GCF_020463755.1_ASM2046375v1_genomic - 4 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_CP059048.1

Region	Type	From	To
Region 1	RaS-RiPP	32,546	52,780
Region 2	betalactone	550,967	583,497
Region 3	T3PKS	1,600,965	1,642,119
Region 4	RaS-RiPP	2,289,062	2,315,529

NZ_CP059048.1 - Region 1 - RaS-RiPP

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Location: 32,546 - 52,780 nt. (total: 20,235 nt) Show pHMM detection rules used

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001534.1	0.19	Other	branched-chain fatty acids	Streptomyces filamentosus
BGC0001929.1	0.19	RiPP	WGK	Streptococcus ferus
BGC0001535.1	0.17	Other	branched-chain fatty acids	Streptomyces filamentosus
BGC0001229.1	0.17	RiPP	SBI-06990 A1, SBI-06989 A2	Streptomyces bingchenggensis BCW-1
BGC0000497.1	0.17	RiPP	BHT-Aα, BHT-Aβ	Streptococcus ratti
BGC0001618.1	0.16	RiPP	hyicin 3682	Staphylococcus hyicus
BGC0000518.1	0.16	RiPP	informatipeptin	Streptomyces viridochromogenes DSM 40736
BGC0001863.1	0.15	RiPP, Terpene	bacillicn CER074	Bacillus mycoides
BGC0000590.1	0.15	RiPP	microcin N	Escherichia coli
BGC0000586.1	0.15	RiPP	microcin E492	Klebsiella pneumoniae RYC492

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001534.1	0.51	Other	branched-chain fatty acids	Streptomyces filamentosus
BGC0001929.1	0.51	RiPP	WGK	Streptococcus ferus
BGC0001535.1	0.48	Other	branched-chain fatty acids	Streptomyces filamentosus
BGC0001229.1	0.48	RiPP	SBI-06990 A1, SBI-06989 A2	Streptomyces bingchenggensis BCW-1
BGC0000497.1	0.48	RiPP	BHT-Aα, BHT-Aβ	Streptococcus ratti
BGC0001618.1	0.46	RiPP	hyicin 3682	Staphylococcus hyicus
BGC0000518.1	0.46	RiPP	informatipeptin	Streptomyces viridochromogenes DSM 40736
BGC0001863.1	0.45	RiPP, Terpene	bacillicn CER074	Bacillus mycoides
BGC0000590.1	0.45	RiPP	microcin N	Escherichia coli
BGC0000586.1	0.45	RiPP	microcin E492	Klebsiella pneumoniae RYC492

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP059048.1 - Region 2 - betalactone

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Location: 550,967 - 583,497 nt. (total: 32,531 nt) Show pHMM detection rules used

betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001521.1	0.17	NRP	auriculamide	Herpetosiphon aurantiacus DSM 785
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001579.1	0.16	RiPP	duramycin	Streptomyces cinnamoneus
BGC0000501.1	0.16	RiPP	catenulipeptin	Catenulispora acidiphila DSM 44928
BGC0000617.1	0.15	RiPP	coagulin	Bacillus coagulans
BGC0000558.1	0.15	RiPP	sublancin 168	Bacillus subtilis subsp. subtilis str. 168
BGC0000571.1	0.15	RiPP	burhizin	Paraburkholderia rhizoxinica HKI 454
BGC0001494.1	0.15	RiPP	acinetodin	Acinetobacter gyllenbergii CIP 110306
BGC0001850.1	0.15	Other (Shikimate-derived)	diazaquinomycin A, diazaquinomycin E, diazaquinomycin F, diazaquinomycin G	Streptomyces sp. F001
BGC0001965.1	0.15	Other	nybomycin	Streptomyces albus subsp. chlorinus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001521.1	0.48	NRP	auriculamide	Herpetosiphon aurantiacus DSM 785
BGC0000554.1	0.47	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001579.1	0.46	RiPP	duramycin	Streptomyces cinnamoneus
BGC0000501.1	0.46	RiPP	catenulipeptin	Catenulispora acidiphila DSM 44928
BGC0000617.1	0.46	RiPP	coagulin	Bacillus coagulans
BGC0000558.1	0.46	RiPP	sublancin 168	Bacillus subtilis subsp. subtilis str. 168
BGC0000571.1	0.45	RiPP	burhizin	Paraburkholderia rhizoxinica HKI 454
BGC0001494.1	0.45	RiPP	acinetodin	Acinetobacter gyllenbergii CIP 110306
BGC0001850.1	0.44	Other (Shikimate-derived)	diazaquinomycin A, diazaquinomycin E, diazaquinomycin F, diazaquinomycin G	Streptomyces sp. F001
BGC0001965.1	0.44	Other	nybomycin	Streptomyces albus subsp. chlorinus

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP059048.1 - Region 3 - T3PKS

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Location: 1,600,965 - 1,642,119 nt. (total: 41,155 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000286.1	0.23	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0000764.1	0.20	Saccharide	exopolysaccharide	Lactococcus lactis
BGC0000867.1	0.18	Other	polyhydroxyalkanoic acids	Ectothiorhodospira shaposhnikovii
BGC0000866.1	0.17	Other	polyhydroxyalkanoate	Burkholderia sp. DSM 9242
BGC0001120.1	0.16	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0001080.1	0.14	Other (Phenazine)	endophenazine A, endophenazine B	Streptomyces anulatus
BGC0001076.1	0.14	Other (Nucleoside)	liposidomycin B, liposidomycin A, liposidomycin C, liposidomycin Z, liposidomycin H, liposidomycin G, liposidomycin L, liposidomycin M, liposidomycin K, liposidomycin N	Streptomyces sp. SN-1061M
BGC0000934.1	0.14	Other (Phenazine)	5-acetyl-5,10-dihydrophenazine-1-carboxylic acid, 5-(2-hydroxyacetyl)-5,10-dihydrophenazine-1-carboxylic acid, endophenazine A1, endophenazine F, endophenazine G	Kitasatospora sp. HKI 714
BGC0000872.1	0.14	Other	A-90289 A, A-90289 B	Streptomyces sp. SANK 60405
BGC0001078.1	0.13	Terpene, Polyketide	furaquinocin B	Streptomyces sp. KO-3988

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000286.1	0.56	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0000764.1	0.52	Saccharide	exopolysaccharide	Lactococcus lactis
BGC0000867.1	0.49	Other	polyhydroxyalkanoic acids	Ectothiorhodospira shaposhnikovii
BGC0000866.1	0.48	Other	polyhydroxyalkanoate	Burkholderia sp. DSM 9242
BGC0001120.1	0.47	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0001080.1	0.44	Other (Phenazine)	endophenazine A, endophenazine B	Streptomyces anulatus
BGC0001076.1	0.43	Other (Nucleoside)	liposidomycin B, liposidomycin A, liposidomycin C, liposidomycin Z, liposidomycin H, liposidomycin G, liposidomycin L, liposidomycin M, liposidomycin K, liposidomycin N	Streptomyces sp. SN-1061M
BGC0000934.1	0.43	Other (Phenazine)	5-acetyl-5,10-dihydrophenazine-1-carboxylic acid, 5-(2-hydroxyacetyl)-5,10-dihydrophenazine-1-carboxylic acid, endophenazine A1, endophenazine F, endophenazine G	Kitasatospora sp. HKI 714
BGC0000872.1	0.43	Other	A-90289 A, A-90289 B	Streptomyces sp. SANK 60405
BGC0001078.1	0.42	Terpene, Polyketide	furaquinocin B	Streptomyces sp. KO-3988

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP059048.1 - Region 4 - RaS-RiPP

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Location: 2,289,062 - 2,315,529 nt. (total: 26,468 nt) Show pHMM detection rules used

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001209.1	0.26	RiPP	streptide	Streptococcus thermophilus LMD-9
BGC0000902.1	0.17	Other	flaviolin	Saccharopolyspora erythraea NRRL 2338
BGC0000779.1	0.14	Saccharide	lipopolysaccharide	Aeromonas piscicola
BGC0000780.1	0.14	Saccharide	O&K-antigen	Vibrio parahaemolyticus
BGC0000285.1	0.14	Polyketide, Saccharide	flaviolin rhamnoside, 3,3'-diflaviolin, flaviolin	Saccharopolyspora erythraea
BGC0000938.1	0.12	Other (Aminocoumarin)	fosfomycin	Streptomyces fradiae
BGC0001650.1	0.10	NRP	Le-pyrrolopyrazines	Lysobacter enzymogenes
BGC0000343.1	0.07	NRP	enterobactin	Pseudomonas sp. J465
BGC0001377.1	0.07	Polyketide	uncialamycin	Streptomyces uncialis
BGC0001815.1	0.07	Polyketide	uncialamycin	Streptomyces uncialis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001209.1	0.59	RiPP	streptide	Streptococcus thermophilus LMD-9
BGC0000902.1	0.48	Other	flaviolin	Saccharopolyspora erythraea NRRL 2338
BGC0000779.1	0.44	Saccharide	lipopolysaccharide	Aeromonas piscicola
BGC0000780.1	0.44	Saccharide	O&K-antigen	Vibrio parahaemolyticus
BGC0000285.1	0.43	Polyketide, Saccharide	flaviolin rhamnoside, 3,3'-diflaviolin, flaviolin	Saccharopolyspora erythraea
BGC0000938.1	0.39	Other (Aminocoumarin)	fosfomycin	Streptomyces fradiae
BGC0001650.1	0.35	NRP	Le-pyrrolopyrazines	Lysobacter enzymogenes
BGC0000343.1	0.29	NRP	enterobactin	Pseudomonas sp. J465
BGC0001377.1	0.28	Polyketide	uncialamycin	Streptomyces uncialis
BGC0001815.1	0.28	Polyketide	uncialamycin	Streptomyces uncialis

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names