GCF_025561465.1_ASM2556146v1_genomic - 5 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_CP095100.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	terpene	194,230	215,093
Region 1.2	T3PKS	669,168	710,337	tallysomycin A	NRP:Glycopeptide + Polyketide:Modular type I + Saccharide:Hybrid/tailoring	5%
Region 1.3	siderophore	873,832	888,838	staphyloferrin A	Other:Non-NRP siderophore	100%
Region 1.4	cyclic-lactone-autoinducer	1,012,419	1,033,134
Region 1.5	RiPP-like	1,944,383	1,954,667

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	terpene	194,230	215,093
Region 1.2	T3PKS	669,168	710,337	tallysomycin A	NRP:Glycopeptide + Polyketide:Modular type I + Saccharide:Hybrid/tailoring	5%
Region 1.3	siderophore	873,832	888,838	staphyloferrin A	Other:Non-NRP siderophore	100%
Region 1.4	cyclic-lactone-autoinducer	1,012,419	1,033,134
Region 1.5	RiPP-like	1,944,383	1,954,667

No secondary metabolite regions were found in these records:: NZ_CP095101.1

Compact view

NZ_CP095100.1 - Region 1 - terpene

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Location: 194,230 - 215,093 nt. (total: 20,864 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000648.1	0.31	Terpene	carotenoid	Myxococcus xanthus
BGC0000647.1	0.31	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000645.1	0.22	Terpene	carotenoid	Halobacillus halophilus DSM 2266
BGC0001456.1	0.22	Terpene	isorenieratene	Streptomyces argillaceus
BGC0001227.1	0.21	Terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0000646.1	0.21	Terpene	β-carotein	uncultured bacterium
BGC0000633.1	0.20	Terpene	carotenoid	Streptomyces avermitilis
BGC0000664.1	0.20	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001985.1	0.15	Other	pyrazomycin	Streptomyces candidus
BGC0001850.1	0.14	Other (Shikimate-derived)	diazaquinomycin A, diazaquinomycin E, diazaquinomycin F, diazaquinomycin G	Streptomyces sp. F001

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000648.1	0.65	Terpene	carotenoid	Myxococcus xanthus
BGC0000647.1	0.64	Terpene	carotenoid	Rhodobacter sphaeroides
BGC0000645.1	0.55	Terpene	carotenoid	Halobacillus halophilus DSM 2266
BGC0001456.1	0.55	Terpene	isorenieratene	Streptomyces argillaceus
BGC0001227.1	0.54	Terpene	isorenieratene	Streptomyces collinus Tu 365
BGC0000646.1	0.54	Terpene	β-carotein	uncultured bacterium
BGC0000633.1	0.53	Terpene	carotenoid	Streptomyces avermitilis
BGC0000664.1	0.53	Terpene	isorenieratene	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001985.1	0.46	Other	pyrazomycin	Streptomyces candidus
BGC0001850.1	0.43	Other (Shikimate-derived)	diazaquinomycin A, diazaquinomycin E, diazaquinomycin F, diazaquinomycin G	Streptomyces sp. F001

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

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NZ_CP095100.1 - Region 2 - T3PKS

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Location: 669,168 - 710,337 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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NRPS/PKS domains

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KnownClusterBlast

Pfam domains

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Detailed domain annotation

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Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000286.1	0.23	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0000867.1	0.17	Other	polyhydroxyalkanoic acids	Ectothiorhodospira shaposhnikovii
BGC0000866.1	0.17	Other	polyhydroxyalkanoate	Burkholderia sp. DSM 9242
BGC0001947.1	0.17	Saccharide	K53 capsular polysaccharide	Acinetobacter baumannii
BGC0000528.1	0.16	RiPP	michiganin A	Clavibacter michiganensis subsp. michiganensis NCPPB 382
BGC0000874.1	0.16	Other	blasticidin S	Streptomyces griseochromogenes
BGC0001104.1	0.16	NRP, Polyketide	myxovirescin A1	Myxococcus xanthus DK 1622
BGC0000934.1	0.16	Other (Phenazine)	5-acetyl-5,10-dihydrophenazine-1-carboxylic acid, 5-(2-hydroxyacetyl)-5,10-dihydrophenazine-1-carboxylic acid, endophenazine A1, endophenazine F, endophenazine G	Kitasatospora sp. HKI 714
BGC0000205.1	0.16	Polyketide	bryostatin	Candidatus Endobugula sertula
BGC0001078.1	0.16	Terpene, Polyketide	furaquinocin B	Streptomyces sp. KO-3988

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000286.1	0.56	Polyketide	viguiepinol	Streptomyces sp. KO-3988
BGC0000867.1	0.48	Other	polyhydroxyalkanoic acids	Ectothiorhodospira shaposhnikovii
BGC0000866.1	0.48	Other	polyhydroxyalkanoate	Burkholderia sp. DSM 9242
BGC0001947.1	0.48	Saccharide	K53 capsular polysaccharide	Acinetobacter baumannii
BGC0000528.1	0.47	RiPP	michiganin A	Clavibacter michiganensis subsp. michiganensis NCPPB 382
BGC0000874.1	0.47	Other	blasticidin S	Streptomyces griseochromogenes
BGC0001104.1	0.47	NRP, Polyketide	myxovirescin A1	Myxococcus xanthus DK 1622
BGC0000934.1	0.46	Other (Phenazine)	5-acetyl-5,10-dihydrophenazine-1-carboxylic acid, 5-(2-hydroxyacetyl)-5,10-dihydrophenazine-1-carboxylic acid, endophenazine A1, endophenazine F, endophenazine G	Kitasatospora sp. HKI 714
BGC0000205.1	0.46	Polyketide	bryostatin	Candidatus Endobugula sertula
BGC0001078.1	0.46	Terpene, Polyketide	furaquinocin B	Streptomyces sp. KO-3988

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Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

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NZ_CP095100.1 - Region 3 - siderophore

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Location: 873,832 - 888,838 nt. (total: 15,007 nt) Show pHMM detection rules used

siderophore: IucA_IucC

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000944.1	0.53	Other (Non-NRP siderophore)	staphyloferrin A	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0000939.1	0.30	Other	aerobactin	Grimontia hollisae
BGC0000942.1	0.25	Other	petrobactin	Bacillus anthracis str. Ames
BGC0001870.1	0.22	Other	putrebactin, avaroferrin	Xenorhabdus budapestensis
BGC0000947.1	0.19	Other	vibrioferrin	Vibrio alginolyticus
BGC0000883.1	0.16	Other	arginomycin	Streptomyces arginensis
BGC0000943.1	0.15	Other	staphylobactin	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0001404.1	0.11	Polyketide	sorbicillin	Penicillium rubens Wisconsin 54-1255
BGC0001767.1	0.09	NRP	salinichelins	Salinispora pacifica CNY331
BGC0001738.1	0.09	NRP, Polyketide	phomasetin	Pyrenochaetopsis sp.

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000944.1	0.81	Other (Non-NRP siderophore)	staphyloferrin A	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0000939.1	0.63	Other	aerobactin	Grimontia hollisae
BGC0000942.1	0.58	Other	petrobactin	Bacillus anthracis str. Ames
BGC0001870.1	0.54	Other	putrebactin, avaroferrin	Xenorhabdus budapestensis
BGC0000947.1	0.51	Other	vibrioferrin	Vibrio alginolyticus
BGC0000883.1	0.47	Other	arginomycin	Streptomyces arginensis
BGC0000943.1	0.46	Other	staphylobactin	Staphylococcus aureus subsp. aureus NCTC 8325
BGC0001404.1	0.37	Polyketide	sorbicillin	Penicillium rubens Wisconsin 54-1255
BGC0001767.1	0.34	NRP	salinichelins	Salinispora pacifica CNY331
BGC0001738.1	0.32	NRP, Polyketide	phomasetin	Pyrenochaetopsis sp.

Similar known gene clusters

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Detailed TIGRFAM domain annotation

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NZ_CP095100.1 - Region 4 - cyclic-lactone-autoinducer

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Location: 1,012,419 - 1,033,134 nt. (total: 20,716 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001291.1	0.23	RiPP	enterocin NKR-5-3B	Enterococcus faecium
BGC0000569.1	0.16	RiPP	plantazolicin	Bacillus velezensis FZB42
BGC0001173.1	0.16	RiPP	plantazolicin	Bacillus pumilus ATCC 7061
BGC0001618.1	0.16	RiPP	hyicin 3682	Staphylococcus hyicus
BGC0001551.1	0.16	RiPP	citrulassin E	Streptomyces glaucescens
BGC0001171.1	0.15	RiPP	listeriolysin S	Listeria monocytogenes serotype 4b str. F2365
BGC0001743.1	0.15	RiPP	plantaricyclin	Lactobacillus plantarum
BGC0000600.1	0.15	RiPP	thurincin H	Bacillus thuringiensis
BGC0001120.1	0.14	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000698.1	0.14	Saccharide	hygromycin A	Streptomyces hygroscopicus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001291.1	0.56	RiPP	enterocin NKR-5-3B	Enterococcus faecium
BGC0000569.1	0.47	RiPP	plantazolicin	Bacillus velezensis FZB42
BGC0001173.1	0.47	RiPP	plantazolicin	Bacillus pumilus ATCC 7061
BGC0001618.1	0.47	RiPP	hyicin 3682	Staphylococcus hyicus
BGC0001551.1	0.46	RiPP	citrulassin E	Streptomyces glaucescens
BGC0001171.1	0.45	RiPP	listeriolysin S	Listeria monocytogenes serotype 4b str. F2365
BGC0001743.1	0.45	RiPP	plantaricyclin	Lactobacillus plantarum
BGC0000600.1	0.44	RiPP	thurincin H	Bacillus thuringiensis
BGC0001120.1	0.44	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0000698.1	0.42	Saccharide	hygromycin A	Streptomyces hygroscopicus

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_CP095100.1 - Region 5 - RiPP-like

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Location: 1,944,383 - 1,954,667 nt. (total: 10,285 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000504.1	0.15	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0001607.1	0.14	Other	gilvusmycin	Streptomyces sp. NRRL B-1347
BGC0001540.1	0.14	Other	CC-1065	Streptomyces zelensis
BGC0002005.1	0.13	RiPP	RaxX	Xanthomonas oryzae pv. oryzae
BGC0001887.1	0.13	RiPP	huazacin	Bacillus thuringiensis serovar huazhongensis BGSC 4BD1
BGC0000792.1	0.13	Saccharide	polysaccharide	Enterococcus faecalis OG1RF
BGC0001765.1	0.13	Saccharide	salecan	Agrobacterium tumefaciens
BGC0000774.1	0.13	Saccharide	lipopolysaccharide	Xanthomonas campestris pv. campestris
BGC0001896.1	0.13	Other	carbazomycin B	Streptomyces luteoverticillatus
BGC0001985.1	0.13	Other	pyrazomycin	Streptomyces candidus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000504.1	0.45	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0001607.1	0.43	Other	gilvusmycin	Streptomyces sp. NRRL B-1347
BGC0001540.1	0.43	Other	CC-1065	Streptomyces zelensis
BGC0002005.1	0.42	RiPP	RaxX	Xanthomonas oryzae pv. oryzae
BGC0001887.1	0.42	RiPP	huazacin	Bacillus thuringiensis serovar huazhongensis BGSC 4BD1
BGC0000792.1	0.42	Saccharide	polysaccharide	Enterococcus faecalis OG1RF
BGC0001765.1	0.42	Saccharide	salecan	Agrobacterium tumefaciens
BGC0000774.1	0.42	Saccharide	lipopolysaccharide	Xanthomonas campestris pv. campestris
BGC0001896.1	0.42	Other	carbazomycin B	Streptomyces luteoverticillatus
BGC0001985.1	0.42	Other	pyrazomycin	Streptomyces candidus

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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