GCF_003992115.1_ASM399211v1_genomic - 2 region(s)

Region	Type	From	To	Most similar known cluster	Similarity
Region 15.1	hserlactone	1	17,059

Region

Type

From

Most similar known cluster

Similarity

Region 15.1

hserlactone

17,059

Region	Type	From	To	Most similar known cluster	Similarity
Region 16.1	ranthipeptide	34,392	50,888

Region

Type

From

Most similar known cluster

Similarity

Region 16.1

ranthipeptide

34,392

50,888

Region	Type	From	To	Most similar known cluster	Similarity
Region 15.1	hserlactone	1	17,059
Region 16.1	ranthipeptide	34,392	50,888

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000207.1	0.13	Polyketide	chartreusin	Streptomyces chartreusis
BGC0001150.1	0.13	Polyketide	pamamycin-607	Streptomyces alboniger
BGC0000892.1	0.13	Other	caryoynencin	Burkholderia gladioli BSR3
BGC0001446.1	0.08	Polyketide	asparasone A	Aspergillus flavus NRRL3357
BGC0001895.1	0.05	Polyketide	huanglongmycin A, huanglongmycin B, huanglongmycin C	Streptomyces sp. CB09001
BGC0002000.1	0.05	Polyketide	setomimycin	Streptomyces aurantiacus JA 4570
BGC0001538.1	0.05	NRP, Polyketide	caboxamycin	Streptomyces sp. NTK 937
BGC0001591.1	0.05	Other	fatty acid enol ester	uncultured bacterium CSLC2
BGC0001688.1	0.05	Other	N-tetradecanoyl tyrosine	uncultured bacterium CSLC2
BGC0000914.1	0.05	Other	methylenomycin A	Streptomyces coelicolor A3(2)

Reference

hserlactone

Similarity score

Type

Compound(s)

Organism

BGC0000207.1

0.13

Polyketide

chartreusin

Streptomyces chartreusis

BGC0001150.1

0.13

Polyketide

pamamycin-607

Streptomyces alboniger

BGC0000892.1

0.13

Other

caryoynencin

Burkholderia gladioli BSR3

BGC0001446.1

0.08

Polyketide

asparasone A

Aspergillus flavus NRRL3357

BGC0001895.1

0.05

Polyketide

huanglongmycin A, huanglongmycin B, huanglongmycin C

Streptomyces sp. CB09001

BGC0002000.1

0.05

Polyketide

setomimycin

Streptomyces aurantiacus JA 4570

BGC0001538.1

0.05

NRP, Polyketide

caboxamycin

Streptomyces sp. NTK 937

BGC0001591.1

0.05

Other

fatty acid enol ester

uncultured bacterium CSLC2

BGC0001688.1

0.05

Other

N-tetradecanoyl tyrosine

uncultured bacterium CSLC2

BGC0000914.1

0.05

Other

methylenomycin A

Streptomyces coelicolor A3(2)

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000207.1	0.42	Polyketide	chartreusin	Streptomyces chartreusis
BGC0001150.1	0.41	Polyketide	pamamycin-607	Streptomyces alboniger
BGC0000892.1	0.41	Other	caryoynencin	Burkholderia gladioli BSR3
BGC0001446.1	0.31	Polyketide	asparasone A	Aspergillus flavus NRRL3357
BGC0001895.1	0.23	Polyketide	huanglongmycin A, huanglongmycin B, huanglongmycin C	Streptomyces sp. CB09001
BGC0002000.1	0.23	Polyketide	setomimycin	Streptomyces aurantiacus JA 4570
BGC0001538.1	0.23	NRP, Polyketide	caboxamycin	Streptomyces sp. NTK 937
BGC0001591.1	0.22	Other	fatty acid enol ester	uncultured bacterium CSLC2
BGC0001688.1	0.22	Other	N-tetradecanoyl tyrosine	uncultured bacterium CSLC2
BGC0000914.1	0.22	Other	methylenomycin A	Streptomyces coelicolor A3(2)

Reference

Aggregated

Similarity score

Type

Compound(s)

Organism

BGC0000207.1

0.42

Polyketide

chartreusin

Streptomyces chartreusis

BGC0001150.1

0.41

Polyketide

pamamycin-607

Streptomyces alboniger

BGC0000892.1

0.41

Other

caryoynencin

Burkholderia gladioli BSR3

BGC0001446.1

0.31

Polyketide

asparasone A

Aspergillus flavus NRRL3357

BGC0001895.1

0.23

Polyketide

huanglongmycin A, huanglongmycin B, huanglongmycin C

Streptomyces sp. CB09001

BGC0002000.1

0.23

Polyketide

setomimycin

Streptomyces aurantiacus JA 4570

BGC0001538.1

0.23

NRP, Polyketide

caboxamycin

Streptomyces sp. NTK 937

BGC0001591.1

0.22

Other

fatty acid enol ester

uncultured bacterium CSLC2

BGC0001688.1

0.22

Other

N-tetradecanoyl tyrosine

uncultured bacterium CSLC2

BGC0000914.1

0.22

Other

methylenomycin A

Streptomyces coelicolor A3(2)

c00016_NZ_RQUX.. - Region 1 - ranthipeptide

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Location: 34,392 - 50,888 nt. (total: 16,497 nt) Show pHMM detection rules used

Region on contig edge.

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

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Reference	Similarity score	Type	Compound(s)	Organism
BGC0000207.1	0.13	Polyketide	chartreusin	Streptomyces chartreusis
BGC0000599.1	0.12	RiPP	thuricin CD α, thuricin CD β	Bacillus thuringiensis
BGC0001555.1	0.03	RiPP	colicin V	Escherichia coli chi7122
BGC0000259.1	0.03	Polyketide	prodigiosin	Serratia marcescens
BGC0000413.1	0.03	NRP	pyoverdin	Pseudomonas protegens Pf-5

Reference

ranthipeptide

Similarity score

Type

Compound(s)

Organism

BGC0000207.1

0.13

Polyketide

chartreusin

Streptomyces chartreusis

BGC0000599.1

0.12

RiPP

thuricin CD α, thuricin CD β

Bacillus thuringiensis

BGC0001555.1

0.03

RiPP

colicin V

Escherichia coli chi7122

BGC0000259.1

0.03

Polyketide

prodigiosin

Serratia marcescens

BGC0000413.1

0.03

NRP

pyoverdin

Pseudomonas protegens Pf-5

Reference	Similarity score	Type	Compound(s)	Organism
BGC0000207.1	0.42	Polyketide	chartreusin	Streptomyces chartreusis
BGC0000599.1	0.40	RiPP	thuricin CD α, thuricin CD β	Bacillus thuringiensis
BGC0001555.1	0.15	RiPP	colicin V	Escherichia coli chi7122
BGC0000259.1	0.15	Polyketide	prodigiosin	Serratia marcescens
BGC0000413.1	0.15	NRP	pyoverdin	Pseudomonas protegens Pf-5

Reference

Aggregated

Similarity score

Type

Compound(s)

Organism

BGC0000207.1

0.42

Polyketide

chartreusin

Streptomyces chartreusis

BGC0000599.1

0.40

RiPP

thuricin CD α, thuricin CD β

Bacillus thuringiensis

BGC0001555.1

0.15

RiPP

colicin V

Escherichia coli chi7122

BGC0000259.1

0.15

Polyketide

prodigiosin

Serratia marcescens

BGC0000413.1

0.15

NRP

pyoverdin

Pseudomonas protegens Pf-5

Identified secondary metabolite regions using strictness 'relaxed'

Legend:

Legend: