GCF_000426305.1_ASM42630v1_genomic - 4 region(s)

Identified secondary metabolite regions using strictness 'relaxed'

NZ_AUFC01000002 (original name was: NZ_AUFC01000002.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	ranthipeptide	146,931	168,571

NZ_KE384519.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	betalactone	67,059	99,548

NZ_AUFC01000016 (original name was: NZ_AUFC01000016.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	cyclic-lactone-autoinducer	3,750	24,340

NZ_AUFC01000027 (original name was: NZ_AUFC01000027.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 24.1	betalactone	1	22,794

Region	Type	From	To	Similarity
Region 2.1	ranthipeptide	146,931	168,571
Region 5.1	betalactone	67,059	99,548
Region 13.1	cyclic-lactone-autoinducer	3,750	24,340
Region 24.1	betalactone	1	22,794

No secondary metabolite regions were found in these records:: NZ_AUFC01000001 (original name was: NZ_AUFC01000001.1); NZ_KE384518.1; NZ_AUFC01000005 (original name was: NZ_AUFC01000005.1); NZ_AUFC01000008 (original name was: NZ_AUFC01000008.1); NZ_AUFC01000009 (original name was: NZ_AUFC01000009.1); NZ_KE384520.1; NZ_AUFC01000012 (original name was: NZ_AUFC01000012.1); NZ_AUFC01000013 (original name was: NZ_AUFC01000013.1); NZ_AUFC01000014 (original name was: NZ_AUFC01000014.1); NZ_AUFC01000015 (original name was: NZ_AUFC01000015.1); NZ_AUFC01000017 (original name was: NZ_AUFC01000017.1); NZ_AUFC01000018 (original name was: NZ_AUFC01000018.1); NZ_AUFC01000019 (original name was: NZ_AUFC01000019.1); NZ_AUFC01000020 (original name was: NZ_AUFC01000020.1); NZ_AUFC01000021 (original name was: NZ_AUFC01000021.1); NZ_AUFC01000022 (original name was: NZ_AUFC01000022.1); NZ_AUFC01000023 (original name was: NZ_AUFC01000023.1); NZ_AUFC01000024 (original name was: NZ_AUFC01000024.1); NZ_AUFC01000025 (original name was: NZ_AUFC01000025.1); NZ_AUFC01000026 (original name was: NZ_AUFC01000026.1); NZ_AUFC01000028 (original name was: NZ_AUFC01000028.1); NZ_AUFC01000029 (original name was: NZ_AUFC01000029.1); NZ_AUFC01000030 (original name was: NZ_AUFC01000030.1); NZ_AUFC01000031 (original name was: NZ_AUFC01000031.1); NZ_AUFC01000032 (original name was: NZ_AUFC01000032.1); NZ_AUFC01000033 (original name was: NZ_AUFC01000033.1); NZ_AUFC01000034 (original name was: NZ_AUFC01000034.1); NZ_AUFC01000035 (original name was: NZ_AUFC01000035.1); NZ_AUFC01000036 (original name was: NZ_AUFC01000036.1); NZ_AUFC01000037 (original name was: NZ_AUFC01000037.1); NZ_AUFC01000038 (original name was: NZ_AUFC01000038.1); NZ_AUFC01000039 (original name was: NZ_AUFC01000039.1); NZ_AUFC01000040 (original name was: NZ_AUFC01000040.1); NZ_AUFC01000041 (original name was: NZ_AUFC01000041.1); NZ_AUFC01000042 (original name was: NZ_AUFC01000042.1); NZ_AUFC01000043 (original name was: NZ_AUFC01000043.1); NZ_AUFC01000044 (original name was: NZ_AUFC01000044.1); NZ_AUFC01000045 (original name was: NZ_AUFC01000045.1); NZ_AUFC01000046 (original name was: NZ_AUFC01000046.1); NZ_AUFC01000047 (original name was: NZ_AUFC01000047.1); NZ_AUFC01000048 (original name was: NZ_AUFC01000048.1); NZ_AUFC01000049 (original name was: NZ_AUFC01000049.1); NZ_AUFC01000050 (original name was: NZ_AUFC01000050.1); NZ_AUFC01000051 (original name was: NZ_AUFC01000051.1); NZ_AUFC01000052 (original name was: NZ_AUFC01000052.1); NZ_AUFC01000053 (original name was: NZ_AUFC01000053.1); NZ_AUFC01000054 (original name was: NZ_AUFC01000054.1); NZ_AUFC01000055 (original name was: NZ_AUFC01000055.1); NZ_AUFC01000056 (original name was: NZ_AUFC01000056.1); NZ_AUFC01000057 (original name was: NZ_AUFC01000057.1)

Compact view

c00002_NZ_AUFC.. - Region 1 - ranthipeptide

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Location: 146,931 - 168,571 nt. (total: 21,641 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001285.1	0.25	Other (Fatty acid)	pseudopyronine A, pseudopyronine B	Pseudomonas putida
BGC0001526.1	0.20	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0000938.1	0.19	Other (Aminocoumarin)	fosfomycin	Streptomyces fradiae
BGC0001525.1	0.19	Other	bartoloside 2, bartoloside 3, bartoloside 4	Synechocystis salina LEGE 06155
BGC0000249.1	0.18	Polyketide	nogalamycin	Streptomyces nogalater
BGC0000243.1	0.17	Polyketide	macrotetrolide	Streptomyces griseus subsp. griseus
BGC0001498.1	0.16	Other	aerobactin	Xenorhabdus szentirmaii DSM 16338
BGC0000504.1	0.16	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000571.1	0.16	RiPP	burhizin	Paraburkholderia rhizoxinica HKI 454
BGC0001591.1	0.16	Other	fatty acid enol ester	uncultured bacterium CSLC2

Reference	Similarity score	Type	Compound(s)	Organism
BGC0001285.1	0.59	Other (Fatty acid)	pseudopyronine A, pseudopyronine B	Pseudomonas putida
BGC0001526.1	0.52	Other	bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K	Synechocystis salina LEGE 06099
BGC0000938.1	0.51	Other (Aminocoumarin)	fosfomycin	Streptomyces fradiae
BGC0001525.1	0.51	Other	bartoloside 2, bartoloside 3, bartoloside 4	Synechocystis salina LEGE 06155
BGC0000249.1	0.49	Polyketide	nogalamycin	Streptomyces nogalater
BGC0000243.1	0.48	Polyketide	macrotetrolide	Streptomyces griseus subsp. griseus
BGC0001498.1	0.47	Other	aerobactin	Xenorhabdus szentirmaii DSM 16338
BGC0000504.1	0.47	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000571.1	0.47	RiPP	burhizin	Paraburkholderia rhizoxinica HKI 454
BGC0001591.1	0.47	Other	fatty acid enol ester	uncultured bacterium CSLC2

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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NZ_KE384519.1 - Region 1 - betalactone

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Location: 67,059 - 99,548 nt. (total: 32,490 nt) Show pHMM detection rules used

betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000234.1	0.21	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0000880.1	0.18	Other (Nucleoside)	tunicamycin B1	Streptomyces chartreusis NRRL 3882
BGC0000601.1	0.16	RiPP	sporulation killing factor	Bacillus subtilis subsp. subtilis str. 168
BGC0001343.1	0.16	Polyketide	aurachin A, aurachin D	Stigmatella aurantiaca Sg a15
BGC0000554.1	0.16	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000504.1	0.16	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000509.1	0.16	RiPP	epilancin 15x	Staphylococcus epidermidis
BGC0000500.1	0.16	RiPP	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum
BGC0000555.1	0.16	RiPP	staphylococcin C55 α, staphylococcin C55 β	Staphylococcus aureus
BGC0000261.1	0.16	Polyketide	R1128	Streptomyces sp. R1128

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000234.1	0.53	Polyketide	jadomycin	Streptomyces venezuelae ATCC 10712
BGC0000880.1	0.50	Other (Nucleoside)	tunicamycin B1	Streptomyces chartreusis NRRL 3882
BGC0000601.1	0.47	RiPP	sporulation killing factor	Bacillus subtilis subsp. subtilis str. 168
BGC0001343.1	0.47	Polyketide	aurachin A, aurachin D	Stigmatella aurantiaca Sg a15
BGC0000554.1	0.47	RiPP	SRO15-3108	Streptomyces filamentosus NRRL 15998
BGC0000504.1	0.46	RiPP	cytolysin ClyLl, cytolysin ClyLs	Plasmid pAD1
BGC0000509.1	0.46	RiPP	epilancin 15x	Staphylococcus epidermidis
BGC0000500.1	0.46	RiPP	carnolysin A1, carnolysin A2	Carnobacterium maltaromaticum
BGC0000555.1	0.46	RiPP	staphylococcin C55 α, staphylococcin C55 β	Staphylococcus aureus
BGC0000261.1	0.46	Polyketide	R1128	Streptomyces sp. R1128

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00013_NZ_AUFC.. - Region 1 - cyclic-lactone-autoinducer

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Location: 3,750 - 24,340 nt. (total: 20,591 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000294.1	0.15	NRP	acinetobactin	Acinetobacter baumannii
BGC0001283.1	0.05	Polyketide	arsono-polyketide	Streptomyces lividans 1326
BGC0000354.1	0.03	NRP	friulimicin A, friulimicin B, friulimicin C, friulimicin D	Actinoplanes friuliensis

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000294.1	0.45	NRP	acinetobactin	Acinetobacter baumannii
BGC0001283.1	0.22	Polyketide	arsono-polyketide	Streptomyces lividans 1326
BGC0000354.1	0.16	NRP	friulimicin A, friulimicin B, friulimicin C, friulimicin D	Actinoplanes friuliensis

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

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c00024_NZ_AUFC.. - Region 1 - betalactone

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Location: 1 - 22,794 nt. (total: 22,794 nt) Show pHMM detection rules used

Region on contig edge.

betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

MIBiG comparison

KnownClusterBlast

Pfam domains

TIGRFAM domains

Similar gene clusters

Analysis type:

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000889.1	0.17	Other	bagremycin A, bagremycin B	Streptomyces sp. WK-5344
BGC0002029.1	0.16	Other	bagremycin A, bagremycin B, bagremycin C, bagremycin E, bagremycin F, bagremycin G, ferroverdin A, ferroverdin B, ferroverdin C	Streptomyces lunaelactis
BGC0001592.1	0.16	Other	ferroverdin	Streptomyces lunaelactis
BGC0000906.1	0.14	Other	heme D1	Heliophilum fasciatum
BGC0000905.1	0.14	Other	heme D1	Heliobacillus mobilis
BGC0001607.1	0.14	Other	gilvusmycin	Streptomyces sp. NRRL B-1347
BGC0000917.1	0.13	Other	molybdenum cofactor	Rhodobacter capsulatus
BGC0000883.1	0.13	Other	arginomycin	Streptomyces arginensis
BGC0000695.1	0.12	Saccharide	fortimicin	Micromonospora olivasterospora
BGC0000916.1	0.10	Other	molybdenum cofactor	Staphylococcus carnosus

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000889.1	0.48	Other	bagremycin A, bagremycin B	Streptomyces sp. WK-5344
BGC0002029.1	0.46	Other	bagremycin A, bagremycin B, bagremycin C, bagremycin E, bagremycin F, bagremycin G, ferroverdin A, ferroverdin B, ferroverdin C	Streptomyces lunaelactis
BGC0001592.1	0.46	Other	ferroverdin	Streptomyces lunaelactis
BGC0000906.1	0.44	Other	heme D1	Heliophilum fasciatum
BGC0000905.1	0.43	Other	heme D1	Heliobacillus mobilis
BGC0001607.1	0.43	Other	gilvusmycin	Streptomyces sp. NRRL B-1347
BGC0000917.1	0.42	Other	molybdenum cofactor	Rhodobacter capsulatus
BGC0000883.1	0.42	Other	arginomycin	Streptomyces arginensis
BGC0000695.1	0.39	Saccharide	fortimicin	Micromonospora olivasterospora
BGC0000916.1	0.36	Other	molybdenum cofactor	Staphylococcus carnosus

Similar known gene clusters

No matches found.

Detailed Pfam domain annotation

Selected features only

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Detailed TIGRFAM domain annotation

Selected features only

Expand to show all names