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Overview
1.1
1.2
1.3
1.4
1.5
1.6
1.7

### Identified secondary metabolite regions using strictness 'relaxed'

c00001_NZ_JAWX.. (original name was: NZ_JAWXXP010000001.1)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 1.1 | betalactone | 127,165 | 158,400 | fengycin | NRP | 20%
Region 1.2 | RiPP-like | 1,165,772 | 1,176,614 |
Region 1.3 | arylpolyene,resorcinol | 2,250,997 | 2,303,852 | APE Vf | Other | 45%
Region 1.4 | betalactone | 4,677,188 | 4,706,059 | meilingmycin | Polyketide | 2%
Region 1.5 | NAGGN | 4,919,496 | 4,934,397 | pyoverdin | NRP | 2%
Region 1.6 | siderophore | 5,041,879 | 5,053,741 | putrebactin / avaroferrin | Other | 30%
Region 1.7 | redox-cofactor | 5,311,272 | 5,333,502 | lankacidin C | NRP + Polyketide | 13%

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 1.1 | betalactone | 127,165 | 158,400 | fengycin | NRP | 20%
Region 1.2 | RiPP-like | 1,165,772 | 1,176,614 |
Region 1.3 | arylpolyene,resorcinol | 2,250,997 | 2,303,852 | APE Vf | Other | 45%
Region 1.4 | betalactone | 4,677,188 | 4,706,059 | meilingmycin | Polyketide | 2%
Region 1.5 | NAGGN | 4,919,496 | 4,934,397 | pyoverdin | NRP | 2%
Region 1.6 | siderophore | 5,041,879 | 5,053,741 | putrebactin / avaroferrin | Other | 30%
Region 1.7 | redox-cofactor | 5,311,272 | 5,333,502 | lankacidin C | NRP + Polyketide | 13%

No secondary metabolite regions were found in these records:
  c00002_NZ_JAWX.. (original name was: NZ_JAWXXP010000002.1)

Compact view
c00001_NZ_JAWX.. - Region 1 - betalactone
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 127,165 - 158,400 nt. (total: 31,236 nt) Show pHMM detection rules used
betalactone: (HMGL-like and AMP-binding)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | betalactone | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0001440.1 |  | 0.26 | Other | cystargolide A, cystargolide B | Kitasatospora cystarginea
BGC0001983.1 |  | 0.26 | Other | triacsins | Kitasatospora aureofaciens
BGC0000890.1 |  | 0.25 | Other (Aminocoumarin) | pentabromopseudilin | Pseudoalteromonas phenolica O-BC30
BGC0000891.1 |  | 0.24 | Other (Aminocoumarin) | pentabromopseudilin | Pseudoalteromonas luteoviolacea 2ta16
BGC0001730.1 |  | 0.22 | Polyketide | paramagnetoquinone 1, paramagnetoquinone 2 | Actinoallomurus sp.
BGC0002016.1 |  | 0.21 | Polyketide | lugdunomycin | Streptomyces sp. QL37
BGC0000261.1 |  | 0.21 | Polyketide | R1128 | Streptomyces sp. R1128
BGC0000495.1 |  | 0.20 | RiPP | actagardine | Actinoplanes garbadinensis
BGC0000234.1 |  | 0.20 | Polyketide | jadomycin | Streptomyces venezuelae ATCC 10712
BGC0000236.1 |  | 0.20 | Polyketide | kinamycin | Streptomyces murayamaensis

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0001440.1 |  | 0.60 | Other | cystargolide A, cystargolide B | Kitasatospora cystarginea
BGC0001983.1 |  | 0.60 | Other | triacsins | Kitasatospora aureofaciens
BGC0000890.1 |  | 0.58 | Other (Aminocoumarin) | pentabromopseudilin | Pseudoalteromonas phenolica O-BC30
BGC0000891.1 |  | 0.58 | Other (Aminocoumarin) | pentabromopseudilin | Pseudoalteromonas luteoviolacea 2ta16
BGC0001730.1 |  | 0.55 | Polyketide | paramagnetoquinone 1, paramagnetoquinone 2 | Actinoallomurus sp.
BGC0002016.1 |  | 0.54 | Polyketide | lugdunomycin | Streptomyces sp. QL37
BGC0000261.1 |  | 0.53 | Polyketide | R1128 | Streptomyces sp. R1128
BGC0000495.1 |  | 0.53 | RiPP | actagardine | Actinoplanes garbadinensis
BGC0000234.1 |  | 0.53 | Polyketide | jadomycin | Streptomyces venezuelae ATCC 10712
BGC0000236.1 |  | 0.53 | Polyketide | kinamycin | Streptomyces murayamaensis

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
c00001_NZ_JAWX.. - Region 2 - RiPP-like
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1,165,772 - 1,176,614 nt. (total: 10,843 nt) Show pHMM detection rules used
RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

No matches found.

No matches found.

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
c00001_NZ_JAWX.. - Region 3 - arylpolyene,resorcinol
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 2,250,997 - 2,303,852 nt. (total: 52,856 nt) Show pHMM detection rules used
arylpolyene: (APE_KS1 or APE_KS2)
resorcinol: DarB

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | arylpolyene | resorcinol | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | --- | ---
BGC0001723.1 |  |  | 0.45 | Polyketide | oviedomycin | Streptomyces antibioticus
BGC0000234.1 |  |  | 0.45 | Polyketide | jadomycin | Streptomyces venezuelae ATCC 10712
BGC0000228.1 |  |  | 0.44 | Polyketide | granaticin | Streptomyces violaceoruber
BGC0000248.1 |  |  | 0.42 | Polyketide | naphtocyclinone | Streptomyces arenae
BGC0000272.1 |  |  | 0.42 | Polyketide | spore pigment | Streptomyces collinus
BGC0000194.1 |  |  | 0.40 | Polyketide | actinorhodin | Streptomyces coelicolor A3(2)
BGC0000891.1 |  |  | 0.37 | Other (Aminocoumarin) | pentabromopseudilin | Pseudoalteromonas luteoviolacea 2ta16
BGC0001526.1 |  |  | 0.37 | Other | bartolosides E, bartolosides F, bartolosides G, bartolosides H, bartolosides I, bartolosides J, bartolosides K | Synechocystis salina LEGE 06099
BGC0000221.1 |  |  | 0.37 | Polyketide | erdacin | uncultured soil bacterium V167
BGC0000890.1 |  |  | 0.37 | Other (Aminocoumarin) | pentabromopseudilin | Pseudoalteromonas phenolica O-BC30

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0001723.1 |  | 0.58 | Polyketide | oviedomycin | Streptomyces antibioticus
BGC0000234.1 |  | 0.56 | Polyketide | jadomycin | Streptomyces venezuelae ATCC 10712
BGC0000228.1 |  | 0.55 | Polyketide | granaticin | Streptomyces violaceoruber
BGC0000194.1 |  | 0.55 | Polyketide | actinorhodin | Streptomyces coelicolor A3(2)
BGC0000248.1 |  | 0.54 | Polyketide | naphtocyclinone | Streptomyces arenae
BGC0000889.1 |  | 0.54 | Other | bagremycin A, bagremycin B | Streptomyces sp. WK-5344
BGC0000272.1 |  | 0.54 | Polyketide | spore pigment | Streptomyces collinus
BGC0000261.1 |  | 0.53 | Polyketide | R1128 | Streptomyces sp. R1128
BGC0002008.1 |  | 0.52 | Other | aryl polyenes | Xenorhabdus doucetiae
BGC0000246.1 |  | 0.52 | Polyketide | mithramycin | Streptomyces argillaceus

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
c00001_NZ_JAWX.. - Region 4 - betalactone
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 4,677,188 - 4,706,059 nt. (total: 28,872 nt) Show pHMM detection rules used
betalactone: (HMGL-like and AMP-binding)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | betalactone | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0001399.1 |  | 0.20 | NRP | fellutamide B | Aspergillus nidulans FGSC A4
BGC0000451.1 |  | 0.17 | NRP | turnerbactin | Teredinibacter turnerae T7901
BGC0000312.1 |  | 0.16 | NRP | bassianolide | Beauveria bassiana
BGC0000259.1 |  | 0.16 | Polyketide | prodigiosin | Serratia marcescens
BGC0001733.1 |  | 0.15 | RiPP | PcpA | Pleurocapsa sp. PCC 7327
BGC0000003.1 |  | 0.15 | Polyketide | AF-toxin | Alternaria alternata
BGC0001465.1 |  | 0.15 | Other | bromopyrroles/bromophenols | Marinomonas mediterranea MMB-1
BGC0000207.1 |  | 0.15 | Polyketide | chartreusin | Streptomyces chartreusis
BGC0000706.1 |  | 0.14 | Saccharide | kanamycin | Streptomyces kanamyceticus
BGC0001149.1 |  | 0.14 | NRP, Saccharide | brabantamide A | Pseudomonas sp. SHC52

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0001399.1 |  | 0.52 | NRP | fellutamide B | Aspergillus nidulans FGSC A4
BGC0000451.1 |  | 0.48 | NRP | turnerbactin | Teredinibacter turnerae T7901
BGC0000312.1 |  | 0.46 | NRP | bassianolide | Beauveria bassiana
BGC0000259.1 |  | 0.46 | Polyketide | prodigiosin | Serratia marcescens
BGC0001733.1 |  | 0.46 | RiPP | PcpA | Pleurocapsa sp. PCC 7327
BGC0000003.1 |  | 0.45 | Polyketide | AF-toxin | Alternaria alternata
BGC0001465.1 |  | 0.45 | Other | bromopyrroles/bromophenols | Marinomonas mediterranea MMB-1
BGC0000207.1 |  | 0.44 | Polyketide | chartreusin | Streptomyces chartreusis
BGC0000706.1 |  | 0.44 | Saccharide | kanamycin | Streptomyces kanamyceticus
BGC0001149.1 |  | 0.44 | NRP, Saccharide | brabantamide A | Pseudomonas sp. SHC52

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
c00001_NZ_JAWX.. - Region 5 - NAGGN
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 4,919,496 - 4,934,397 nt. (total: 14,902 nt) Show pHMM detection rules used
NAGGN: ((TIGR03104 or cds(GATase_7 and Asn_synthase)) and TIGR03103 and (TIGR03106 or Peptidase_M42))

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | NAGGN | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0001356.1 |  | 0.22 | RiPP | paeninodin | Paenibacillus dendritiformis C454
BGC0001496.1 |  | 0.20 | RiPP | actinokineosin | Actinokineospora spheciospongiae
BGC0000885.1 |  | 0.19 | Other | 4-hydroxy-3-nitrosobenzamide | Streptomyces murayamaensis
BGC0000846.1 |  | 0.18 | Other | tabtoxin | Pseudomonas syringae
BGC0000528.1 |  | 0.16 | RiPP | michiganin A | Clavibacter michiganensis subsp. michiganensis NCPPB 382
BGC0002015.1 |  | 0.16 | RiPP | aborycin | Streptomyces sp. ZS0098
BGC0001921.1 |  | 0.16 | Other | MS-271 | Streptomyces sp.
BGC0000937.1 |  | 0.15 | Other | fosfazinomycin A | Streptomyces sp. WM6372
BGC0000616.1 |  | 0.15 | RiPP | amylocyclicin | Bacillus velezensis FZB42
BGC0000703.1 |  | 0.15 | Saccharide | kanamycin | Streptomyces kanamyceticus

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0001356.1 |  | 0.55 | RiPP | paeninodin | Paenibacillus dendritiformis C454
BGC0001496.1 |  | 0.52 | RiPP | actinokineosin | Actinokineospora spheciospongiae
BGC0000885.1 |  | 0.51 | Other | 4-hydroxy-3-nitrosobenzamide | Streptomyces murayamaensis
BGC0000846.1 |  | 0.49 | Other | tabtoxin | Pseudomonas syringae
BGC0000528.1 |  | 0.47 | RiPP | michiganin A | Clavibacter michiganensis subsp. michiganensis NCPPB 382
BGC0002015.1 |  | 0.46 | RiPP | aborycin | Streptomyces sp. ZS0098
BGC0001921.1 |  | 0.46 | Other | MS-271 | Streptomyces sp.
BGC0000937.1 |  | 0.46 | Other | fosfazinomycin A | Streptomyces sp. WM6372
BGC0000616.1 |  | 0.46 | RiPP | amylocyclicin | Bacillus velezensis FZB42
BGC0000703.1 |  | 0.45 | Saccharide | kanamycin | Streptomyces kanamyceticus

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
c00001_NZ_JAWX.. - Region 6 - siderophore
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 5,041,879 - 5,053,741 nt. (total: 11,863 nt) Show pHMM detection rules used
siderophore: IucA_IucC

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
Click on an accession to open that entry in the MIBiG database.
Analysis type:

Reference | siderophore | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000941.1 |  | 0.28 | Other | desferrioxamin B | Streptomyces griseus subsp. griseus NBRC 13350
BGC0001572.1 |  | 0.27 | Other | desferrioxamine E | Pantoea agglomerans
BGC0001453.1 |  | 0.27 | Other | desferrioxamine | Streptomyces argillaceus
BGC0001478.1 |  | 0.24 | Other | desferrioxamine E | Streptomyces sp. ID38640
BGC0000940.1 |  | 0.22 | Other | desferrioxamin B, desferrioxamine E | Streptomyces coelicolor A3(2)
BGC0001713.1 |  | 0.21 | Other | ochrobactin | Ochrobactrum anthropi
BGC0001531.1 |  | 0.21 | Other | bisucaberin B | Tenacibaculum mesophilum
BGC0000295.1 |  | 0.17 | NRP | acinetoferrin | Acinetobacter haemolyticus
BGC0000244.1 |  | 0.16 | Polyketide | macrotetrolide | Streptomyces griseus subsp. griseus
BGC0000942.1 |  | 0.15 | Other | petrobactin | Bacillus anthracis str. Ames

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000941.1 |  | 0.62 | Other | desferrioxamin B | Streptomyces griseus subsp. griseus NBRC 13350
BGC0001572.1 |  | 0.61 | Other | desferrioxamine E | Pantoea agglomerans
BGC0001453.1 |  | 0.60 | Other | desferrioxamine | Streptomyces argillaceus
BGC0001478.1 |  | 0.57 | Other | desferrioxamine E | Streptomyces sp. ID38640
BGC0000940.1 |  | 0.55 | Other | desferrioxamin B, desferrioxamine E | Streptomyces coelicolor A3(2)
BGC0001713.1 |  | 0.54 | Other | ochrobactin | Ochrobactrum anthropi
BGC0001531.1 |  | 0.53 | Other | bisucaberin B | Tenacibaculum mesophilum
BGC0000295.1 |  | 0.48 | NRP | acinetoferrin | Acinetobacter haemolyticus
BGC0000244.1 |  | 0.46 | Polyketide | macrotetrolide | Streptomyces griseus subsp. griseus
BGC0000942.1 |  | 0.46 | Other | petrobactin | Bacillus anthracis str. Ames

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
Selected features only
Expand to show all names
Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
Selected features only
Expand to show all names
c00001_NZ_JAWX.. - Region 7 - redox-cofactor
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
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Location: 5,311,272 - 5,333,502 nt. (total: 22,231 nt) Show pHMM detection rules used
redox-cofactor: (cds(PF04055 and (TIGR04085 or SPASM)) and (TIGR02111 or TIGR03966) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]))

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
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Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
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MIBiG comparison
KnownClusterBlast
Pfam domains
TIGRFAM domains
Similar gene clusters
Shows careas that are similar to the current region to a reference database.
Mouseover a score cell in the table to get a breakdown of how the score was calculated.The MIBiG database.
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Analysis type:

Reference | redox-cofactor | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000574.1 |  | 0.19 | RiPP | caulosegnin I, caulosegnin II, caulosegnin III | Caulobacter segnis ATCC 21756
BGC0001441.1 |  | 0.16 | Other | belactosin A, belactosin C | Streptomyces sp.
BGC0001120.1 |  | 0.15 | NRP, Polyketide | burkholderic acid | Burkholderia thailandensis E264
BGC0001925.1 |  | 0.14 | Alkaloid | altemicidin, SB-203207, SB-203208 | Streptomyces sp.
BGC0000703.1 |  | 0.14 | Saccharide | kanamycin | Streptomyces kanamyceticus
BGC0000840.1 |  | 0.14 | Other | xanthomonadin I | Xanthomonas oryzae pv. oryzae
BGC0000906.1 |  | 0.13 | Other | heme D1 | Heliophilum fasciatum
BGC0000874.1 |  | 0.13 | Other | blasticidin S | Streptomyces griseochromogenes
BGC0000897.1 |  | 0.12 | Other | dehydrophos | Streptomyces luridus
BGC0001739.1 |  | 0.11 | Other | phosphonoacetic Acid | Streptomyces sp. NRRL F-525

Reference | Aggregated | Similarity score | Type | Compound(s) | Organism
--- | --- | --- | --- | --- | ---
BGC0000574.1 |  | 0.51 | RiPP | caulosegnin I, caulosegnin II, caulosegnin III | Caulobacter segnis ATCC 21756
BGC0001441.1 |  | 0.47 | Other | belactosin A, belactosin C | Streptomyces sp.
BGC0001120.1 |  | 0.45 | NRP, Polyketide | burkholderic acid | Burkholderia thailandensis E264
BGC0001925.1 |  | 0.44 | Alkaloid | altemicidin, SB-203207, SB-203208 | Streptomyces sp.
BGC0000703.1 |  | 0.43 | Saccharide | kanamycin | Streptomyces kanamyceticus
BGC0000840.1 |  | 0.43 | Other | xanthomonadin I | Xanthomonas oryzae pv. oryzae
BGC0000906.1 |  | 0.41 | Other | heme D1 | Heliophilum fasciatum
BGC0000874.1 |  | 0.41 | Other | blasticidin S | Streptomyces griseochromogenes
BGC0000897.1 |  | 0.40 | Other | dehydrophos | Streptomyces luridus
BGC0001739.1 |  | 0.38 | Other | phosphonoacetic Acid | Streptomyces sp. NRRL F-525

Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
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Detailed Pfam domain annotation
Shows Pfam domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description. Domains with a bold border have Gene Ontology information.
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Detailed TIGRFAM domain annotation
Shows TIGRFAM domains found in each gene within the region. Click on each domain for more information about the domain's accession, location, and description.
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