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Overview
1.1
1.2
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1.5
1.6

### Identified secondary metabolite regions using strictness 'relaxed'

NZ_CP029491.1

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 1 | LAP,thiopeptide | 483,058 | 506,395 |
Region 2 | T3PKS | 1,135,246 | 1,176,412 | exopolysaccharide | Saccharide | 8%
Region 3 | RiPP-like | 1,197,981 | 1,210,360 |
Region 4 | RiPP-like | 1,602,806 | 1,614,386 |
Region 5 | RiPP-like | 1,837,917 | 1,848,655 |
Region 6 | RiPP-like | 2,080,952 | 2,091,179 |

NZ_CP029491.1 - Region 1 - LAP,thiopeptide
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 483,058 - 506,395 nt. (total: 23,338 nt) Show pHMM detection rules used
LAP: ((((goadsporin_like or PF00881 or TIGR03605) and (YcaO or TIGR03882 or TIGR03604)) or TIGR03603 or TIGR03602) and not cyanobactin_synth)
thiopeptide: ((YcaO or TIGR03882) and ((thio_amide and (PF06968 or PF04055 or PF07366)) or Lant_dehydr_C or Lant_dehydr_N or PF07366 or PF06968 or PF04055) or thiostrepton)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Thiopeptides
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | LAP | thiopeptide | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | --- | ---
BGC0000568.1 |  |  | 0.54 | RiPP | microcin B17 | Escherichia coli
BGC0001174.1 |  |  | 0.51 | RiPP | corynazolicin | Corynebacterium urealyticum DSM 7111
BGC0001171.1 |  |  | 0.46 | RiPP | listeriolysin S | Listeria monocytogenes serotype 4b str. F2365
BGC0000531.1 |  |  | 0.42 | RiPP | mutacin I | Streptococcus mutans
BGC0000533.1 |  |  | 0.42 | RiPP | mutacin III | Streptococcus mutans
BGC0000530.1 |  |  | 0.42 | RiPP | mutacin B-Ny266 | Streptococcus mutans N66
BGC0000554.1 |  |  | 0.41 | RiPP | SRO15-3108 | Streptomyces filamentosus NRRL 15998
BGC0000626.1 |  |  | 0.40 | RiPP | thuricin | Bacillus thuringiensis
BGC0000605.1 |  |  | 0.39 | RiPP | GE37468 | Streptomyces sp. ATCC 55365
BGC0000539.1 |  |  | 0.38 | RiPP | nukacin ISK-1 | Staphylococcus warneri

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000568.1 |  | 0.61 | RiPP | microcin B17 | Escherichia coli
BGC0001174.1 |  | 0.59 | RiPP | corynazolicin | Corynebacterium urealyticum DSM 7111
BGC0001171.1 |  | 0.56 | RiPP | listeriolysin S | Listeria monocytogenes serotype 4b str. F2365
BGC0000531.1 |  | 0.54 | RiPP | mutacin I | Streptococcus mutans
BGC0000533.1 |  | 0.54 | RiPP | mutacin III | Streptococcus mutans
BGC0000530.1 |  | 0.54 | RiPP | mutacin B-Ny266 | Streptococcus mutans N66
BGC0000554.1 |  | 0.53 | RiPP | SRO15-3108 | Streptomyces filamentosus NRRL 15998
BGC0000626.1 |  | 0.52 | RiPP | thuricin | Bacillus thuringiensis
BGC0000605.1 |  | 0.52 | RiPP | GE37468 | Streptomyces sp. ATCC 55365
BGC0000539.1 |  | 0.51 | RiPP | nukacin ISK-1 | Staphylococcus warneri

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Thiopeptide predictions
Lists the possible core peptides for each biosynthetic enzyme, including the predicted class. Each core peptide shows the leader and core peptide sequences, separated by a dash. Predicted tail sequences are also shown.
No core peptides found.
Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
Thiopeptides
Core peptide predictions
Lists the possible core peptides in the region. Each core peptide lists its possible molecular weights and the scores for cleavage site prediction and RODEO. If relevant, other features, such as macrocycle and amidation, will also be listed.
No core peptides found.
NZ_CP029491.1 - Region 2 - T3PKS
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1,135,246 - 1,176,412 nt. (total: 41,167 nt) Show pHMM detection rules used
T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
NRPS/PKS domains
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Detailed domain annotation
Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
A glossary is available here.
Selected features only
Show module domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | T3PKS | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000286.1 |  | 0.23 | Polyketide | viguiepinol | Streptomyces sp. KO-3988
BGC0000255.1 |  | 0.21 | Polyketide | pederin | Uncultured bacterium
BGC0002000.1 |  | 0.19 | Polyketide | setomimycin | Streptomyces aurantiacus JA 4570
BGC0000236.1 |  | 0.19 | Polyketide | kinamycin | Streptomyces murayamaensis
BGC0001723.1 |  | 0.18 | Polyketide | oviedomycin | Streptomyces antibioticus
BGC0001848.1 |  | 0.18 | Other | diazaquinomycin H, diazaquinomycin J | Micromonospora sp. B006
BGC0001895.1 |  | 0.18 | Polyketide | huanglongmycin A, huanglongmycin B, huanglongmycin C | Streptomyces sp. CB09001
BGC0001904.1 |  | 0.17 | Polyketide | fluostatin | Micromonospora rosaria
BGC0000730.1 |  | 0.17 | Saccharide | capsular polysaccharide | Klebsiella pneumoniae
BGC0000731.1 |  | 0.17 | Saccharide | capsular polysaccharide | Klebsiella pneumoniae

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000286.1 |  | 0.56 | Polyketide | viguiepinol | Streptomyces sp. KO-3988
BGC0000255.1 |  | 0.53 | Polyketide | pederin | Uncultured bacterium
BGC0002000.1 |  | 0.51 | Polyketide | setomimycin | Streptomyces aurantiacus JA 4570
BGC0000236.1 |  | 0.51 | Polyketide | kinamycin | Streptomyces murayamaensis
BGC0001723.1 |  | 0.50 | Polyketide | oviedomycin | Streptomyces antibioticus
BGC0001848.1 |  | 0.50 | Other | diazaquinomycin H, diazaquinomycin J | Micromonospora sp. B006
BGC0001895.1 |  | 0.49 | Polyketide | huanglongmycin A, huanglongmycin B, huanglongmycin C | Streptomyces sp. CB09001
BGC0001904.1 |  | 0.49 | Polyketide | fluostatin | Micromonospora rosaria
BGC0000730.1 |  | 0.49 | Saccharide | capsular polysaccharide | Klebsiella pneumoniae
BGC0000731.1 |  | 0.49 | Saccharide | capsular polysaccharide | Klebsiella pneumoniae

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
NZ_CP029491.1 - Region 3 - RiPP-like
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1,197,981 - 1,210,360 nt. (total: 12,380 nt) Show pHMM detection rules used
RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | RiPP-like | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000619.1 |  | 0.40 | RiPP | gassericin T | Lactobacillus gasseri
BGC0001602.1 |  | 0.40 | RiPP | gassericin-T | Lactobacillus gasseri
BGC0001388.1 |  | 0.40 | RiPP | gassericin E | Lactobacillus gasseri
BGC0000624.1 |  | 0.35 | RiPP | salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide | Lactobacillus salivarius
BGC0000617.1 |  | 0.31 | RiPP | coagulin | Bacillus coagulans
BGC0000558.1 |  | 0.16 | RiPP | sublancin 168 | Bacillus subtilis subsp. subtilis str. 168
BGC0001928.1 |  | 0.14 | Other | (2R,3S,4S)-5-fluoro-2,3,4-trihydroxypentanoic acid | Streptomyces sp. MA37
BGC0000703.1 |  | 0.14 | Saccharide | kanamycin | Streptomyces kanamyceticus
BGC0000584.1 |  | 0.14 | RiPP | colicin V | Escherichia coli
BGC0000294.1 |  | 0.14 | NRP | acinetobactin | Acinetobacter baumannii

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000619.1 |  | 0.72 | RiPP | gassericin T | Lactobacillus gasseri
BGC0001602.1 |  | 0.72 | RiPP | gassericin-T | Lactobacillus gasseri
BGC0001388.1 |  | 0.72 | RiPP | gassericin E | Lactobacillus gasseri
BGC0000624.1 |  | 0.68 | RiPP | salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide | Lactobacillus salivarius
BGC0000617.1 |  | 0.65 | RiPP | coagulin | Bacillus coagulans
BGC0000558.1 |  | 0.46 | RiPP | sublancin 168 | Bacillus subtilis subsp. subtilis str. 168
BGC0001928.1 |  | 0.44 | Other | (2R,3S,4S)-5-fluoro-2,3,4-trihydroxypentanoic acid | Streptomyces sp. MA37
BGC0000703.1 |  | 0.43 | Saccharide | kanamycin | Streptomyces kanamyceticus
BGC0000584.1 |  | 0.43 | RiPP | colicin V | Escherichia coli
BGC0000294.1 |  | 0.43 | NRP | acinetobactin | Acinetobacter baumannii

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
NZ_CP029491.1 - Region 4 - RiPP-like
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1,602,806 - 1,614,386 nt. (total: 11,581 nt) Show pHMM detection rules used
RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | RiPP-like | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000617.1 |  | 0.21 | RiPP | coagulin | Bacillus coagulans
BGC0000619.1 |  | 0.16 | RiPP | gassericin T | Lactobacillus gasseri
BGC0001602.1 |  | 0.16 | RiPP | gassericin-T | Lactobacillus gasseri
BGC0001388.1 |  | 0.15 | RiPP | gassericin E | Lactobacillus gasseri
BGC0000624.1 |  | 0.14 | RiPP | salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide | Lactobacillus salivarius
BGC0000554.1 |  | 0.13 | RiPP | SRO15-3108 | Streptomyces filamentosus NRRL 15998
BGC0001887.1 |  | 0.13 | RiPP | huazacin | Bacillus thuringiensis serovar huazhongensis BGSC 4BD1
BGC0001862.1 |  | 0.11 | RiPP | geocillicin | Aeribacillus pallidus
BGC0001930.1 |  | 0.11 | RiPP | pallidocin | Aeribacillus pallidus
BGC0001861.1 |  | 0.11 | RiPP | bacillicin BAG2O | Bacillus cereus BAG2O-1

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000617.1 |  | 0.54 | RiPP | coagulin | Bacillus coagulans
BGC0000619.1 |  | 0.46 | RiPP | gassericin T | Lactobacillus gasseri
BGC0001602.1 |  | 0.46 | RiPP | gassericin-T | Lactobacillus gasseri
BGC0001388.1 |  | 0.46 | RiPP | gassericin E | Lactobacillus gasseri
BGC0000624.1 |  | 0.44 | RiPP | salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide | Lactobacillus salivarius
BGC0000554.1 |  | 0.42 | RiPP | SRO15-3108 | Streptomyces filamentosus NRRL 15998
BGC0001887.1 |  | 0.41 | RiPP | huazacin | Bacillus thuringiensis serovar huazhongensis BGSC 4BD1
BGC0001862.1 |  | 0.38 | RiPP | geocillicin | Aeribacillus pallidus
BGC0001930.1 |  | 0.38 | RiPP | pallidocin | Aeribacillus pallidus
BGC0001861.1 |  | 0.37 | RiPP | bacillicin BAG2O | Bacillus cereus BAG2O-1

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
NZ_CP029491.1 - Region 5 - RiPP-like
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1,837,917 - 1,848,655 nt. (total: 10,739 nt) Show pHMM detection rules used
RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | RiPP-like | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000617.1 |  | 0.21 | RiPP | coagulin | Bacillus coagulans
BGC0000558.1 |  | 0.16 | RiPP | sublancin 168 | Bacillus subtilis subsp. subtilis str. 168
BGC0000619.1 |  | 0.16 | RiPP | gassericin T | Lactobacillus gasseri
BGC0001602.1 |  | 0.16 | RiPP | gassericin-T | Lactobacillus gasseri
BGC0001388.1 |  | 0.16 | RiPP | gassericin E | Lactobacillus gasseri
BGC0000584.1 |  | 0.14 | RiPP | colicin V | Escherichia coli
BGC0000624.1 |  | 0.14 | RiPP | salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide | Lactobacillus salivarius
BGC0000703.1 |  | 0.14 | Saccharide | kanamycin | Streptomyces kanamyceticus
BGC0000759.1 |  | 0.13 | Saccharide | diutan polysaccharide | Sphingomonas sp. ATCC 53159
BGC0000554.1 |  | 0.13 | RiPP | SRO15-3108 | Streptomyces filamentosus NRRL 15998

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000617.1 |  | 0.54 | RiPP | coagulin | Bacillus coagulans
BGC0000558.1 |  | 0.46 | RiPP | sublancin 168 | Bacillus subtilis subsp. subtilis str. 168
BGC0000619.1 |  | 0.46 | RiPP | gassericin T | Lactobacillus gasseri
BGC0001602.1 |  | 0.46 | RiPP | gassericin-T | Lactobacillus gasseri
BGC0001388.1 |  | 0.46 | RiPP | gassericin E | Lactobacillus gasseri
BGC0000584.1 |  | 0.44 | RiPP | colicin V | Escherichia coli
BGC0000624.1 |  | 0.44 | RiPP | salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide | Lactobacillus salivarius
BGC0000703.1 |  | 0.44 | Saccharide | kanamycin | Streptomyces kanamyceticus
BGC0000759.1 |  | 0.42 | Saccharide | diutan polysaccharide | Sphingomonas sp. ATCC 53159
BGC0000554.1 |  | 0.42 | RiPP | SRO15-3108 | Streptomyces filamentosus NRRL 15998

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
NZ_CP029491.1 - Region 6 - RiPP-like
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 2,080,952 - 2,091,179 nt. (total: 10,228 nt) Show pHMM detection rules used
RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

No matches found.

No matches found.

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names