GCF_027667425.1_ASM2766742v1_genomic - 5 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

c00002_NZ_JAQE.. (original name was: NZ_JAQEGR010000010.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	ranthipeptide	85,557	106,915

c00006_NZ_JAQE.. (original name was: NZ_JAQEGR010000014.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	ranthipeptide	1	19,276

c00012_NZ_JAQE.. (original name was: NZ_JAQEGR010000002.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	RRE-containing	156,826	177,164

c00023_NZ_JAQE.. (original name was: NZ_JAQEGR010000003.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	RRE-containing	42,987	81,844
Region 23.2	cyclic-lactone-autoinducer	129,204	149,964

Region	Type	From	To	Similarity
Region 2.1	ranthipeptide	85,557	106,915
Region 6.1	ranthipeptide	1	19,276
Region 12.1	RRE-containing	156,826	177,164
Region 23.1	RRE-containing	42,987	81,844
Region 23.2	cyclic-lactone-autoinducer	129,204	149,964

No secondary metabolite regions were found in these records:: c00001_NZ_JAQE.. (original name was: NZ_JAQEGR010000001.1); c00003_NZ_JAQE.. (original name was: NZ_JAQEGR010000011.1); c00004_NZ_JAQE.. (original name was: NZ_JAQEGR010000012.1); c00005_NZ_JAQE.. (original name was: NZ_JAQEGR010000013.1); c00007_NZ_JAQE.. (original name was: NZ_JAQEGR010000015.1); c00008_NZ_JAQE.. (original name was: NZ_JAQEGR010000016.1); c00009_NZ_JAQE.. (original name was: NZ_JAQEGR010000017.1); c00010_NZ_JAQE.. (original name was: NZ_JAQEGR010000018.1); c00011_NZ_JAQE.. (original name was: NZ_JAQEGR010000019.1); c00013_NZ_JAQE.. (original name was: NZ_JAQEGR010000020.1); c00014_NZ_JAQE.. (original name was: NZ_JAQEGR010000021.1); c00015_NZ_JAQE.. (original name was: NZ_JAQEGR010000022.1); c00016_NZ_JAQE.. (original name was: NZ_JAQEGR010000023.1); c00017_NZ_JAQE.. (original name was: NZ_JAQEGR010000024.1); c00018_NZ_JAQE.. (original name was: NZ_JAQEGR010000025.1); c00019_NZ_JAQE.. (original name was: NZ_JAQEGR010000026.1); c00020_NZ_JAQE.. (original name was: NZ_JAQEGR010000027.1); c00021_NZ_JAQE.. (original name was: NZ_JAQEGR010000028.1); c00022_NZ_JAQE.. (original name was: NZ_JAQEGR010000029.1); c00024_NZ_JAQE.. (original name was: NZ_JAQEGR010000030.1); c00025_NZ_JAQE.. (original name was: NZ_JAQEGR010000031.1); c00026_NZ_JAQE.. (original name was: NZ_JAQEGR010000032.1); c00027_NZ_JAQE.. (original name was: NZ_JAQEGR010000033.1); c00028_NZ_JAQE.. (original name was: NZ_JAQEGR010000034.1); c00029_NZ_JAQE.. (original name was: NZ_JAQEGR010000035.1); c00030_NZ_JAQE.. (original name was: NZ_JAQEGR010000036.1); c00031_NZ_JAQE.. (original name was: NZ_JAQEGR010000037.1); c00032_NZ_JAQE.. (original name was: NZ_JAQEGR010000038.1); c00033_NZ_JAQE.. (original name was: NZ_JAQEGR010000039.1); c00034_NZ_JAQE.. (original name was: NZ_JAQEGR010000004.1); c00035_NZ_JAQE.. (original name was: NZ_JAQEGR010000040.1); c00036_NZ_JAQE.. (original name was: NZ_JAQEGR010000041.1); c00037_NZ_JAQE.. (original name was: NZ_JAQEGR010000042.1); c00038_NZ_JAQE.. (original name was: NZ_JAQEGR010000043.1); c00039_NZ_JAQE.. (original name was: NZ_JAQEGR010000044.1); c00040_NZ_JAQE.. (original name was: NZ_JAQEGR010000045.1); c00041_NZ_JAQE.. (original name was: NZ_JAQEGR010000005.1); c00042_NZ_JAQE.. (original name was: NZ_JAQEGR010000006.1); c00043_NZ_JAQE.. (original name was: NZ_JAQEGR010000007.1); c00044_NZ_JAQE.. (original name was: NZ_JAQEGR010000008.1); c00045_NZ_JAQE.. (original name was: NZ_JAQEGR010000009.1)

Compact view

c00002_NZ_JAQE.. - Region 1 - ranthipeptide

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Location: 85,557 - 106,915 nt. (total: 21,359 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001387.1	0.16	Other	nucleocidin	Streptomyces calvus
BGC0001540.1	0.15	Other	CC-1065	Streptomyces zelensis
BGC0001607.1	0.15	Other	gilvusmycin	Streptomyces sp. NRRL B-1347
BGC0000466.1	0.13	NRP	yatakemycin	Streptomyces sp. TP-A2060
BGC0000695.1	0.12	Saccharide	fortimicin	Micromonospora olivasterospora
BGC0000807.1	0.12	Saccharide	phosphonoglycans	Stackebrandtia nassauensis DSM 44728
BGC0001591.1	0.10	Other	fatty acid enol ester	uncultured bacterium CSLC2
BGC0001688.1	0.10	Other	N-tetradecanoyl tyrosine	uncultured bacterium CSLC2
BGC0001155.1	0.08	RiPP	GE2270	Planobispora rosea
BGC0000628.1	0.08	RiPP	lactocillin	Lactobacillus paragasseri JV-V03

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001387.1	0.47	Other	nucleocidin	Streptomyces calvus
BGC0001540.1	0.45	Other	CC-1065	Streptomyces zelensis
BGC0001607.1	0.44	Other	gilvusmycin	Streptomyces sp. NRRL B-1347
BGC0000466.1	0.42	NRP	yatakemycin	Streptomyces sp. TP-A2060
BGC0000695.1	0.40	Saccharide	fortimicin	Micromonospora olivasterospora
BGC0000807.1	0.40	Saccharide	phosphonoglycans	Stackebrandtia nassauensis DSM 44728
BGC0001591.1	0.36	Other	fatty acid enol ester	uncultured bacterium CSLC2
BGC0001688.1	0.36	Other	N-tetradecanoyl tyrosine	uncultured bacterium CSLC2
BGC0001155.1	0.32	RiPP	GE2270	Planobispora rosea
BGC0000628.1	0.30	RiPP	lactocillin	Lactobacillus paragasseri JV-V03

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00006_NZ_JAQE.. - Region 1 - ranthipeptide

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Location: 1 - 19,276 nt. (total: 19,276 nt) Show pHMM detection rules used

Region on contig edge.

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000600.1	0.16	RiPP	thurincin H	Bacillus thuringiensis
BGC0001526.1	0.16	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0000626.1	0.16	RiPP	thuricin	Bacillus thuringiensis
BGC0000616.1	0.16	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0000501.1	0.16	RiPP	catenulipeptin	Catenulispora acidiphila DSM 44928
BGC0000563.1	0.16	RiPP	venezuelin	Streptomyces venezuelae ATCC 10712
BGC0000539.1	0.15	RiPP	nukacin ISK-1	Staphylococcus warneri
BGC0001639.1	0.15	RiPP	klebsidin	Klebsiella pneumoniae
BGC0000294.1	0.15	NRP	acinetobactin	Acinetobacter baumannii
BGC0000521.1	0.15	RiPP	lacticin 481	Lactococcus lactis subsp. lactis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000600.1	0.47	RiPP	thurincin H	Bacillus thuringiensis
BGC0001526.1	0.47	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0000626.1	0.46	RiPP	thuricin	Bacillus thuringiensis
BGC0000616.1	0.46	RiPP	amylocyclicin	Bacillus velezensis FZB42
BGC0000501.1	0.46	RiPP	catenulipeptin	Catenulispora acidiphila DSM 44928
BGC0000563.1	0.46	RiPP	venezuelin	Streptomyces venezuelae ATCC 10712
BGC0000539.1	0.46	RiPP	nukacin ISK-1	Staphylococcus warneri
BGC0001639.1	0.46	RiPP	klebsidin	Klebsiella pneumoniae
BGC0000294.1	0.46	NRP	acinetobactin	Acinetobacter baumannii
BGC0000521.1	0.45	RiPP	lacticin 481	Lactococcus lactis subsp. lactis

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

c00012_NZ_JAQE.. - Region 1 - RRE-containing

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Location: 156,826 - 177,164 nt. (total: 20,339 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001551.1	0.23	RiPP	citrulassin E	Streptomyces glaucescens
BGC0001485.1	0.18	Other	3-demethylchuangxinmycin	Actinoplanes tsinanensis
BGC0001546.1	0.18	Alkaloid	chuangxinmycin	Actinoplanes tsinanensis
BGC0000938.1	0.18	Other (Aminocoumarin)	fosfomycin	Streptomyces fradiae
BGC0001496.1	0.16	RiPP	actinokineosin	Actinokineospora spheciospongiae
BGC0000551.1	0.16	RiPP	SapB	Streptomyces coelicolor A3(2)
BGC0001525.1	0.16	Other	bartoloside 2, bartoloside 3, bartoloside 4	Synechocystis salina LEGE 06155
BGC0001526.1	0.16	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0000575.1	0.16	RiPP	lariatin	Rhodococcus jostii
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001551.1	0.56	RiPP	citrulassin E	Streptomyces glaucescens
BGC0001485.1	0.49	Other	3-demethylchuangxinmycin	Actinoplanes tsinanensis
BGC0001546.1	0.49	Alkaloid	chuangxinmycin	Actinoplanes tsinanensis
BGC0000938.1	0.49	Other (Aminocoumarin)	fosfomycin	Streptomyces fradiae
BGC0001496.1	0.47	RiPP	actinokineosin	Actinokineospora spheciospongiae
BGC0000551.1	0.47	RiPP	SapB	Streptomyces coelicolor A3(2)
BGC0001525.1	0.47	Other	bartoloside 2, bartoloside 3, bartoloside 4	Synechocystis salina LEGE 06155
BGC0001526.1	0.47	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0000575.1	0.47	RiPP	lariatin	Rhodococcus jostii
BGC0000554.1	0.46	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

c00023_NZ_JAQE.. - Region 1 - RRE-containing

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Location: 42,987 - 81,844 nt. (total: 38,858 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000792.1	0.27	Saccharide	polysaccharide	Enterococcus faecalis OG1RF
BGC0001551.1	0.22	RiPP	citrulassin E	Streptomyces glaucescens
BGC0000895.1	0.19	Other	citrulline	Lactobacillus plantarum subsp. plantarum
BGC0000592.1	0.16	RiPP	microviridin B	Microcystis aeruginosa NIES-298
BGC0000766.1	0.15	Saccharide	exopolysaccharide	Lactobacillus johnsonii
BGC0000868.1	0.15	Other	teichuronic acid	Bacillus subtilis subsp. subtilis str. 168
BGC0000554.1	0.15	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000777.1	0.15	Saccharide	lipopolysaccharide	Escherichia coli
BGC0000765.1	0.15	Saccharide	exopolysaccharide	Lactobacillus johnsonii
BGC0001120.1	0.14	NRP, Polyketide	burkholderic acid	Burkholderia thailandensis E264

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001551.1	0.55	RiPP	citrulassin E	Streptomyces glaucescens
BGC0000554.1	0.52	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000796.1	0.51	Saccharide	S-layer glycan	Paenibacillus alvei
BGC0000895.1	0.51	Other	citrulline	Lactobacillus plantarum subsp. plantarum
BGC0001229.1	0.49	RiPP	SBI-06990 A1, SBI-06989 A2	Streptomyces bingchenggensis BCW-1
BGC0000517.1	0.49	RiPP	haloduracin β, haloduracin α	Bacillus halodurans C-125
BGC0001889.1	0.49	RiPP	fusilassin	Thermobifida fusca YX
BGC0000692.1	0.47	Saccharide	apramycin	Streptoalloteichus hindustanus
BGC0000839.1	0.47	Other	flexirubin	Chitinophaga pinensis DSM 2588
BGC0000807.1	0.46	Saccharide	phosphonoglycans	Stackebrandtia nassauensis DSM 44728

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names

c00023_NZ_JAQE.. - Region 2 - cyclic-lactone-autoinducer

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Location: 129,204 - 149,964 nt. (total: 20,761 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000488.1	0.20	RiPP	circularin A	Clostridium beijerinckii
BGC0000602.1	0.19	RiPP	subtilosin A	Bacillus subtilis subsp. spizizenii ATCC 6633
BGC0000539.1	0.19	RiPP	nukacin ISK-1	Staphylococcus warneri
BGC0000521.1	0.18	RiPP	lacticin 481	Lactococcus lactis subsp. lactis
BGC0001210.1	0.18	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0000514.1	0.18	RiPP	gallidermin	Staphylococcus gallinarum
BGC0001618.1	0.18	RiPP	hyicin 3682	Staphylococcus hyicus
BGC0001311.1	0.18	RiPP	flavecins	Ruminococcus flavefaciens FD-1
BGC0000541.1	0.17	RiPP	paenicidin A	Paenibacillus polymyxa
BGC0001391.1	0.17	RiPP	thusin	Bacillus thuringiensis serovar rongseni

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000488.1	0.52	RiPP	circularin A	Clostridium beijerinckii
BGC0000602.1	0.52	RiPP	subtilosin A	Bacillus subtilis subsp. spizizenii ATCC 6633
BGC0000539.1	0.50	RiPP	nukacin ISK-1	Staphylococcus warneri
BGC0000521.1	0.50	RiPP	lacticin 481	Lactococcus lactis subsp. lactis
BGC0001210.1	0.50	RiPP	pseudomycoicidin	Bacillus pseudomycoides DSM 12442
BGC0000514.1	0.50	RiPP	gallidermin	Staphylococcus gallinarum
BGC0001618.1	0.50	RiPP	hyicin 3682	Staphylococcus hyicus
BGC0001311.1	0.49	RiPP	flavecins	Ruminococcus flavefaciens FD-1
BGC0000541.1	0.48	RiPP	paenicidin A	Paenibacillus polymyxa
BGC0001391.1	0.48	RiPP	thusin	Bacillus thuringiensis serovar rongseni

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

Expand to show all names

Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names