GCF_000416985.1_23.k55_genomic - 4 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_ATDL01000001 (original name was: NZ_ATDL01000001.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	terpene	1	18,545	carotenoid	Terpene	28%

NZ_ATDL01000004 (original name was: NZ_ATDL01000004.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	furan	361,791	382,813

NZ_ATDL01000010 (original name was: NZ_ATDL01000010.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	betalactone	39,735	65,435

NZ_ATDL01000016 (original name was: NZ_ATDL01000016.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 15.1	arylpolyene,resorcinol	161,062	213,421	flexirubin	Polyketide	66%

No secondary metabolite regions were found in these records:: NZ_ATDL01000002 (original name was: NZ_ATDL01000002.1); NZ_ATDL01000003 (original name was: NZ_ATDL01000003.1); NZ_ATDL01000005 (original name was: NZ_ATDL01000005.1); NZ_ATDL01000006 (original name was: NZ_ATDL01000006.1); NZ_ATDL01000007 (original name was: NZ_ATDL01000007.1); NZ_ATDL01000008 (original name was: NZ_ATDL01000008.1); NZ_ATDL01000009 (original name was: NZ_ATDL01000009.1); NZ_ATDL01000011 (original name was: NZ_ATDL01000011.1); NZ_ATDL01000012 (original name was: NZ_ATDL01000012.1); NZ_ATDL01000014 (original name was: NZ_ATDL01000014.1); NZ_ATDL01000015 (original name was: NZ_ATDL01000015.1); NZ_ATDL01000017 (original name was: NZ_ATDL01000017.1); NZ_ATDL01000018 (original name was: NZ_ATDL01000018.1); NZ_ATDL01000019 (original name was: NZ_ATDL01000019.1); NZ_ATDL01000020 (original name was: NZ_ATDL01000020.1); NZ_ATDL01000021 (original name was: NZ_ATDL01000021.1); NZ_ATDL01000022 (original name was: NZ_ATDL01000022.1); NZ_ATDL01000023 (original name was: NZ_ATDL01000023.1)

Compact view

c00001_NZ_ATDL.. - Region 1 - terpene

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Location: 1 - 18,545 nt. (total: 18,545 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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additional biosynthetic genes

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000650.1	0.25	Terpene	carotenoid	Algoriphagus sp. KK10202C
BGC0000656.1	0.18	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000634.1	0.16	Terpene	carotenoid	Brevundimonas sp. SD212
BGC0000643.1	0.16	Terpene	carotenoid	Brevundimonas vesicularis
BGC0000637.1	0.15	Terpene	carotenoid	Corynebacterium glutamicum
BGC0000630.1	0.15	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000646.1	0.14	Terpene	β-carotein	uncultured bacterium
BGC0000640.1	0.14	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0001227.1	0.13	Terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0000645.1	0.13	Terpene	carotenoid	Halobacillus halophilus DSM 2266

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000650.1	0.58	Terpene	carotenoid	Algoriphagus sp. KK10202C
BGC0000656.1	0.49	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000634.1	0.46	Terpene	carotenoid	Brevundimonas sp. SD212
BGC0000643.1	0.46	Terpene	carotenoid	Brevundimonas vesicularis
BGC0000637.1	0.45	Terpene	carotenoid	Corynebacterium glutamicum
BGC0000630.1	0.44	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000646.1	0.43	Terpene	β-carotein	uncultured bacterium
BGC0000640.1	0.43	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0001227.1	0.42	Terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0000645.1	0.42	Terpene	carotenoid	Halobacillus halophilus DSM 2266

Similar known gene clusters

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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c00004_NZ_ATDL.. - Region 1 - furan

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Location: 361,791 - 382,813 nt. (total: 21,023 nt) Show pHMM detection rules used

furan: (mmyO or AvrD)

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KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	furan	Similarity score	Type	Compound(s)	Organism
BGC0000914.1		0.05	Other	methylenomycin A	Streptomyces coelicolor A3(2)

Reference	Aggregated	Similarity score	Type	Compound(s)	Organism
BGC0000914.1		0.24	Other	methylenomycin A	Streptomyces coelicolor A3(2)

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00010_NZ_ATDL.. - Region 1 - betalactone

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Location: 39,735 - 65,435 nt. (total: 25,701 nt) Show pHMM detection rules used

betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001361.1	0.26	Terpene	sodorifen	Serratia plymuthica 4Rx13
BGC0001778.1	0.24	Other	showdomycin	Streptomyces showdoensis
BGC0001594.1	0.20	Alkaloid	fischerindole L	Fischerella muscicola UTEX 1829
BGC0000668.1	0.19	Terpene, Alkaloid	12-epi-hapalindole C isonitrile, 12-epi-hapalindole E, 12-epi-fischerindole U isonitrile, fischerindole L, 12-epi-fischerindole I isonitrile, welwitindolinone A isonitrile, welwitindolinone B isothiocyanate, welwitindolinone C isothiocyanate, N-methylwelwitindolinone C isothiocyanate, N-methylwelwitinsolinone C isonitrile, 3-epi-welwitindolinone B isothiocyanate, 3-(Z-2'-isocyanoethenyl)-indole	Hapalosiphon welwitschii UTEX B 1830
BGC0001501.1	0.18	Alkaloid	ambiguine P	Fischerella sp. TAU
BGC0000258.1	0.17	Polyketide	prodigiosin	Serratia sp.
BGC0001664.1	0.17	Terpene	merosterol	Scytonema sp. PCC 10023
BGC0001595.1	0.17	Alkaloid	fischerindole	Fischerella sp. SAG 46.79
BGC0001126.1	0.17	Terpene, Alkaloid	12-epi-hapalindole J isonitrile, ambiguine A isonitrile, ambiguine B isonitrile, ambiguine C isonitrile, ambiguine D isonitrile, ambiguine E isonitrile, ambiguine K isonitrile, ambiguine L isonitrile, ambiguine I isonitrile, ambiguine J isonitrile	Fischerella ambigua UTEX 1903
BGC0001612.1	0.17	Alkaloid	ambiguine H isonitrile	Fischerella ambigua UTEX 1903

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001361.1	0.60	Terpene	sodorifen	Serratia plymuthica 4Rx13
BGC0001778.1	0.57	Other	showdomycin	Streptomyces showdoensis
BGC0001594.1	0.52	Alkaloid	fischerindole L	Fischerella muscicola UTEX 1829
BGC0000668.1	0.51	Terpene, Alkaloid	12-epi-hapalindole C isonitrile, 12-epi-hapalindole E, 12-epi-fischerindole U isonitrile, fischerindole L, 12-epi-fischerindole I isonitrile, welwitindolinone A isonitrile, welwitindolinone B isothiocyanate, welwitindolinone C isothiocyanate, N-methylwelwitindolinone C isothiocyanate, N-methylwelwitinsolinone C isonitrile, 3-epi-welwitindolinone B isothiocyanate, 3-(Z-2'-isocyanoethenyl)-indole	Hapalosiphon welwitschii UTEX B 1830
BGC0001501.1	0.49	Alkaloid	ambiguine P	Fischerella sp. TAU
BGC0000258.1	0.49	Polyketide	prodigiosin	Serratia sp.
BGC0001664.1	0.49	Terpene	merosterol	Scytonema sp. PCC 10023
BGC0001595.1	0.48	Alkaloid	fischerindole	Fischerella sp. SAG 46.79
BGC0001126.1	0.48	Terpene, Alkaloid	12-epi-hapalindole J isonitrile, ambiguine A isonitrile, ambiguine B isonitrile, ambiguine C isonitrile, ambiguine D isonitrile, ambiguine E isonitrile, ambiguine K isonitrile, ambiguine L isonitrile, ambiguine I isonitrile, ambiguine J isonitrile	Fischerella ambigua UTEX 1903
BGC0001612.1	0.48	Alkaloid	ambiguine H isonitrile	Fischerella ambigua UTEX 1903

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00015_NZ_ATDL.. - Region 1 - arylpolyene,resorcinol

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Location: 161,062 - 213,421 nt. (total: 52,360 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)
resorcinol: DarB

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000838.1	0.69	Polyketide	flexirubin	Flavobacterium johnsoniae UW101
BGC0000839.1	0.51	Other	flexirubin	Chitinophaga pinensis DSM 2588
BGC0001366.1	0.46	Polyketide	BE-24566B, zunyimycin A	Streptomyces sp. FJS31-2
BGC0001197.1	0.45	Polyketide	frankiamicin	Frankia sp. EAN1pec
BGC0000204.1	0.43	Polyketide	benastatin A, benastatin B, BE-43767, TAN1532B	Streptomyces sp. A2991200
BGC0001184.1	0.43	Other	bacilysin	Bacillus velezensis FZB42
BGC0000888.1	0.43	Other	bacilysin	Bacillus sp. CS93
BGC0000219.1	0.41	Polyketide, Saccharide	elloramycin	Streptomyces olivaceus
BGC0001512.1	0.40	Polyketide	BE-24566B	Streptomyces sp.
BGC0000235.1	0.39	Polyketide	kiamycin	Streptomyces sp. W007

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000838.1	0.69	Polyketide	flexirubin	Flavobacterium johnsoniae UW101
BGC0000839.1	0.61	Other	flexirubin	Chitinophaga pinensis DSM 2588
BGC0001366.1	0.56	Polyketide	BE-24566B, zunyimycin A	Streptomyces sp. FJS31-2
BGC0001197.1	0.56	Polyketide	frankiamicin	Frankia sp. EAN1pec
BGC0000204.1	0.55	Polyketide	benastatin A, benastatin B, BE-43767, TAN1532B	Streptomyces sp. A2991200
BGC0000197.1	0.54	Polyketide, Saccharide	aranciamycin	Streptomyces echinatus
BGC0001184.1	0.54	Other	bacilysin	Bacillus velezensis FZB42
BGC0001897.1	0.54	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0000888.1	0.54	Other	bacilysin	Bacillus sp. CS93
BGC0001512.1	0.54	Polyketide	BE-24566B	Streptomyces sp.

Similar known gene clusters

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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