GCF_000308295.2_Ab_34632_genomic - 4 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_HG326652.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	terpene	1,016,826	1,036,958
Region 1.2	redox-cofactor	1,641,773	1,664,050
Region 1.3	terpene	1,986,005	2,010,984	malleobactin A / malleobactin B / malleobactin C / malleobactin D	NRP:NRP siderophore	11%

NZ_HG326656.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	hserlactone	23,928	44,551

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	terpene	1,016,826	1,036,958
Region 1.2	redox-cofactor	1,641,773	1,664,050
Region 1.3	terpene	1,986,005	2,010,984	malleobactin A / malleobactin B / malleobactin C / malleobactin D	NRP:NRP siderophore	11%
Region 5.1	hserlactone	23,928	44,551

No secondary metabolite regions were found in these records:: NZ_HG326653.1; NZ_HG326654.1; NZ_HG326655.1

Compact view

NZ_HG326652.1 - Region 1 - terpene

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Location: 1,016,826 - 1,036,958 nt. (total: 20,133 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000792.1	0.16	Saccharide	polysaccharide	Enterococcus faecalis OG1RF
BGC0000698.1	0.14	Saccharide	hygromycin A	Streptomyces hygroscopicus
BGC0000703.1	0.14	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0001521.1	0.14	NRP	auriculamide	Herpetosiphon aurantiacus DSM 785
BGC0001440.1	0.09	Other	cystargolide A, cystargolide B	Kitasatospora cystarginea
BGC0000264.1	0.07	Polyketide	resistomycin, resistoflavine	Streptomyces resistomycificus
BGC0001902.1	0.06	NRP, Polyketide	bengamide	Myxococcus virescens
BGC0000652.1	0.06	Terpene	napyradiomycin	Streptomyces sp. CNQ525
BGC0001079.1	0.06	Polyketide, Terpene	napyradiomycin A80915C	Streptomyces aculeolatus
BGC0001154.1	0.06	Other	cacibiocin B	Catenulispora acidiphila DSM 44928

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000792.1	0.46	Saccharide	polysaccharide	Enterococcus faecalis OG1RF
BGC0000698.1	0.44	Saccharide	hygromycin A	Streptomyces hygroscopicus
BGC0000703.1	0.44	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0001521.1	0.44	NRP	auriculamide	Herpetosiphon aurantiacus DSM 785
BGC0001440.1	0.33	Other	cystargolide A, cystargolide B	Kitasatospora cystarginea
BGC0000264.1	0.28	Polyketide	resistomycin, resistoflavine	Streptomyces resistomycificus
BGC0001902.1	0.25	NRP, Polyketide	bengamide	Myxococcus virescens
BGC0000652.1	0.25	Terpene	napyradiomycin	Streptomyces sp. CNQ525
BGC0001079.1	0.25	Polyketide, Terpene	napyradiomycin A80915C	Streptomyces aculeolatus
BGC0001154.1	0.24	Other	cacibiocin B	Catenulispora acidiphila DSM 44928

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_HG326652.1 - Region 2 - redox-cofactor

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Location: 1,641,773 - 1,664,050 nt. (total: 22,278 nt) Show pHMM detection rules used

redox-cofactor: (cds(PF04055 and (TIGR04085 or SPASM)) and (TIGR02111 or TIGR03966) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001645.1	0.25	RiPP	lagmysin	Streptomyces sp. NRRL S-118
BGC0001634.1	0.23	RiPP	keywimysin	Streptomyces sp. NRRL F-5702
BGC0000575.1	0.23	RiPP	lariatin	Rhodococcus jostii
BGC0001889.1	0.22	RiPP	fusilassin	Thermobifida fusca YX
BGC0001356.1	0.22	RiPP	paeninodin	Paenibacillus dendritiformis C454
BGC0001496.1	0.21	RiPP	actinokineosin	Actinokineospora spheciospongiae
BGC0000928.1	0.18	Other	T3 toxin	Cylindrospermopsis raciborskii T3
BGC0000188.1	0.18	Alkaloid	saxitoxin, neosaxitoxin, decarbamoylsaxitoxin, gonyautoxin 3, gonyautoxin 2	Cylindrospermopsis raciborskii T3
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001188.1	0.16	RiPP	legonaridin	Streptomyces sp. CT34

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001645.1	0.58	RiPP	lagmysin	Streptomyces sp. NRRL S-118
BGC0001634.1	0.56	RiPP	keywimysin	Streptomyces sp. NRRL F-5702
BGC0000575.1	0.56	RiPP	lariatin	Rhodococcus jostii
BGC0001889.1	0.55	RiPP	fusilassin	Thermobifida fusca YX
BGC0001356.1	0.54	RiPP	paeninodin	Paenibacillus dendritiformis C454
BGC0001496.1	0.53	RiPP	actinokineosin	Actinokineospora spheciospongiae
BGC0000928.1	0.49	Other	T3 toxin	Cylindrospermopsis raciborskii T3
BGC0000188.1	0.49	Alkaloid	saxitoxin, neosaxitoxin, decarbamoylsaxitoxin, gonyautoxin 3, gonyautoxin 2	Cylindrospermopsis raciborskii T3
BGC0000554.1	0.47	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001188.1	0.47	RiPP	legonaridin	Streptomyces sp. CT34

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

NZ_HG326652.1 - Region 3 - terpene

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Location: 1,986,005 - 2,010,984 nt. (total: 24,980 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000648.1	0.32	Terpene	carotenoid	Myxococcus xanthus
BGC0000669.1	0.31	Terpene	marneral	Arabidopsis thaliana
BGC0001361.1	0.28	Terpene	sodorifen	Serratia plymuthica 4Rx13
BGC0001594.1	0.25	Alkaloid	fischerindole L	Fischerella muscicola UTEX 1829
BGC0000853.1	0.24	Other	ectoine	Streptomyces anulatus
BGC0000646.1	0.24	Terpene	β-carotein	uncultured bacterium
BGC0000656.1	0.24	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000630.1	0.24	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000859.1	0.24	Other	ectoine	Methylomicrobium alcaliphilum
BGC0000856.1	0.23	Other	ectoine	Methylophaga thalassica

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000648.1	0.66	Terpene	carotenoid	Myxococcus xanthus
BGC0000669.1	0.64	Terpene	marneral	Arabidopsis thaliana
BGC0001361.1	0.61	Terpene	sodorifen	Serratia plymuthica 4Rx13
BGC0001594.1	0.58	Alkaloid	fischerindole L	Fischerella muscicola UTEX 1829
BGC0000853.1	0.57	Other	ectoine	Streptomyces anulatus
BGC0000646.1	0.57	Terpene	β-carotein	uncultured bacterium
BGC0000656.1	0.57	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000630.1	0.57	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000859.1	0.57	Other	ectoine	Methylomicrobium alcaliphilum
BGC0000856.1	0.57	Other	ectoine	Methylophaga thalassica

Similar known gene clusters

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

NZ_HG326656.1 - Region 1 - hserlactone

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Location: 23,928 - 44,551 nt. (total: 20,624 nt) Show pHMM detection rules used

hserlactone: Autoind_synth

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000761.1	0.16	Saccharide	exopolysaccharide	Methylobacillus sp. 12S
BGC0000703.1	0.13	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0001897.1	0.09	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0000498.1	0.05	RiPP	bovicin HJ50	Streptococcus equinus
BGC0001437.1	0.04	NRP	obafluorin	Pseudomonas fluorescens
BGC0001710.1	0.04	NRP	obafluorin	Pseudomonas fluorescens

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000761.1	0.47	Saccharide	exopolysaccharide	Methylobacillus sp. 12S
BGC0000703.1	0.42	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0001897.1	0.33	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0000498.1	0.21	RiPP	bovicin HJ50	Streptococcus equinus
BGC0001437.1	0.20	NRP	obafluorin	Pseudomonas fluorescens
BGC0001710.1	0.20	NRP	obafluorin	Pseudomonas fluorescens

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names