GCF_902375225.1_MGYG-HGUT-01461_genomic - 3 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

c00002_NZ_CABK.. (original name was: NZ_CABKTA010000002.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RRE-containing	819,202	839,543

c00005_NZ_CABK.. (original name was: NZ_CABKTA010000005.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	NAPAA	545,316	579,206

c00011_NZ_CABK.. (original name was: NZ_CABKTA010000011.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	arylpolyene	24,460	72,168	flexirubin	Other	48%

Region	Type	From	To	Most similar known cluster	Similarity
Region 2.1	RRE-containing	819,202	839,543
Region 5.1	NAPAA	545,316	579,206
Region 11.1	arylpolyene	24,460	72,168	flexirubin	Other	48%

No secondary metabolite regions were found in these records:: c00001_NZ_CABK.. (original name was: NZ_CABKTA010000001.1); c00003_NZ_CABK.. (original name was: NZ_CABKTA010000003.1); c00004_NZ_CABK.. (original name was: NZ_CABKTA010000004.1); c00006_NZ_CABK.. (original name was: NZ_CABKTA010000006.1); c00007_NZ_CABK.. (original name was: NZ_CABKTA010000007.1); c00008_NZ_CABK.. (original name was: NZ_CABKTA010000008.1); c00009_NZ_CABK.. (original name was: NZ_CABKTA010000009.1); c00010_NZ_CABK.. (original name was: NZ_CABKTA010000010.1); c00012_NZ_CABK.. (original name was: NZ_CABKTA010000012.1); c00013_NZ_CABK.. (original name was: NZ_CABKTA010000013.1); c00014_NZ_CABK.. (original name was: NZ_CABKTA010000014.1); c00015_NZ_CABK.. (original name was: NZ_CABKTA010000015.1); c00016_NZ_CABK.. (original name was: NZ_CABKTA010000016.1); c00017_NZ_CABK.. (original name was: NZ_CABKTA010000017.1); c00018_NZ_CABK.. (original name was: NZ_CABKTA010000018.1)

Compact view

c00002_NZ_CABK.. - Region 1 - RRE-containing

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Location: 819,202 - 839,543 nt. (total: 20,342 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001412.1	0.34	Saccharide	polysaccharide C	Bacteroides fragilis
BGC0001120.1	0.17	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0001589.1	0.17	Saccharide	exopolysaccharides	Burkholderia cenocepacia J2315
BGC0001588.1	0.16	Saccharide	exopolysaccharides	Burkholderia pseudomallei 1026b
BGC0001838.1	0.09	NRP	WLIP	Pseudomonas putida
BGC0002025.1	0.05	NRP	thaxteramide C	Jahnella sp. MSr9139
BGC0001093.1	0.05	NRP, Polyketide	disorazol A	Sorangium cellulosum
BGC0000080.1	0.04	Polyketide	jerangolid A, jerangolid D	Sorangium cellulosum

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001412.1	0.67	Saccharide	polysaccharide C	Bacteroides fragilis
BGC0001120.1	0.48	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0001589.1	0.48	Saccharide	exopolysaccharides	Burkholderia cenocepacia J2315
BGC0001588.1	0.47	Saccharide	exopolysaccharides	Burkholderia pseudomallei 1026b
BGC0001838.1	0.34	NRP	WLIP	Pseudomonas putida
BGC0002025.1	0.21	NRP	thaxteramide C	Jahnella sp. MSr9139
BGC0001093.1	0.21	NRP, Polyketide	disorazol A	Sorangium cellulosum
BGC0000080.1	0.18	Polyketide	jerangolid A, jerangolid D	Sorangium cellulosum

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00005_NZ_CABK.. - Region 1 - NAPAA

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Location: 545,316 - 579,206 nt. (total: 33,891 nt) Show pHMM detection rules used

NAPAA: (AMP-binding and PP-binding and TIGR02353)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

NRPS/PKS modules

Pfam domains

TIGRFAM domains

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000375.1	0.21	NRP	indigoidine	Streptomyces chromofuscus
BGC0000427.1	0.21	NRP	shinorine, 4-deoxygadusol, mycosporine glycine	Trichormus variabilis ATCC 29413
BGC0001399.1	0.20	NRP	fellutamide B	Aspergillus nidulans FGSC A4
BGC0000851.1	0.19	Other	albonoursin	Streptomyces noursei ATCC 11455
BGC0001479.1	0.18	NRP	anabaenopeptin NZ857, nostamide A	Nostoc punctiforme PCC 73102
BGC0001135.1	0.18	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis
BGC0001128.1	0.18	NRP	luminmide	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001615.1	0.18	NRP	hexose-palythine-serine, hexose-shinorine	Heteroscytonema crispum UCFS10
BGC0001844.1	0.18	NRP	holrhizin	Paraburkholderia rhizoxinica HKI 454
BGC0001131.1	0.18	NRP	ambactin	Xenorhabdus miraniensis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000375.1	0.54	NRP	indigoidine	Streptomyces chromofuscus
BGC0000427.1	0.54	NRP	shinorine, 4-deoxygadusol, mycosporine glycine	Trichormus variabilis ATCC 29413
BGC0001399.1	0.53	NRP	fellutamide B	Aspergillus nidulans FGSC A4
BGC0000851.1	0.51	Other	albonoursin	Streptomyces noursei ATCC 11455
BGC0001479.1	0.50	NRP	anabaenopeptin NZ857, nostamide A	Nostoc punctiforme PCC 73102
BGC0001135.1	0.50	NRP	bicornutin A1, bicornutin A2	Xenorhabdus budapestensis
BGC0001128.1	0.50	NRP	luminmide	Photorhabdus laumondii subsp. laumondii TTO1
BGC0001615.1	0.50	NRP	hexose-palythine-serine, hexose-shinorine	Heteroscytonema crispum UCFS10
BGC0001844.1	0.50	NRP	holrhizin	Paraburkholderia rhizoxinica HKI 454
BGC0001131.1	0.50	NRP	ambactin	Xenorhabdus miraniensis

Similar known gene clusters

No matches found.

Module view

Legend

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 545315 - 579206:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg5_472

Search NORINE for peptide: strict or relaxed

AMP-binding (14..405): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAESIGtViK
Nearest Stachelhaus code:: lys
Stachelhaus code match:: 80% (moderate)

c00011_NZ_CABK.. - Region 1 - arylpolyene

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Location: 24,460 - 72,168 nt. (total: 47,709 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001075.1	0.29	Terpene, Polyketide	aurachin RE	Rhodococcus erythropolis
BGC0000231.1	0.24	Polyketide	griseusin	Streptomyces griseus
BGC0001197.1	0.23	Polyketide	frankiamicin	Frankia sp. EAN1pec
BGC0000234.1	0.22	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0000228.1	0.22	Polyketide	granaticin	Streptomyces violaceoruber
BGC0001897.1	0.22	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0000194.1	0.21	Polyketide	actinorhodin	Streptomyces coelicolor A3(2)
BGC0000839.1	0.21	Other	flexirubin	Chitinophaga pinensis DSM 2588
BGC0000248.1	0.21	Polyketide	naphtocyclinone	Streptomyces arenae
BGC0000221.1	0.20	Polyketide	erdacin	uncultured soil bacterium V167

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001075.1	0.62	Terpene, Polyketide	aurachin RE	Rhodococcus erythropolis
BGC0000231.1	0.57	Polyketide	griseusin	Streptomyces griseus
BGC0001197.1	0.56	Polyketide	frankiamicin	Frankia sp. EAN1pec
BGC0000234.1	0.55	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0000228.1	0.55	Polyketide	granaticin	Streptomyces violaceoruber
BGC0001897.1	0.54	Polyketide	cepacin A	Burkholderia ambifaria IOP40-10
BGC0000194.1	0.54	Polyketide	actinorhodin	Streptomyces coelicolor A3(2)
BGC0000839.1	0.54	Other	flexirubin	Chitinophaga pinensis DSM 2588
BGC0000248.1	0.53	Polyketide	naphtocyclinone	Streptomyces arenae
BGC0000221.1	0.53	Polyketide	erdacin	uncultured soil bacterium V167

Similar known gene clusters

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names