GCF_900141895.1_IMG-taxon_2585427596_annotated_assembly_genomic - 3 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_FQYT01000010 (original name was: NZ_FQYT01000010.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	betalactone	36,933	69,204

NZ_FQYT01000002 (original name was: NZ_FQYT01000002.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	ranthipeptide	186,780	208,369

NZ_FQYT01000012 (original name was: NZ_FQYT01000012.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 46.1	cyclic-lactone-autoinducer	1	17,474

Region	Type	From	To	Similarity
Region 9.1	betalactone	36,933	69,204
Region 33.1	ranthipeptide	186,780	208,369
Region 46.1	cyclic-lactone-autoinducer	1	17,474

No secondary metabolite regions were found in these records:: NZ_FQYT01000053 (original name was: NZ_FQYT01000053.1); NZ_FQYT01000052 (original name was: NZ_FQYT01000052.1); NZ_FQYT01000049 (original name was: NZ_FQYT01000049.1); NZ_FQYT01000048 (original name was: NZ_FQYT01000048.1); NZ_FQYT01000022 (original name was: NZ_FQYT01000022.1); NZ_FQYT01000019 (original name was: NZ_FQYT01000019.1); NZ_FQYT01000018 (original name was: NZ_FQYT01000018.1); NZ_FQYT01000013 (original name was: NZ_FQYT01000013.1); NZ_FQYT01000023 (original name was: NZ_FQYT01000023.1); NZ_FQYT01000035 (original name was: NZ_FQYT01000035.1); NZ_FQYT01000015 (original name was: NZ_FQYT01000015.1); NZ_FQYT01000031 (original name was: NZ_FQYT01000031.1); NZ_FQYT01000017 (original name was: NZ_FQYT01000017.1); NZ_FQYT01000050 (original name was: NZ_FQYT01000050.1); NZ_FQYT01000003 (original name was: NZ_FQYT01000003.1); NZ_FQYT01000011 (original name was: NZ_FQYT01000011.1); NZ_FQYT01000038 (original name was: NZ_FQYT01000038.1); NZ_FQYT01000004 (original name was: NZ_FQYT01000004.1); NZ_FQYT01000047 (original name was: NZ_FQYT01000047.1); NZ_FQYT01000007 (original name was: NZ_FQYT01000007.1); NZ_FQYT01000014 (original name was: NZ_FQYT01000014.1); NZ_FQYT01000034 (original name was: NZ_FQYT01000034.1); NZ_FQYT01000006 (original name was: NZ_FQYT01000006.1); NZ_FQYT01000045 (original name was: NZ_FQYT01000045.1); NZ_FQYT01000008 (original name was: NZ_FQYT01000008.1); NZ_FQYT01000025 (original name was: NZ_FQYT01000025.1); NZ_FQYT01000037 (original name was: NZ_FQYT01000037.1); NZ_FQYT01000016 (original name was: NZ_FQYT01000016.1); NZ_FQYT01000009 (original name was: NZ_FQYT01000009.1); NZ_FQYT01000024 (original name was: NZ_FQYT01000024.1); NZ_FQYT01000026 (original name was: NZ_FQYT01000026.1); NZ_FQYT01000043 (original name was: NZ_FQYT01000043.1); NZ_FQYT01000027 (original name was: NZ_FQYT01000027.1); NZ_FQYT01000046 (original name was: NZ_FQYT01000046.1); NZ_FQYT01000028 (original name was: NZ_FQYT01000028.1); NZ_FQYT01000029 (original name was: NZ_FQYT01000029.1); NZ_FQYT01000020 (original name was: NZ_FQYT01000020.1); NZ_FQYT01000030 (original name was: NZ_FQYT01000030.1); NZ_FQYT01000005 (original name was: NZ_FQYT01000005.1); NZ_FQYT01000032 (original name was: NZ_FQYT01000032.1); NZ_FQYT01000021 (original name was: NZ_FQYT01000021.1); NZ_FQYT01000033 (original name was: NZ_FQYT01000033.1); NZ_FQYT01000040 (original name was: NZ_FQYT01000040.1); NZ_FQYT01000044 (original name was: NZ_FQYT01000044.1); NZ_FQYT01000051 (original name was: NZ_FQYT01000051.1); NZ_FQYT01000036 (original name was: NZ_FQYT01000036.1); NZ_FQYT01000041 (original name was: NZ_FQYT01000041.1); NZ_FQYT01000039 (original name was: NZ_FQYT01000039.1); NZ_FQYT01000042 (original name was: NZ_FQYT01000042.1)

Compact view

c00009_NZ_FQYT.. - Region 1 - betalactone

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Location: 36,933 - 69,204 nt. (total: 32,272 nt) Show pHMM detection rules used

betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000484.1	0.21	RiPP	glycocin F	Lactobacillus plantarum
BGC0001862.1	0.20	RiPP	geocillicin	Aeribacillus pallidus
BGC0001930.1	0.20	RiPP	pallidocin	Aeribacillus pallidus
BGC0000234.1	0.18	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0000509.1	0.17	RiPP	epilancin 15x	Staphylococcus epidermidis
BGC0000938.1	0.17	Other (Aminocoumarin)	fosfomycin	Streptomyces fradiae
BGC0000554.1	0.17	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001173.1	0.16	RiPP	plantazolicin	Bacillus pumilus ATCC 7061
BGC0001525.1	0.16	Other	bartoloside 2, bartoloside 3, bartoloside 4	Synechocystis salina LEGE 06155
BGC0001526.1	0.16	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000484.1	0.54	RiPP	glycocin F	Lactobacillus plantarum
BGC0001862.1	0.52	RiPP	geocillicin	Aeribacillus pallidus
BGC0001930.1	0.52	RiPP	pallidocin	Aeribacillus pallidus
BGC0000234.1	0.49	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0000509.1	0.49	RiPP	epilancin 15x	Staphylococcus epidermidis
BGC0000938.1	0.48	Other (Aminocoumarin)	fosfomycin	Streptomyces fradiae
BGC0000554.1	0.47	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0001173.1	0.47	RiPP	plantazolicin	Bacillus pumilus ATCC 7061
BGC0001525.1	0.47	Other	bartoloside 2, bartoloside 3, bartoloside 4	Synechocystis salina LEGE 06155
BGC0001526.1	0.47	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00033_NZ_FQYT.. - Region 1 - ranthipeptide

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Location: 186,780 - 208,369 nt. (total: 21,590 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001618.1	0.18	RiPP	hyicin 3682	Staphylococcus hyicus
BGC0000508.1	0.18	RiPP	epidermin	Staphylococcus epidermidis
BGC0001120.1	0.17	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0001551.1	0.16	RiPP	citrulassin E	Streptomyces glaucescens
BGC0000517.1	0.16	RiPP	haloduracin β, haloduracin α	Bacillus halodurans C-125
BGC0000504.1	0.15	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000616.1	0.15	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0000560.1	0.15	RiPP	subtilomycin	Bacillus subtilis
BGC0000807.1	0.15	Saccharide	phosphonoglycans	Stackebrandtia nassauensis DSM 44728
BGC0000530.1	0.15	RiPP	mutacin B-Ny266	Streptococcus mutans N66

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001618.1	0.50	RiPP	hyicin 3682	Staphylococcus hyicus
BGC0000508.1	0.49	RiPP	epidermin	Staphylococcus epidermidis
BGC0001120.1	0.49	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264
BGC0001551.1	0.46	RiPP	citrulassin E	Streptomyces glaucescens
BGC0000517.1	0.46	RiPP	haloduracin β, haloduracin α	Bacillus halodurans C-125
BGC0000504.1	0.46	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000616.1	0.45	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0000560.1	0.45	RiPP	subtilomycin	Bacillus subtilis
BGC0000807.1	0.45	Saccharide	phosphonoglycans	Stackebrandtia nassauensis DSM 44728
BGC0000530.1	0.44	RiPP	mutacin B-Ny266	Streptococcus mutans N66

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

c00046_NZ_FQYT.. - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 17,474 nt. (total: 17,474 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001586.1	0.14	Saccharide	EPS273	Pseudomonas stutzeri
BGC0000607.1	0.12	RiPP	micrococcin P1	Macrococcus caseolyticus
BGC0001686.1	0.08	NRP	N-octanoyl-Met-Phe-H	Clostridium sp. CAG:567
BGC0001890.1	0.05	NRP	amphi-enterobactin 1, amphi-enterobactin 2, amphi-enterobactin 3, amphi-enterobactin 4	Vibrio campbellii ATCC BAA-1116
BGC0001096.1	0.04	NRP, Polyketide	FR901464	Pseudomonas sp. 2663
BGC0000995.1	0.04	NRP, Polyketide	FR901464	Pseudomonas sp. 2663

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001586.1	0.44	Saccharide	EPS273	Pseudomonas stutzeri
BGC0000607.1	0.40	RiPP	micrococcin P1	Macrococcus caseolyticus
BGC0001686.1	0.31	NRP	N-octanoyl-Met-Phe-H	Clostridium sp. CAG:567
BGC0001890.1	0.23	NRP	amphi-enterobactin 1, amphi-enterobactin 2, amphi-enterobactin 3, amphi-enterobactin 4	Vibrio campbellii ATCC BAA-1116
BGC0001096.1	0.19	NRP, Polyketide	FR901464	Pseudomonas sp. 2663
BGC0000995.1	0.19	NRP, Polyketide	FR901464	Pseudomonas sp. 2663

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names