GCF_002076835.1_ASM207683v1_genomic - 7 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_CP020549.1

Region	Type	From	To
Region 1.1	RiPP-like	68,099	82,120
Region 1.2	RiPP-like	138,068	146,356
Region 1.3	RiPP-like	535,378	548,783
Region 1.4	RiPP-like	679,363	688,222
Region 1.5	T3PKS	1,616,501	1,657,673
Region 1.6	RiPP-like	1,842,277	1,851,265
Region 1.7	RiPP-like	1,876,466	1,886,762

Region	Type	From	To	Similarity
Region 1.1	RiPP-like	68,099	82,120
Region 1.2	RiPP-like	138,068	146,356
Region 1.3	RiPP-like	535,378	548,783
Region 1.4	RiPP-like	679,363	688,222
Region 1.5	T3PKS	1,616,501	1,657,673
Region 1.6	RiPP-like	1,842,277	1,851,265
Region 1.7	RiPP-like	1,876,466	1,886,762

No secondary metabolite regions were found in these records:: NZ_CP020550.1

Compact view

NZ_CP020549.1 - Region 1 - RiPP-like

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Location: 68,099 - 82,120 nt. (total: 14,022 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000619.1	0.35	RiPP	gassericin T	Lactobacillus gasseri
BGC0001602.1	0.35	RiPP	gassericin-T	Lactobacillus gasseri
BGC0001388.1	0.35	RiPP	gassericin E	Lactobacillus gasseri
BGC0000617.1	0.31	RiPP	coagulin	Bacillus coagulans
BGC0000558.1	0.23	RiPP	sublancin 168	Bacillus subtilis subsp. subtilis str. 168
BGC0000624.1	0.22	RiPP	salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide	Lactobacillus salivarius
BGC0000554.1	0.21	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001862.1	0.21	RiPP	geocillicin	Aeribacillus pallidus
BGC0001930.1	0.21	RiPP	pallidocin	Aeribacillus pallidus
BGC0001863.1	0.20	RiPP, Terpene	bacillicn CER074	Bacillus mycoides

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000619.1	0.68	RiPP	gassericin T	Lactobacillus gasseri
BGC0001602.1	0.68	RiPP	gassericin-T	Lactobacillus gasseri
BGC0001388.1	0.68	RiPP	gassericin E	Lactobacillus gasseri
BGC0000617.1	0.65	RiPP	coagulin	Bacillus coagulans
BGC0000558.1	0.56	RiPP	sublancin 168	Bacillus subtilis subsp. subtilis str. 168
BGC0000624.1	0.55	RiPP	salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide	Lactobacillus salivarius
BGC0000554.1	0.54	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001862.1	0.53	RiPP	geocillicin	Aeribacillus pallidus
BGC0001930.1	0.53	RiPP	pallidocin	Aeribacillus pallidus
BGC0001863.1	0.53	RiPP, Terpene	bacillicn CER074	Bacillus mycoides

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP020549.1 - Region 2 - RiPP-like

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Location: 138,068 - 146,356 nt. (total: 8,289 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000504.1	0.16	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000500.1	0.16	RiPP	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum
BGC0001551.1	0.16	RiPP	citrulassin E	Streptomyces glaucescens
BGC0001576.1	0.16	RiPP	divamide A	Prochloron didemni
BGC0000558.1	0.16	RiPP	sublancin 168	Bacillus subtilis subsp. subtilis str. 168
BGC0001639.1	0.15	RiPP	klebsidin	Klebsiella pneumoniae
BGC0000548.1	0.15	RiPP	salivaricin A	Streptococcus salivarius
BGC0001120.1	0.14	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000294.1	0.14	NRP	acinetobactin	Acinetobacter baumannii

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000504.1	0.47	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000554.1	0.46	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000500.1	0.46	RiPP	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum
BGC0001551.1	0.46	RiPP	citrulassin E	Streptomyces glaucescens
BGC0001576.1	0.46	RiPP	divamide A	Prochloron didemni
BGC0000558.1	0.46	RiPP	sublancin 168	Bacillus subtilis subsp. subtilis str. 168
BGC0001639.1	0.45	RiPP	klebsidin	Klebsiella pneumoniae
BGC0000548.1	0.45	RiPP	salivaricin A	Streptococcus salivarius
BGC0001120.1	0.44	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000294.1	0.44	NRP	acinetobactin	Acinetobacter baumannii

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP020549.1 - Region 3 - RiPP-like

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Location: 535,378 - 548,783 nt. (total: 13,406 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001388.1	0.40	RiPP	gassericin E	Lactobacillus gasseri
BGC0000619.1	0.40	RiPP	gassericin T	Lactobacillus gasseri
BGC0001602.1	0.40	RiPP	gassericin-T	Lactobacillus gasseri
BGC0000617.1	0.31	RiPP	coagulin	Bacillus coagulans
BGC0000624.1	0.19	RiPP	salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide	Lactobacillus salivarius
BGC0001229.1	0.18	RiPP	SBI-06990 A1, SBI-06989 A2	Streptomyces bingchenggensis BCW-1
BGC0001407.1	0.16	RiPP	bicereucin	Bacillus cereus SJ1
BGC0001862.1	0.16	RiPP	geocillicin	Aeribacillus pallidus
BGC0001930.1	0.16	RiPP	pallidocin	Aeribacillus pallidus
BGC0001861.1	0.16	RiPP	bacillicin BAG2O	Bacillus cereus BAG2O-1

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001388.1	0.72	RiPP	gassericin E	Lactobacillus gasseri
BGC0000619.1	0.72	RiPP	gassericin T	Lactobacillus gasseri
BGC0001602.1	0.72	RiPP	gassericin-T	Lactobacillus gasseri
BGC0000617.1	0.65	RiPP	coagulin	Bacillus coagulans
BGC0000624.1	0.50	RiPP	salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide	Lactobacillus salivarius
BGC0001229.1	0.50	RiPP	SBI-06990 A1, SBI-06989 A2	Streptomyces bingchenggensis BCW-1
BGC0001407.1	0.47	RiPP	bicereucin	Bacillus cereus SJ1
BGC0001862.1	0.47	RiPP	geocillicin	Aeribacillus pallidus
BGC0001930.1	0.47	RiPP	pallidocin	Aeribacillus pallidus
BGC0001861.1	0.46	RiPP	bacillicin BAG2O	Bacillus cereus BAG2O-1

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP020549.1 - Region 4 - RiPP-like

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Location: 679,363 - 688,222 nt. (total: 8,860 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000500.1	0.16	RiPP	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum
BGC0001407.1	0.16	RiPP	bicereucin	Bacillus cereus SJ1
BGC0001639.1	0.15	RiPP	klebsidin	Klebsiella pneumoniae
BGC0001891.1	0.15	Other	closthioamide	Ruminiclostridium cellulolyticum H10
BGC0000548.1	0.15	RiPP	salivaricin A	Streptococcus salivarius
BGC0000916.1	0.15	Other	molybdenum cofactor	Staphylococcus carnosus
BGC0001120.1	0.15	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000294.1	0.14	NRP	acinetobactin	Acinetobacter baumannii
BGC0001525.1	0.14	Other	bartoloside 2, bartoloside 3, bartoloside 4	Synechocystis salina LEGE 06155

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000554.1	0.47	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000500.1	0.46	RiPP	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum
BGC0001407.1	0.46	RiPP	bicereucin	Bacillus cereus SJ1
BGC0001639.1	0.46	RiPP	klebsidin	Klebsiella pneumoniae
BGC0001891.1	0.46	Other	closthioamide	Ruminiclostridium cellulolyticum H10
BGC0000548.1	0.45	RiPP	salivaricin A	Streptococcus salivarius
BGC0000916.1	0.45	Other	molybdenum cofactor	Staphylococcus carnosus
BGC0001120.1	0.44	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000294.1	0.43	NRP	acinetobactin	Acinetobacter baumannii
BGC0001525.1	0.43	Other	bartoloside 2, bartoloside 3, bartoloside 4	Synechocystis salina LEGE 06155

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP020549.1 - Region 5 - T3PKS

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Location: 1,616,501 - 1,657,673 nt. (total: 41,173 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000286.1	0.23	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0001483.1	0.22	Other	5-isoprenylindole-3-carboxylate β-D-glycosyl ester	Streptomyces sp. RM-5-8
BGC0000519.1	0.21	RiPP	labyrinthopeptin A2, labyrinthopeptin A1, labyrinthopeptin A3	Actinomadura namibiensis
BGC0000496.1	0.21	RiPP	AmfS	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000843.1	0.20	Other (Non-NRP beta-lactam)	alanylclavam, 2-hydroxymethylclavam, 2-formyloxymethylclavam, clavam-2-carboxylate	Streptomyces clavuligerus ATCC 27064
BGC0000502.1	0.17	RiPP	cerecidin, cerecidin A1, cerecidin A2, cerecidin A3, cerecidin A4, cerecidin A5, cerecidin A6, cerecidin A7	Bacillus cereus
BGC0000568.1	0.17	RiPP	microcin B17	Escherichia coli
BGC0001940.1	0.16	Polyketide	pyxidicycline A, pyxidicycline B	Pyxidicoccus fallax
BGC0000600.1	0.16	RiPP	thurincin H	Bacillus thuringiensis
BGC0001927.1	0.16	Other	A-94964	Streptomyces sp.

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000286.1	0.56	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0001483.1	0.55	Other	5-isoprenylindole-3-carboxylate β-D-glycosyl ester	Streptomyces sp. RM-5-8
BGC0000519.1	0.54	RiPP	labyrinthopeptin A2, labyrinthopeptin A1, labyrinthopeptin A3	Actinomadura namibiensis
BGC0000496.1	0.54	RiPP	AmfS	Streptomyces griseus subsp. griseus NBRC 13350
BGC0000843.1	0.53	Other (Non-NRP beta-lactam)	alanylclavam, 2-hydroxymethylclavam, 2-formyloxymethylclavam, clavam-2-carboxylate	Streptomyces clavuligerus ATCC 27064
BGC0000502.1	0.48	RiPP	cerecidin, cerecidin A1, cerecidin A2, cerecidin A3, cerecidin A4, cerecidin A5, cerecidin A6, cerecidin A7	Bacillus cereus
BGC0000568.1	0.48	RiPP	microcin B17	Escherichia coli
BGC0001940.1	0.47	Polyketide	pyxidicycline A, pyxidicycline B	Pyxidicoccus fallax
BGC0000600.1	0.47	RiPP	thurincin H	Bacillus thuringiensis
BGC0001927.1	0.47	Other	A-94964	Streptomyces sp.

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

NZ_CP020549.1 - Region 6 - RiPP-like

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Location: 1,842,277 - 1,851,265 nt. (total: 8,989 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001639.1	0.16	RiPP	klebsidin	Klebsiella pneumoniae
BGC0000765.1	0.16	Saccharide	exopolysaccharide	Lactobacillus johnsonii
BGC0000767.1	0.16	Saccharide	exopolysaccharide	Lactobacillus johnsonii
BGC0000766.1	0.15	Saccharide	exopolysaccharide	Lactobacillus johnsonii
BGC0000803.1	0.15	Saccharide	GG exopolysaccharide	Lactobacillus rhamnosus GG
BGC0001891.1	0.15	Other	closthioamide	Ruminiclostridium cellulolyticum H10
BGC0001887.1	0.14	RiPP	huazacin	Bacillus thuringiensis serovar huazhongensis BGSC 4BD1
BGC0001120.1	0.14	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000916.1	0.14	Other	molybdenum cofactor	Staphylococcus carnosus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000554.1	0.47	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001639.1	0.46	RiPP	klebsidin	Klebsiella pneumoniae
BGC0000765.1	0.46	Saccharide	exopolysaccharide	Lactobacillus johnsonii
BGC0000767.1	0.46	Saccharide	exopolysaccharide	Lactobacillus johnsonii
BGC0000766.1	0.45	Saccharide	exopolysaccharide	Lactobacillus johnsonii
BGC0000803.1	0.45	Saccharide	GG exopolysaccharide	Lactobacillus rhamnosus GG
BGC0001891.1	0.44	Other	closthioamide	Ruminiclostridium cellulolyticum H10
BGC0001887.1	0.44	RiPP	huazacin	Bacillus thuringiensis serovar huazhongensis BGSC 4BD1
BGC0001120.1	0.44	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000916.1	0.44	Other	molybdenum cofactor	Staphylococcus carnosus

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

NZ_CP020549.1 - Region 7 - RiPP-like

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Location: 1,876,466 - 1,886,762 nt. (total: 10,297 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000548.1	0.16	RiPP	salivaricin A	Streptococcus salivarius
BGC0001639.1	0.15	RiPP	klebsidin	Klebsiella pneumoniae
BGC0001891.1	0.15	Other	closthioamide	Ruminiclostridium cellulolyticum H10
BGC0000916.1	0.15	Other	molybdenum cofactor	Staphylococcus carnosus
BGC0001120.1	0.15	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000586.1	0.14	RiPP	microcin E492	Klebsiella pneumoniae RYC492
BGC0000589.1	0.14	RiPP	microcin M	Escherichia coli Nissle 1917
BGC0000587.1	0.14	RiPP	microcin H47	Escherichia coli
BGC0000588.1	0.14	RiPP	microcin L	Escherichia coli

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000554.1	0.46	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000548.1	0.46	RiPP	salivaricin A	Streptococcus salivarius
BGC0001639.1	0.46	RiPP	klebsidin	Klebsiella pneumoniae
BGC0001891.1	0.45	Other	closthioamide	Ruminiclostridium cellulolyticum H10
BGC0000916.1	0.45	Other	molybdenum cofactor	Staphylococcus carnosus
BGC0001120.1	0.45	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000586.1	0.44	RiPP	microcin E492	Klebsiella pneumoniae RYC492
BGC0000589.1	0.44	RiPP	microcin M	Escherichia coli Nissle 1917
BGC0000587.1	0.44	RiPP	microcin H47	Escherichia coli
BGC0000588.1	0.44	RiPP	microcin L	Escherichia coli

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names