GCF_002393505.1_ASM239350v1_genomic - 4 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_CP023536.1

Region	Type	From	To
Region 1	siderophore	1,007,633	1,019,429
Region 2	betalactone	2,132,475	2,157,967
Region 3	resorcinol	3,581,324	3,622,475
Region 4	thiopeptide	3,714,133	3,740,355

NZ_CP023536.1 - Region 1 - siderophore

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Location: 1,007,633 - 1,019,429 nt. (total: 11,797 nt) Show pHMM detection rules used

siderophore: IucA_IucC

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001572.1	0.31	Other	desferrioxamine E	Pantoea agglomerans
BGC0000940.1	0.27	Other	desferrioxamin B, desferrioxamine E	Streptomyces coelicolor A3(2)
BGC0001453.1	0.27	Other	desferrioxamine	Streptomyces argillaceus
BGC0001478.1	0.26	Other	desferrioxamine E	Streptomyces sp. ID38640
BGC0000941.1	0.25	Other	desferrioxamin B	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001870.1	0.17	Other	putrebactin, avaroferrin	Xenorhabdus budapestensis
BGC0001499.1	0.17	Other	aerobactin	Pantoea ananatis
BGC0001498.1	0.16	Other	aerobactin	Xenorhabdus szentirmaii DSM 16338
BGC0001531.1	0.16	Other	bisucaberin B	Tenacibaculum mesophilum
BGC0000939.1	0.15	Other	aerobactin	Grimontia hollisae

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001572.1	0.64	Other	desferrioxamine E	Pantoea agglomerans
BGC0000940.1	0.61	Other	desferrioxamin B, desferrioxamine E	Streptomyces coelicolor A3(2)
BGC0001453.1	0.61	Other	desferrioxamine	Streptomyces argillaceus
BGC0001478.1	0.59	Other	desferrioxamine E	Streptomyces sp. ID38640
BGC0000941.1	0.59	Other	desferrioxamin B	Streptomyces griseus subsp. griseus NBRC 13350
BGC0001870.1	0.48	Other	putrebactin, avaroferrin	Xenorhabdus budapestensis
BGC0001499.1	0.47	Other	aerobactin	Pantoea ananatis
BGC0001498.1	0.47	Other	aerobactin	Xenorhabdus szentirmaii DSM 16338
BGC0001531.1	0.46	Other	bisucaberin B	Tenacibaculum mesophilum
BGC0000939.1	0.46	Other	aerobactin	Grimontia hollisae

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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NZ_CP023536.1 - Region 2 - betalactone

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Location: 2,132,475 - 2,157,967 nt. (total: 25,493 nt) Show pHMM detection rules used

betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001859.1	0.24	Other (Phosphonate)	fosfomycin	Pseudomonas syringae
BGC0000904.1	0.21	Other	FR-900098	Streptomyces rubellomurinus
BGC0001441.1	0.17	Other	belactosin A, belactosin C	Streptomyces sp.
BGC0000375.1	0.15	NRP	indigoidine	Streptomyces chromofuscus
BGC0000842.1	0.13	Other (Non-NRP beta-lactam)	carbapenem MM4550	Streptomyces argenteolus
BGC0000597.1	0.13	RiPP	SWA-2138	Streptomyces sp. e14
BGC0000805.1	0.13	Saccharide	moenomycin	Streptomyces viridosporus ATCC 14672
BGC0001411.1	0.13	Saccharide	polysaccharide B	Bacteroides fragilis
BGC0000979.1	0.12	NRP, Polyketide	cylindrospermopsin	Aphanizomenon sp. 10E9
BGC0000980.1	0.12	NRP, Polyketide	cylindrospermopsin	Aphanizomenon sp. 22D11

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001859.1	0.58	Other (Phosphonate)	fosfomycin	Pseudomonas syringae
BGC0000904.1	0.54	Other	FR-900098	Streptomyces rubellomurinus
BGC0001441.1	0.48	Other	belactosin A, belactosin C	Streptomyces sp.
BGC0000375.1	0.46	NRP	indigoidine	Streptomyces chromofuscus
BGC0000842.1	0.41	Other (Non-NRP beta-lactam)	carbapenem MM4550	Streptomyces argenteolus
BGC0000597.1	0.41	RiPP	SWA-2138	Streptomyces sp. e14
BGC0000805.1	0.41	Saccharide	moenomycin	Streptomyces viridosporus ATCC 14672
BGC0001411.1	0.41	Saccharide	polysaccharide B	Bacteroides fragilis
BGC0000979.1	0.41	NRP, Polyketide	cylindrospermopsin	Aphanizomenon sp. 10E9
BGC0000980.1	0.41	NRP, Polyketide	cylindrospermopsin	Aphanizomenon sp. 22D11

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

NZ_CP023536.1 - Region 3 - resorcinol

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Location: 3,581,324 - 3,622,475 nt. (total: 41,152 nt) Show pHMM detection rules used

resorcinol: DarB

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001526.1	0.21	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0000894.1	0.17	Other	citrinin	Monascus aurantiacus
BGC0001525.1	0.17	Other	bartoloside 2, bartoloside 3, bartoloside 4	Synechocystis salina LEGE 06155
BGC0000436.1	0.09	NRP	syringolin A	Rhizobium sp. AP16
BGC0000863.1	0.08	Other	eicosapentaenoic acid	Pseudoalteromonas sp. DS-12
BGC0000838.1	0.08	Polyketide	flexirubin	Flavobacterium johnsoniae UW101
BGC0001338.1	0.06	Polyketide	citrinin	Monascus ruber
BGC0000190.1	0.06	Polyketide	A-74528	Streptomyces sp. SANK 61196
BGC0000224.1	0.06	Polyketide	fredericamycin A	Streptomyces griseus
BGC0001983.1	0.06	Other	triacsins	Kitasatospora aureofaciens

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001526.1	0.53	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0000894.1	0.49	Other	citrinin	Monascus aurantiacus
BGC0001525.1	0.48	Other	bartoloside 2, bartoloside 3, bartoloside 4	Synechocystis salina LEGE 06155
BGC0000436.1	0.32	NRP	syringolin A	Rhizobium sp. AP16
BGC0000863.1	0.32	Other	eicosapentaenoic acid	Pseudoalteromonas sp. DS-12
BGC0000838.1	0.30	Polyketide	flexirubin	Flavobacterium johnsoniae UW101
BGC0001338.1	0.26	Polyketide	citrinin	Monascus ruber
BGC0000190.1	0.26	Polyketide	A-74528	Streptomyces sp. SANK 61196
BGC0000224.1	0.24	Polyketide	fredericamycin A	Streptomyces griseus
BGC0001983.1	0.24	Other	triacsins	Kitasatospora aureofaciens

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

NZ_CP023536.1 - Region 4 - thiopeptide

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Location: 3,714,133 - 3,740,355 nt. (total: 26,223 nt) Show pHMM detection rules used

thiopeptide: ((YcaO or TIGR03882) and ((thio_amide and (PF06968 or PF04055 or PF07366)) or Lant_dehydr_C or Lant_dehydr_N or PF07366 or PF06968 or PF04055) or thiostrepton)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Thiopeptides

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000554.1	0.21	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000617.1	0.20	RiPP	coagulin	Bacillus coagulans
BGC0000516.1	0.18	RiPP	geobacillin II	Geobacillus thermodenitrificans
BGC0000502.1	0.17	RiPP	cerecidin, cerecidin A1, cerecidin A2, cerecidin A3, cerecidin A4, cerecidin A5, cerecidin A6, cerecidin A7	Bacillus cereus
BGC0001289.1	0.16	RiPP	penisin	Paenibacillus ehimensis
BGC0000488.1	0.16	RiPP	circularin A	Clostridium beijerinckii
BGC0000487.1	0.16	RiPP	carnocyclin	Carnobacterium maltaromaticum
BGC0001210.1	0.16	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0000551.1	0.16	RiPP	SapB	Streptomyces coelicolor A3(2)
BGC0001391.1	0.16	RiPP	thusin	Bacillus thuringiensis serovar rongseni

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000554.1	0.54	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000617.1	0.53	RiPP	coagulin	Bacillus coagulans
BGC0000516.1	0.49	RiPP	geobacillin II	Geobacillus thermodenitrificans
BGC0000502.1	0.48	RiPP	cerecidin, cerecidin A1, cerecidin A2, cerecidin A3, cerecidin A4, cerecidin A5, cerecidin A6, cerecidin A7	Bacillus cereus
BGC0001289.1	0.47	RiPP	penisin	Paenibacillus ehimensis
BGC0000488.1	0.47	RiPP	circularin A	Clostridium beijerinckii
BGC0000487.1	0.47	RiPP	carnocyclin	Carnobacterium maltaromaticum
BGC0001210.1	0.46	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0000551.1	0.46	RiPP	SapB	Streptomyces coelicolor A3(2)
BGC0001391.1	0.46	RiPP	thusin	Bacillus thuringiensis serovar rongseni

Similar known gene clusters

No matches found.

Thiopeptide predictions

No core peptides found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

Thiopeptides

Core peptide predictions

No core peptides found.