GCF_009734005.1_ASM973400v2_genomic - 3 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_CP038996.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	cyclic-lactone-autoinducer	401,446	422,048
Region 1.2	T3PKS	985,424	1,026,578
Region 1.3	RiPP-like	2,318,791	2,336,909	enterocin A	RiPP	100%

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	cyclic-lactone-autoinducer	401,446	422,048
Region 1.2	T3PKS	985,424	1,026,578
Region 1.3	RiPP-like	2,318,791	2,336,909	enterocin A	RiPP	100%

No secondary metabolite regions were found in these records:: NZ_CP038997.1

Compact view

NZ_CP038996.1 - Region 1 - cyclic-lactone-autoinducer

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Location: 401,446 - 422,048 nt. (total: 20,603 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001291.1	0.18	RiPP	enterocin NKR-5-3B	Enterococcus faecium
BGC0000494.1	0.16	RiPP	uberolysin	Streptococcus uberis
BGC0000804.1	0.14	Saccharide	acarviostatin I03, acarviostatin II03, acarviostatin III03, acarviostatin IV03	Streptomyces coelicoflavus ZG0656
BGC0000624.1	0.08	RiPP	salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide	Lactobacillus salivarius
BGC0001510.1	0.07	Other	anisomycin	Streptomyces hygrospinosus
BGC0001614.1	0.05	NRP	hassallidin E	Planktothrix serta PCC 8927
BGC0001728.1	0.03	NRP, Polyketide	paenilipoheptin	Paenibacillus polymyxa E681
BGC0001011.1	0.03	NRP, Polyketide	meridamycin	Streptomyces sp. NRRL 30748

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001291.1	0.50	RiPP	enterocin NKR-5-3B	Enterococcus faecium
BGC0000494.1	0.46	RiPP	uberolysin	Streptococcus uberis
BGC0000804.1	0.44	Saccharide	acarviostatin I03, acarviostatin II03, acarviostatin III03, acarviostatin IV03	Streptomyces coelicoflavus ZG0656
BGC0000624.1	0.32	RiPP	salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide	Lactobacillus salivarius
BGC0001510.1	0.27	Other	anisomycin	Streptomyces hygrospinosus
BGC0001614.1	0.23	NRP	hassallidin E	Planktothrix serta PCC 8927
BGC0001728.1	0.17	NRP, Polyketide	paenilipoheptin	Paenibacillus polymyxa E681
BGC0001011.1	0.16	NRP, Polyketide	meridamycin	Streptomyces sp. NRRL 30748

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP038996.1 - Region 2 - T3PKS

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Location: 985,424 - 1,026,578 nt. (total: 41,155 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000286.1	0.22	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0000255.1	0.20	Polyketide	pederin	Uncultured bacterium
BGC0000523.1	0.19	RiPP	lactocin S	Lactobacillus sakei
BGC0000867.1	0.18	Other	polyhydroxyalkanoic acids	Ectothiorhodospira shaposhnikovii
BGC0000866.1	0.17	Other	polyhydroxyalkanoate	Burkholderia sp. DSM 9242
BGC0001120.1	0.16	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0001571.1	0.15	Terpene	demethoxyviridin	Nodulisporium sp.
BGC0001080.1	0.14	Other (Phenazine)	endophenazine A, endophenazine B	Streptomyces anulatus
BGC0000703.1	0.13	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0000934.1	0.13	Other (Phenazine)	5-acetyl-5,10-dihydrophenazine-1-carboxylic acid, 5-(2-hydroxyacetyl)-5,10-dihydrophenazine-1-carboxylic acid, endophenazine A1, endophenazine F, endophenazine G	Kitasatospora sp. HKI 714

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000286.1	0.56	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0000255.1	0.52	Polyketide	pederin	Uncultured bacterium
BGC0000523.1	0.52	RiPP	lactocin S	Lactobacillus sakei
BGC0000867.1	0.50	Other	polyhydroxyalkanoic acids	Ectothiorhodospira shaposhnikovii
BGC0000866.1	0.49	Other	polyhydroxyalkanoate	Burkholderia sp. DSM 9242
BGC0001120.1	0.47	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0001571.1	0.45	Terpene	demethoxyviridin	Nodulisporium sp.
BGC0001080.1	0.44	Other (Phenazine)	endophenazine A, endophenazine B	Streptomyces anulatus
BGC0000703.1	0.41	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0000934.1	0.41	Other (Phenazine)	5-acetyl-5,10-dihydrophenazine-1-carboxylic acid, 5-(2-hydroxyacetyl)-5,10-dihydrophenazine-1-carboxylic acid, endophenazine A1, endophenazine F, endophenazine G	Kitasatospora sp. HKI 714

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

NZ_CP038996.1 - Region 3 - RiPP-like

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Location: 2,318,791 - 2,336,909 nt. (total: 18,119 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000618.1	0.65	RiPP	enterocin A	Enterococcus faecium DO
BGC0000617.1	0.37	RiPP	coagulin	Bacillus coagulans
BGC0000619.1	0.32	RiPP	gassericin T	Lactobacillus gasseri
BGC0001388.1	0.32	RiPP	gassericin E	Lactobacillus gasseri
BGC0001602.1	0.32	RiPP	gassericin-T	Lactobacillus gasseri
BGC0000558.1	0.24	RiPP	sublancin 168	Bacillus subtilis subsp. subtilis str. 168
BGC0000554.1	0.21	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000624.1	0.20	RiPP	salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide	Lactobacillus salivarius
BGC0001120.1	0.17	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000488.1	0.17	RiPP	circularin A	Clostridium beijerinckii

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000618.1	0.87	RiPP	enterocin A	Enterococcus faecium DO
BGC0000617.1	0.69	RiPP	coagulin	Bacillus coagulans
BGC0000619.1	0.65	RiPP	gassericin T	Lactobacillus gasseri
BGC0001388.1	0.65	RiPP	gassericin E	Lactobacillus gasseri
BGC0001602.1	0.65	RiPP	gassericin-T	Lactobacillus gasseri
BGC0000558.1	0.57	RiPP	sublancin 168	Bacillus subtilis subsp. subtilis str. 168
BGC0000554.1	0.54	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000624.1	0.52	RiPP	salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide	Lactobacillus salivarius
BGC0001120.1	0.48	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000488.1	0.48	RiPP	circularin A	Clostridium beijerinckii

Similar known gene clusters

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names