GCF_003571725.1_ASM357172v1_genomic - 3 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_CP032159.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	terpene,T3PKS	354,077	400,988
Region 1.2	siderophore	736,842	751,829	staphyloferrin A	Other:Non-NRP siderophore	100%
Region 1.3	cyclic-lactone-autoinducer	876,353	897,061	N-tetradecanoyl tyrosine	Other	6%

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	terpene,T3PKS	354,077	400,988
Region 1.2	siderophore	736,842	751,829	staphyloferrin A	Other:Non-NRP siderophore	100%
Region 1.3	cyclic-lactone-autoinducer	876,353	897,061	N-tetradecanoyl tyrosine	Other	6%

No secondary metabolite regions were found in these records:: NZ_CP032158.1

Compact view

NZ_CP032159.1 - Region 1 - T3PKS,terpene

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Location: 354,077 - 400,988 nt. (total: 46,912 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)
T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Detailed domain annotation

Selected features only

Show module domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.90	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000648.1	0.46	Terpene	carotenoid	Myxococcus xanthus
BGC0000637.1	0.45	Terpene	carotenoid	Corynebacterium glutamicum
BGC0000640.1	0.45	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000664.1	0.44	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001227.1	0.44	Terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0000888.1	0.44	Other	bacilysin	Bacillus sp. CS93
BGC0000633.1	0.43	Terpene	carotenoid	Streptomyces avermitilis
BGC0000656.1	0.43	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0001456.1	0.42	Terpene	isorenieratene	Streptomyces argillaceus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000647.1	0.75	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000640.1	0.58	Terpene	carotenoid	Enterobacteriaceae bacterium DC404
BGC0000656.1	0.57	Terpene	zeaxanthin	Xanthobacter autotrophicus Py2
BGC0000664.1	0.57	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001456.1	0.56	Terpene	isorenieratene	Streptomyces argillaceus
BGC0001227.1	0.56	Terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0000630.1	0.56	Terpene	(2R,3S,3'S)-2-hydroxyastaxanthin	Paracoccus haeundaensis
BGC0000633.1	0.56	Terpene	carotenoid	Streptomyces avermitilis
BGC0000648.1	0.56	Terpene	carotenoid	Myxococcus xanthus
BGC0000286.1	0.56	Polyketide	viguiepinol	Streptomyces sp. KO-3988

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP032159.1 - Region 2 - siderophore

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Location: 736,842 - 751,829 nt. (total: 14,988 nt) Show pHMM detection rules used

siderophore: IucA_IucC

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000944.1	0.57	Other (Non-NRP siderophore)	staphyloferrin A	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0001870.1	0.21	Other	putrebactin, avaroferrin	Xenorhabdus budapestensis
BGC0000939.1	0.21	Other	aerobactin	Grimontia hollisae
BGC0000947.1	0.19	Other	vibrioferrin	Vibrio alginolyticus
BGC0000883.1	0.17	Other	arginomycin	Streptomyces arginensis
BGC0000943.1	0.15	Other	staphylobactin	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0001211.1	0.09	NRP	albachelin	Amycolatopsis alba DSM 44262
BGC0001767.1	0.09	NRP	salinichelins	Salinispora pacifica CNY331
BGC0000423.1	0.09	NRP	scabichelin	Streptomyces scabiei 87.22
BGC0000708.1	0.09	Saccharide	lividomycin	Streptomyces lividus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000944.1	0.82	Other (Non-NRP siderophore)	staphyloferrin A	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0001870.1	0.54	Other	putrebactin, avaroferrin	Xenorhabdus budapestensis
BGC0000939.1	0.54	Other	aerobactin	Grimontia hollisae
BGC0000947.1	0.51	Other	vibrioferrin	Vibrio alginolyticus
BGC0000883.1	0.48	Other	arginomycin	Streptomyces arginensis
BGC0000943.1	0.46	Other	staphylobactin	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0001211.1	0.34	NRP	albachelin	Amycolatopsis alba DSM 44262
BGC0001767.1	0.34	NRP	salinichelins	Salinispora pacifica CNY331
BGC0000423.1	0.33	NRP	scabichelin	Streptomyces scabiei 87.22
BGC0000708.1	0.32	Saccharide	lividomycin	Streptomyces lividus

Similar known gene clusters

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP032159.1 - Region 3 - cyclic-lactone-autoinducer

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Location: 876,353 - 897,061 nt. (total: 20,709 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001687.1	0.13	Other	N-tetradecanoyl tyrosine	uncultured bacterium CSL12
BGC0000540.1	0.12	RiPP	paenibacillin	Paenibacillus polymyxa OSY-DF
BGC0000624.1	0.09	RiPP	salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide	Lactobacillus salivarius
BGC0001872.1	0.08	Polyketide	fabclavine-polyamine	Xenorhabdus bovienii SS-2004
BGC0001053.1	0.08	NRP, Polyketide	tubulysin A	Archangium disciforme
BGC0001836.1	0.07	Polyketide	tartrolon D, tartrolon F, tartrolon G	Gynuella sunshinyii YC6258
BGC0001056.1	0.05	NRP, Polyketide	zeamine, zeamine I, zeamine II, prezeamine, prezeamine I	Serratia plymuthica RVH1
BGC0001700.1	0.05	Polyketide	niphimycins C-E	Streptomyces sp. IMB7-145
BGC0000082.1	0.04	Polyketide	kijanimicin	Actinomadura kijaniata

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001687.1	0.42	Other	N-tetradecanoyl tyrosine	uncultured bacterium CSL12
BGC0000540.1	0.40	RiPP	paenibacillin	Paenibacillus polymyxa OSY-DF
BGC0000624.1	0.32	RiPP	salivaricin CRL1328 α peptide, salivaricin CRL1328 β peptide	Lactobacillus salivarius
BGC0001872.1	0.31	Polyketide	fabclavine-polyamine	Xenorhabdus bovienii SS-2004
BGC0001053.1	0.30	NRP, Polyketide	tubulysin A	Archangium disciforme
BGC0001836.1	0.29	Polyketide	tartrolon D, tartrolon F, tartrolon G	Gynuella sunshinyii YC6258
BGC0001056.1	0.24	NRP, Polyketide	zeamine, zeamine I, zeamine II, prezeamine, prezeamine I	Serratia plymuthica RVH1
BGC0001700.1	0.22	Polyketide	niphimycins C-E	Streptomyces sp. IMB7-145
BGC0000082.1	0.20	Polyketide	kijanimicin	Actinomadura kijaniata

Similar known gene clusters

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names