GCF_000750635.1_PRJEB5524_assembly_1_genomic - 4 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_CCDM010000002 (original name was: NZ_CCDM010000002.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	terpene	65,525	87,402	lichenysin	NRP	35%
Region 2.2	T3PKS	458,200	499,369

NZ_CCDM010000004 (original name was: NZ_CCDM010000004.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	ectoine	121,254	131,640	ectoine	Other	66%

NZ_CCDM010000005 (original name was: NZ_CCDM010000005.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	terpene	210,641	231,462

No secondary metabolite regions were found in these records:: NZ_CCDM010000001 (original name was: NZ_CCDM010000001.1); NZ_CCDM010000003 (original name was: NZ_CCDM010000003.1); NZ_CCDM010000006 (original name was: NZ_CCDM010000006.1); NZ_CCDM010000007 (original name was: NZ_CCDM010000007.1); NZ_CCDM010000008 (original name was: NZ_CCDM010000008.1); NZ_CCDM010000009 (original name was: NZ_CCDM010000009.1); NZ_CCDM010000010 (original name was: NZ_CCDM010000010.1); NZ_CCDM010000011 (original name was: NZ_CCDM010000011.1); NZ_CCDM010000012 (original name was: NZ_CCDM010000012.1)

Compact view

c00002_NZ_CCDM.. - Region 1 - terpene

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Location: 65,525 - 87,402 nt. (total: 21,878 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000487.1	0.16	RiPP	carnocyclin	Carnobacterium maltaromaticum
BGC0000563.1	0.16	RiPP	venezuelin	Streptomyces venezuelae ATCC 10712
BGC0000513.1	0.16	RiPP	Ery-9, Ery-6, Ery-8, Ery-7, Ery-5, Ery-4, Ery-3	Saccharopolyspora erythraea NRRL 2338
BGC0001639.1	0.16	RiPP	klebsidin	Klebsiella pneumoniae
BGC0001210.1	0.16	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0001861.1	0.16	RiPP	bacillicin BAG2O	Bacillus cereus BAG2O-1
BGC0000500.1	0.16	RiPP	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum
BGC0000539.1	0.16	RiPP	nukacin ISK-1	Staphylococcus warneri
BGC0000501.1	0.15	RiPP	catenulipeptin	Catenulispora acidiphila DSM 44928

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000554.1	0.47	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000487.1	0.47	RiPP	carnocyclin	Carnobacterium maltaromaticum
BGC0000563.1	0.47	RiPP	venezuelin	Streptomyces venezuelae ATCC 10712
BGC0000513.1	0.47	RiPP	Ery-9, Ery-6, Ery-8, Ery-7, Ery-5, Ery-4, Ery-3	Saccharopolyspora erythraea NRRL 2338
BGC0001639.1	0.46	RiPP	klebsidin	Klebsiella pneumoniae
BGC0001210.1	0.46	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0001861.1	0.46	RiPP	bacillicin BAG2O	Bacillus cereus BAG2O-1
BGC0000500.1	0.46	RiPP	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum
BGC0000539.1	0.46	RiPP	nukacin ISK-1	Staphylococcus warneri
BGC0000501.1	0.46	RiPP	catenulipeptin	Catenulispora acidiphila DSM 44928

Similar known gene clusters

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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c00002_NZ_CCDM.. - Region 2 - T3PKS

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Location: 458,200 - 499,369 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

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transport-related genes

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000286.1	0.20	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0000205.1	0.16	Polyketide	bryostatin	Candidatus Endobugula sertula
BGC0001120.1	0.15	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0001925.1	0.14	Alkaloid	altemicidin, SB-203207, SB-203208	Streptomyces sp.
BGC0001080.1	0.13	Other (Phenazine)	endophenazine A, endophenazine B	Streptomyces anulatus
BGC0000934.1	0.13	Other (Phenazine)	5-acetyl-5,10-dihydrophenazine-1-carboxylic acid, 5-(2-hydroxyacetyl)-5,10-dihydrophenazine-1-carboxylic acid, endophenazine A1, endophenazine F, endophenazine G	Kitasatospora sp. HKI 714
BGC0000313.1	0.11	NRP	beauvericin	Beauveria bassiana
BGC0001076.1	0.10	Other (Nucleoside)	liposidomycin B, liposidomycin A, liposidomycin C, liposidomycin Z, liposidomycin H, liposidomycin G, liposidomycin L, liposidomycin M, liposidomycin K, liposidomycin N	Streptomyces sp. SN-1061M
BGC0000679.1	0.10	Terpene	diazepinomicin	Micromonospora sp. M42
BGC0000872.1	0.09	Other	A-90289 A, A-90289 B	Streptomyces sp. SANK 60405

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000286.1	0.52	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0000205.1	0.47	Polyketide	bryostatin	Candidatus Endobugula sertula
BGC0001120.1	0.45	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0001925.1	0.43	Alkaloid	altemicidin, SB-203207, SB-203208	Streptomyces sp.
BGC0001080.1	0.41	Other (Phenazine)	endophenazine A, endophenazine B	Streptomyces anulatus
BGC0000934.1	0.41	Other (Phenazine)	5-acetyl-5,10-dihydrophenazine-1-carboxylic acid, 5-(2-hydroxyacetyl)-5,10-dihydrophenazine-1-carboxylic acid, endophenazine A1, endophenazine F, endophenazine G	Kitasatospora sp. HKI 714
BGC0000313.1	0.37	NRP	beauvericin	Beauveria bassiana
BGC0001076.1	0.35	Other (Nucleoside)	liposidomycin B, liposidomycin A, liposidomycin C, liposidomycin Z, liposidomycin H, liposidomycin G, liposidomycin L, liposidomycin M, liposidomycin K, liposidomycin N	Streptomyces sp. SN-1061M
BGC0000679.1	0.35	Terpene	diazepinomicin	Micromonospora sp. M42
BGC0000872.1	0.34	Other	A-90289 A, A-90289 B	Streptomyces sp. SANK 60405

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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c00004_NZ_CCDM.. - Region 1 - ectoine

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Location: 121,254 - 131,640 nt. (total: 10,387 nt) Show pHMM detection rules used

ectoine: ectoine_synt

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000859.1	0.41	Other	ectoine	Methylomicrobium alcaliphilum
BGC0000855.1	0.41	Other	ectoine	Methylomicrobium kenyense
BGC0000853.1	0.41	Other	ectoine	Streptomyces anulatus
BGC0000858.1	0.41	Other	ectoine	Methylobacter marinus
BGC0000856.1	0.40	Other	ectoine	Methylophaga thalassica
BGC0000852.1	0.39	Other	ectoine	Sporosarcina pasteurii
BGC0000857.1	0.31	Other	ectoine	Methylophaga alcalica
BGC0000854.1	0.29	Other	ectoine	Methylomicrobium alcaliphilum 20Z
BGC0000860.1	0.25	Other	ectoine	Methylarcula marina
BGC0001987.1	0.14	Polyketide	koreenceine A, koreenceine B, koreenceine C, koreenceine D	Pseudomonas koreensis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000859.1	0.73	Other	ectoine	Methylomicrobium alcaliphilum
BGC0000855.1	0.72	Other	ectoine	Methylomicrobium kenyense
BGC0000853.1	0.72	Other	ectoine	Streptomyces anulatus
BGC0000858.1	0.72	Other	ectoine	Methylobacter marinus
BGC0000856.1	0.72	Other	ectoine	Methylophaga thalassica
BGC0000852.1	0.71	Other	ectoine	Sporosarcina pasteurii
BGC0000857.1	0.64	Other	ectoine	Methylophaga alcalica
BGC0000854.1	0.62	Other	ectoine	Methylomicrobium alcaliphilum 20Z
BGC0000860.1	0.59	Other	ectoine	Methylarcula marina
BGC0001987.1	0.44	Polyketide	koreenceine A, koreenceine B, koreenceine C, koreenceine D	Pseudomonas koreensis

Similar known gene clusters

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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c00005_NZ_CCDM.. - Region 1 - terpene

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Location: 210,641 - 231,462 nt. (total: 20,822 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001839.1	0.32	Terpene	squalestatin S1	Aspergillus sp. Z5
BGC0001579.1	0.17	RiPP	duramycin	Streptomyces cinnamoneus
BGC0001779.1	0.17	RiPP	siamycin	Streptomyces nodosus
BGC0000616.1	0.16	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0000521.1	0.16	RiPP	lacticin 481	Lactococcus lactis subsp. lactis
BGC0001210.1	0.16	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0000563.1	0.16	RiPP	venezuelin	Streptomyces venezuelae ATCC 10712
BGC0000539.1	0.16	RiPP	nukacin ISK-1	Staphylococcus warneri
BGC0000487.1	0.16	RiPP	carnocyclin	Carnobacterium maltaromaticum
BGC0000504.1	0.16	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001839.1	0.65	Terpene	squalestatin S1	Aspergillus sp. Z5
BGC0001579.1	0.48	RiPP	duramycin	Streptomyces cinnamoneus
BGC0001779.1	0.48	RiPP	siamycin	Streptomyces nodosus
BGC0000616.1	0.47	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0000521.1	0.47	RiPP	lacticin 481	Lactococcus lactis subsp. lactis
BGC0001210.1	0.47	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0000563.1	0.47	RiPP	venezuelin	Streptomyces venezuelae ATCC 10712
BGC0000539.1	0.47	RiPP	nukacin ISK-1	Staphylococcus warneri
BGC0000487.1	0.46	RiPP	carnocyclin	Carnobacterium maltaromaticum
BGC0000504.1	0.46	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names