GCF_003860075.1_ASM386007v1_genomic - 2 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_RQZC01000013 (original name was: NZ_RQZC01000013.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	thiopeptide	1	26,831

NZ_RQZC01000003 (original name was: NZ_RQZC01000003.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	thiopeptide	40,685	70,665

Region	Type	From	To	Most similar known cluster	Similarity
Region 5.1	thiopeptide	1	26,831
Region 13.1	thiopeptide	40,685	70,665

No secondary metabolite regions were found in these records:: NZ_RQZC01000001 (original name was: NZ_RQZC01000001.1); NZ_RQZC01000002 (original name was: NZ_RQZC01000002.1); NZ_RQZC01000011 (original name was: NZ_RQZC01000011.1); NZ_RQZC01000012 (original name was: NZ_RQZC01000012.1); NZ_RQZC01000014 (original name was: NZ_RQZC01000014.1); NZ_RQZC01000015 (original name was: NZ_RQZC01000015.1); NZ_RQZC01000016 (original name was: NZ_RQZC01000016.1); NZ_RQZC01000017 (original name was: NZ_RQZC01000017.1); NZ_RQZC01000018 (original name was: NZ_RQZC01000018.1); NZ_RQZC01000019 (original name was: NZ_RQZC01000019.1); NZ_RQZC01000020 (original name was: NZ_RQZC01000020.1); NZ_RQZC01000021 (original name was: NZ_RQZC01000021.1); NZ_RQZC01000022 (original name was: NZ_RQZC01000022.1); NZ_RQZC01000023 (original name was: NZ_RQZC01000023.1); NZ_RQZC01000024 (original name was: NZ_RQZC01000024.1); NZ_RQZC01000025 (original name was: NZ_RQZC01000025.1); NZ_RQZC01000026 (original name was: NZ_RQZC01000026.1); NZ_RQZC01000027 (original name was: NZ_RQZC01000027.1); NZ_RQZC01000028 (original name was: NZ_RQZC01000028.1); NZ_RQZC01000029 (original name was: NZ_RQZC01000029.1); NZ_RQZC01000030 (original name was: NZ_RQZC01000030.1); NZ_RQZC01000004 (original name was: NZ_RQZC01000004.1); NZ_RQZC01000031 (original name was: NZ_RQZC01000031.1); NZ_RQZC01000032 (original name was: NZ_RQZC01000032.1); NZ_RQZC01000033 (original name was: NZ_RQZC01000033.1); NZ_RQZC01000034 (original name was: NZ_RQZC01000034.1); NZ_RQZC01000035 (original name was: NZ_RQZC01000035.1); NZ_RQZC01000036 (original name was: NZ_RQZC01000036.1); NZ_RQZC01000037 (original name was: NZ_RQZC01000037.1); NZ_RQZC01000038 (original name was: NZ_RQZC01000038.1); NZ_RQZC01000039 (original name was: NZ_RQZC01000039.1); NZ_RQZC01000040 (original name was: NZ_RQZC01000040.1); NZ_RQZC01000005 (original name was: NZ_RQZC01000005.1); NZ_RQZC01000041 (original name was: NZ_RQZC01000041.1); NZ_RQZC01000042 (original name was: NZ_RQZC01000042.1); NZ_RQZC01000043 (original name was: NZ_RQZC01000043.1); NZ_RQZC01000044 (original name was: NZ_RQZC01000044.1); NZ_RQZC01000045 (original name was: NZ_RQZC01000045.1); NZ_RQZC01000046 (original name was: NZ_RQZC01000046.1); NZ_RQZC01000047 (original name was: NZ_RQZC01000047.1); NZ_RQZC01000048 (original name was: NZ_RQZC01000048.1); NZ_RQZC01000006 (original name was: NZ_RQZC01000006.1); NZ_RQZC01000007 (original name was: NZ_RQZC01000007.1); NZ_RQZC01000008 (original name was: NZ_RQZC01000008.1); NZ_RQZC01000009 (original name was: NZ_RQZC01000009.1); NZ_RQZC01000010 (original name was: NZ_RQZC01000010.1)

Compact view

c00005_NZ_RQZC.. - Region 1 - thiopeptide

Download region GenBank file

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Location: 1 - 26,831 nt. (total: 26,831 nt) Show pHMM detection rules used

Region on contig edge.

thiopeptide: ((YcaO or TIGR03882) and ((thio_amide and (PF06968 or PF04055 or PF07366)) or Lant_dehydr_C or Lant_dehydr_N or PF07366 or PF06968 or PF04055) or thiostrepton)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Thiopeptides

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001146.1	0.17	RiPP	cyclothiazomycin C	Streptomyces sp. NRRL WC-3908
BGC0000606.1	0.17	RiPP	lactazole	Streptomyces lactacystinaeus
BGC0001145.1	0.15	RiPP	cyclothiazomycin b1	Streptomyces mobaraensis NBRC 13819 = DSM 40847
BGC0002013.1	0.15	RiPP	curacozole	Streptomyces curacoi
BGC0000615.1	0.14	RiPP	TP-1161	Nocardiopsis sp. TFS65-07
BGC0000603.1	0.13	RiPP	cyclothiazomycin	Streptomyces hygroscopicus
BGC0000613.1	0.13	RiPP	thiomuracin A	Nonomuraea sp. Bp3714-39
BGC0000605.1	0.13	RiPP	GE37468	Streptomyces sp. ATCC 55365
BGC0001640.1	0.12	RiPP	kocurin	Kocuria rosea
BGC0001472.1	0.12	RiPP	berninamycin A	Streptomyces bernensis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001146.1	0.48	RiPP	cyclothiazomycin C	Streptomyces sp. NRRL WC-3908
BGC0000606.1	0.48	RiPP	lactazole	Streptomyces lactacystinaeus
BGC0001145.1	0.46	RiPP	cyclothiazomycin b1	Streptomyces mobaraensis NBRC 13819 = DSM 40847
BGC0002013.1	0.44	RiPP	curacozole	Streptomyces curacoi
BGC0000615.1	0.44	RiPP	TP-1161	Nocardiopsis sp. TFS65-07
BGC0000603.1	0.42	RiPP	cyclothiazomycin	Streptomyces hygroscopicus
BGC0000613.1	0.41	RiPP	thiomuracin A	Nonomuraea sp. Bp3714-39
BGC0000605.1	0.41	RiPP	GE37468	Streptomyces sp. ATCC 55365
BGC0001640.1	0.41	RiPP	kocurin	Kocuria rosea
BGC0001472.1	0.40	RiPP	berninamycin A	Streptomyces bernensis

Similar known gene clusters

No matches found.

Thiopeptide predictions

No core peptides found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

Thiopeptides

Core peptide predictions

No core peptides found.

c00013_NZ_RQZC.. - Region 1 - thiopeptide

Download region GenBank file

Download region SVG

Location: 40,685 - 70,665 nt. (total: 29,981 nt) Show pHMM detection rules used

thiopeptide: ((YcaO or TIGR03882) and ((thio_amide and (PF06968 or PF04055 or PF07366)) or Lant_dehydr_C or Lant_dehydr_N or PF07366 or PF06968 or PF04055) or thiostrepton)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Thiopeptides

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002013.1	0.20	RiPP	curacozole	Streptomyces curacoi
BGC0000565.1	0.16	RiPP	goadsporin	Streptomyces sp. TP-A0584
BGC0000528.1	0.16	RiPP	michiganin A	Clavibacter michiganensis subsp. michiganensis NCPPB 382
BGC0001364.1	0.16	RiPP	cinnamycin B	Actinomadura atramentaria DSM 43919
BGC0001174.1	0.15	RiPP	corynazolicin	Corynebacterium urealyticum DSM 7111
BGC0001374.1	0.15	Other	thienodolin	Streptomyces albogriseolus
BGC0001472.1	0.14	RiPP	berninamycin A	Streptomyces bernensis
BGC0000503.1	0.14	RiPP	cinnamycin	Streptomyces cinnamoneus
BGC0001810.1	0.14	Polyketide	trehangelin	Polymorphospora rubra
BGC0000193.1	0.14	Polyketide	aclacinomycin	Streptomyces galilaeus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0002013.1	0.52	RiPP	curacozole	Streptomyces curacoi
BGC0000565.1	0.47	RiPP	goadsporin	Streptomyces sp. TP-A0584
BGC0000528.1	0.47	RiPP	michiganin A	Clavibacter michiganensis subsp. michiganensis NCPPB 382
BGC0001364.1	0.47	RiPP	cinnamycin B	Actinomadura atramentaria DSM 43919
BGC0001174.1	0.45	RiPP	corynazolicin	Corynebacterium urealyticum DSM 7111
BGC0001374.1	0.45	Other	thienodolin	Streptomyces albogriseolus
BGC0001472.1	0.43	RiPP	berninamycin A	Streptomyces bernensis
BGC0000503.1	0.43	RiPP	cinnamycin	Streptomyces cinnamoneus
BGC0001810.1	0.43	Polyketide	trehangelin	Polymorphospora rubra
BGC0000193.1	0.43	Polyketide	aclacinomycin	Streptomyces galilaeus

Similar known gene clusters

No matches found.

Thiopeptide predictions

No core peptides found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

Thiopeptides

Core peptide predictions

No core peptides found.