GCF_900459355.1_41906_A02_genomic - 3 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_UHFZ01000003 (original name was: NZ_UHFZ01000003.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RiPP-like	394,181	404,477
Region 1.2	T3PKS	1,828,219	1,869,391

NZ_UHFZ01000001 (original name was: NZ_UHFZ01000001.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RiPP-like	1	9,724

Region	Type	From	To	Similarity
Region 1.1	RiPP-like	394,181	404,477
Region 1.2	T3PKS	1,828,219	1,869,391
Region 3.1	RiPP-like	1	9,724

No secondary metabolite regions were found in these records:: NZ_UHFZ01000002 (original name was: NZ_UHFZ01000002.1)

Compact view

c00001_NZ_UHFZ.. - Region 1 - RiPP-like

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Location: 394,181 - 404,477 nt. (total: 10,297 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001891.1	0.15	Other	closthioamide	Ruminiclostridium cellulolyticum H10
BGC0000548.1	0.15	RiPP	salivaricin A	Streptococcus salivarius
BGC0001120.1	0.15	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000916.1	0.14	Other	molybdenum cofactor	Staphylococcus carnosus
BGC0000294.1	0.14	NRP	acinetobactin	Acinetobacter baumannii
BGC0000589.1	0.14	RiPP	microcin M	Escherichia coli Nissle 1917
BGC0000587.1	0.14	RiPP	microcin H47	Escherichia coli
BGC0000588.1	0.14	RiPP	microcin L	Escherichia coli
BGC0000584.1	0.14	RiPP	colicin V	Escherichia coli

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000554.1	0.46	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001891.1	0.45	Other	closthioamide	Ruminiclostridium cellulolyticum H10
BGC0000548.1	0.45	RiPP	salivaricin A	Streptococcus salivarius
BGC0001120.1	0.45	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000916.1	0.44	Other	molybdenum cofactor	Staphylococcus carnosus
BGC0000294.1	0.44	NRP	acinetobactin	Acinetobacter baumannii
BGC0000589.1	0.43	RiPP	microcin M	Escherichia coli Nissle 1917
BGC0000587.1	0.43	RiPP	microcin H47	Escherichia coli
BGC0000588.1	0.43	RiPP	microcin L	Escherichia coli
BGC0000584.1	0.43	RiPP	colicin V	Escherichia coli

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00001_NZ_UHFZ.. - Region 2 - T3PKS

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Location: 1,828,219 - 1,869,391 nt. (total: 41,173 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001891.1	0.30	Other	closthioamide	Ruminiclostridium cellulolyticum H10
BGC0001962.1	0.22	Polyketide	hierridin B, hierridin C	Cyanobium sp. LEGE 06113
BGC0000286.1	0.16	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0000205.1	0.16	Polyketide	bryostatin	Candidatus Endobugula sertula
BGC0000592.1	0.15	RiPP	microviridin B	Microcystis aeruginosa NIES-298
BGC0001120.1	0.14	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0002005.1	0.13	RiPP	RaxX	Xanthomonas oryzae pv. oryzae
BGC0000934.1	0.12	Other (Phenazine)	5-acetyl-5,10-dihydrophenazine-1-carboxylic acid, 5-(2-hydroxyacetyl)-5,10-dihydrophenazine-1-carboxylic acid, endophenazine A1, endophenazine F, endophenazine G	Kitasatospora sp. HKI 714
BGC0001080.1	0.12	Other (Phenazine)	endophenazine A, endophenazine B	Streptomyces anulatus
BGC0001606.1	0.11	Polyketide	gibepyrone-A	Fusarium fujikuroi IMI 58289

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001891.1	0.63	Other	closthioamide	Ruminiclostridium cellulolyticum H10
BGC0001962.1	0.55	Polyketide	hierridin B, hierridin C	Cyanobium sp. LEGE 06113
BGC0000286.1	0.47	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0000205.1	0.47	Polyketide	bryostatin	Candidatus Endobugula sertula
BGC0000592.1	0.45	RiPP	microviridin B	Microcystis aeruginosa NIES-298
BGC0001120.1	0.43	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0002005.1	0.42	RiPP	RaxX	Xanthomonas oryzae pv. oryzae
BGC0000934.1	0.40	Other (Phenazine)	5-acetyl-5,10-dihydrophenazine-1-carboxylic acid, 5-(2-hydroxyacetyl)-5,10-dihydrophenazine-1-carboxylic acid, endophenazine A1, endophenazine F, endophenazine G	Kitasatospora sp. HKI 714
BGC0001080.1	0.39	Other (Phenazine)	endophenazine A, endophenazine B	Streptomyces anulatus
BGC0001606.1	0.38	Polyketide	gibepyrone-A	Fusarium fujikuroi IMI 58289

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00003_NZ_UHFZ.. - Region 1 - RiPP-like

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Location: 1 - 9,724 nt. (total: 9,724 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001891.1	0.15	Other	closthioamide	Ruminiclostridium cellulolyticum H10
BGC0001222.1	0.15	RiPP	acidocin B	Lactobacillus acidophilus
BGC0000491.1	0.15	RiPP	gassericin A	Lactobacillus gasseri
BGC0000548.1	0.15	RiPP	salivaricin A	Streptococcus salivarius
BGC0001120.1	0.15	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000916.1	0.14	Other	molybdenum cofactor	Staphylococcus carnosus
BGC0000294.1	0.14	NRP	acinetobactin	Acinetobacter baumannii
BGC0001138.1	0.14	Other (Nucleoside)	a201a	Marinactinospora thermotolerans
BGC0000589.1	0.14	RiPP	microcin M	Escherichia coli Nissle 1917

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000554.1	0.46	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001891.1	0.45	Other	closthioamide	Ruminiclostridium cellulolyticum H10
BGC0001222.1	0.45	RiPP	acidocin B	Lactobacillus acidophilus
BGC0000491.1	0.45	RiPP	gassericin A	Lactobacillus gasseri
BGC0000548.1	0.45	RiPP	salivaricin A	Streptococcus salivarius
BGC0001120.1	0.45	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000916.1	0.44	Other	molybdenum cofactor	Staphylococcus carnosus
BGC0000294.1	0.44	NRP	acinetobactin	Acinetobacter baumannii
BGC0001138.1	0.43	Other (Nucleoside)	a201a	Marinactinospora thermotolerans
BGC0000589.1	0.43	RiPP	microcin M	Escherichia coli Nissle 1917

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names