GCF_902363655.1_MGYG-HGUT-00135_genomic - 4 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

c00001_NZ_CABJ.. (original name was: NZ_CABJAT010000001.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	ranthipeptide	464,354	486,041

c00002_NZ_CABJ.. (original name was: NZ_CABJAT010000002.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	cyclic-lactone-autoinducer	349,937	370,218

c00006_NZ_CABJ.. (original name was: NZ_CABJAT010000006.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	cyclic-lactone-autoinducer	64,728	85,361

c00011_NZ_CABJ.. (original name was: NZ_CABJAT010000011.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	cyclic-lactone-autoinducer	111,066	131,611

Region	Type	From	To	Similarity
Region 1.1	ranthipeptide	464,354	486,041
Region 2.1	cyclic-lactone-autoinducer	349,937	370,218
Region 6.1	cyclic-lactone-autoinducer	64,728	85,361
Region 11.1	cyclic-lactone-autoinducer	111,066	131,611

No secondary metabolite regions were found in these records:: c00003_NZ_CABJ.. (original name was: NZ_CABJAT010000003.1); c00004_NZ_CABJ.. (original name was: NZ_CABJAT010000004.1); c00005_NZ_CABJ.. (original name was: NZ_CABJAT010000005.1); c00007_NZ_CABJ.. (original name was: NZ_CABJAT010000007.1); c00008_NZ_CABJ.. (original name was: NZ_CABJAT010000008.1); c00009_NZ_CABJ.. (original name was: NZ_CABJAT010000009.1); c00010_NZ_CABJ.. (original name was: NZ_CABJAT010000010.1); c00012_NZ_CABJ.. (original name was: NZ_CABJAT010000012.1); c00013_NZ_CABJ.. (original name was: NZ_CABJAT010000013.1); c00014_NZ_CABJ.. (original name was: NZ_CABJAT010000014.1); c00015_NZ_CABJ.. (original name was: NZ_CABJAT010000015.1); c00016_NZ_CABJ.. (original name was: NZ_CABJAT010000016.1); c00017_NZ_CABJ.. (original name was: NZ_CABJAT010000017.1); c00018_NZ_CABJ.. (original name was: NZ_CABJAT010000018.1); c00019_NZ_CABJ.. (original name was: NZ_CABJAT010000019.1); c00020_NZ_CABJ.. (original name was: NZ_CABJAT010000020.1); c00021_NZ_CABJ.. (original name was: NZ_CABJAT010000021.1); c00022_NZ_CABJ.. (original name was: NZ_CABJAT010000022.1); c00023_NZ_CABJ.. (original name was: NZ_CABJAT010000023.1); c00024_NZ_CABJ.. (original name was: NZ_CABJAT010000024.1)

Compact view

c00001_NZ_CABJ.. - Region 1 - ranthipeptide

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Location: 464,354 - 486,041 nt. (total: 21,688 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000602.1	0.20	RiPP	subtilosin A	Bacillus subtilis subsp. spizizenii ATCC 6633
BGC0001664.1	0.18	Terpene	merosterol	Scytonema sp. PCC 10023
BGC0001789.1	0.17	RiPP	suicin 90-1330	Streptococcus suis
BGC0000536.1	0.17	RiPP	nisin Q	Lactococcus lactis
BGC0000537.1	0.16	RiPP	nisin U	Streptococcus uberis
BGC0000547.1	0.16	RiPP	salivaricin 9	Streptococcus salivarius
BGC0000557.1	0.16	RiPP	streptococcin A-FF22	Streptococcus pyogenes
BGC0000535.1	0.16	RiPP	nisin A	Lactococcus lactis subsp. lactis
BGC0001579.1	0.16	RiPP	duramycin	Streptomyces cinnamoneus
BGC0000601.1	0.16	RiPP	sporulation killing factor	Bacillus subtilis subsp. subtilis str. 168

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000602.1	0.52	RiPP	subtilosin A	Bacillus subtilis subsp. spizizenii ATCC 6633
BGC0001664.1	0.50	Terpene	merosterol	Scytonema sp. PCC 10023
BGC0001789.1	0.48	RiPP	suicin 90-1330	Streptococcus suis
BGC0000536.1	0.48	RiPP	nisin Q	Lactococcus lactis
BGC0000537.1	0.47	RiPP	nisin U	Streptococcus uberis
BGC0000547.1	0.47	RiPP	salivaricin 9	Streptococcus salivarius
BGC0000557.1	0.47	RiPP	streptococcin A-FF22	Streptococcus pyogenes
BGC0000535.1	0.47	RiPP	nisin A	Lactococcus lactis subsp. lactis
BGC0001579.1	0.47	RiPP	duramycin	Streptomyces cinnamoneus
BGC0000601.1	0.47	RiPP	sporulation killing factor	Bacillus subtilis subsp. subtilis str. 168

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00002_NZ_CABJ.. - Region 1 - cyclic-lactone-autoinducer

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Location: 349,937 - 370,218 nt. (total: 20,282 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000488.1	0.18	RiPP	circularin A	Clostridium beijerinckii
BGC0000501.1	0.16	RiPP	catenulipeptin	Catenulispora acidiphila DSM 44928
BGC0000486.1	0.16	RiPP	butyrivibriocin AR10	Butyrivibrio fibrisolvens
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000616.1	0.16	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0001579.1	0.16	RiPP	duramycin	Streptomyces cinnamoneus
BGC0000519.1	0.16	RiPP	labyrinthopeptin A2, labyrinthopeptin A1, labyrinthopeptin A3	Actinomadura namibiensis
BGC0001222.1	0.16	RiPP	acidocin B	Lactobacillus acidophilus
BGC0000491.1	0.16	RiPP	gassericin A	Lactobacillus gasseri
BGC0000513.1	0.15	RiPP	Ery-9, Ery-6, Ery-8, Ery-7, Ery-5, Ery-4, Ery-3	Saccharopolyspora erythraea NRRL 2338

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000488.1	0.49	RiPP	circularin A	Clostridium beijerinckii
BGC0000501.1	0.47	RiPP	catenulipeptin	Catenulispora acidiphila DSM 44928
BGC0000486.1	0.46	RiPP	butyrivibriocin AR10	Butyrivibrio fibrisolvens
BGC0000554.1	0.46	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000616.1	0.46	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0001579.1	0.46	RiPP	duramycin	Streptomyces cinnamoneus
BGC0000519.1	0.46	RiPP	labyrinthopeptin A2, labyrinthopeptin A1, labyrinthopeptin A3	Actinomadura namibiensis
BGC0001222.1	0.46	RiPP	acidocin B	Lactobacillus acidophilus
BGC0000491.1	0.46	RiPP	gassericin A	Lactobacillus gasseri
BGC0000513.1	0.46	RiPP	Ery-9, Ery-6, Ery-8, Ery-7, Ery-5, Ery-4, Ery-3	Saccharopolyspora erythraea NRRL 2338

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00006_NZ_CABJ.. - Region 1 - cyclic-lactone-autoinducer

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Location: 64,728 - 85,361 nt. (total: 20,634 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000488.1	0.20	RiPP	circularin A	Clostridium beijerinckii
BGC0001210.1	0.17	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0000542.1	0.17	RiPP	paenicidin B	Paenibacillus terrae
BGC0000541.1	0.17	RiPP	paenicidin A	Paenibacillus polymyxa
BGC0000626.1	0.16	RiPP	thuricin	Bacillus thuringiensis
BGC0001311.1	0.16	RiPP	flavecins	Ruminococcus flavefaciens FD-1
BGC0001391.1	0.16	RiPP	thusin	Bacillus thuringiensis serovar rongseni
BGC0000521.1	0.16	RiPP	lacticin 481	Lactococcus lactis subsp. lactis
BGC0000616.1	0.16	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0000539.1	0.16	RiPP	nukacin ISK-1	Staphylococcus warneri

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000488.1	0.52	RiPP	circularin A	Clostridium beijerinckii
BGC0001210.1	0.48	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0000542.1	0.48	RiPP	paenicidin B	Paenibacillus terrae
BGC0000541.1	0.47	RiPP	paenicidin A	Paenibacillus polymyxa
BGC0000626.1	0.47	RiPP	thuricin	Bacillus thuringiensis
BGC0001311.1	0.47	RiPP	flavecins	Ruminococcus flavefaciens FD-1
BGC0001391.1	0.47	RiPP	thusin	Bacillus thuringiensis serovar rongseni
BGC0000521.1	0.47	RiPP	lacticin 481	Lactococcus lactis subsp. lactis
BGC0000616.1	0.47	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0000539.1	0.47	RiPP	nukacin ISK-1	Staphylococcus warneri

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

c00011_NZ_CABJ.. - Region 1 - cyclic-lactone-autoinducer

Download region GenBank file

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Location: 111,066 - 131,611 nt. (total: 20,546 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001551.1	0.16	RiPP	citrulassin E	Streptomyces glaucescens
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000504.1	0.16	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0001120.1	0.15	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000586.1	0.14	RiPP	microcin E492	Klebsiella pneumoniae RYC492
BGC0000589.1	0.14	RiPP	microcin M	Escherichia coli Nissle 1917
BGC0000587.1	0.14	RiPP	microcin H47	Escherichia coli
BGC0000703.1	0.14	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0000294.1	0.14	NRP	acinetobactin	Acinetobacter baumannii
BGC0000590.1	0.14	RiPP	microcin N	Escherichia coli

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001551.1	0.47	RiPP	citrulassin E	Streptomyces glaucescens
BGC0000554.1	0.47	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000504.1	0.47	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0001120.1	0.46	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000586.1	0.44	RiPP	microcin E492	Klebsiella pneumoniae RYC492
BGC0000589.1	0.44	RiPP	microcin M	Escherichia coli Nissle 1917
BGC0000587.1	0.44	RiPP	microcin H47	Escherichia coli
BGC0000703.1	0.43	Saccharide	kanamycin	Streptomyces kanamyceticus
BGC0000294.1	0.43	NRP	acinetobactin	Acinetobacter baumannii
BGC0000590.1	0.43	RiPP	microcin N	Escherichia coli

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names