sp. TP-A0584

Reference

Aggregated

Similarity score

Type

Compound(s)

Organism

BGC0001184.1

0.61

Other

bacilysin

Bacillus velezensis FZB42

BGC0000888.1